Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_033298.3
- Aligned Length:
- 2238
- Identities:
- 152
- Gaps:
- 2067
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTCCACCGCCTCCATCGCCGGTTGTGTTCGCAAGAGGCGACCTCAGTTTCCCAGGTGGCGCTGCGGCAGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCCAAAGTCGGACTTTCAAAACCAACCCGAAGTTTTGAACCCGGCGGCGGCAGTTGTCACTGGCACAGGTTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGTGGTGGCGCCAGTGTACTACTTCTGGGGAGGTCTCAACCAGGTTCTGGCACCTTCAATCCCCACCTGATAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCGTATCATCACGGTATCCCGCTTTTCCCCCAGTTCCCCAAGAGCGTCCTTCCTTTCCCTAGTCACAGGATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGTTTTGGTCTGATAGTGCATCCACCTACCCCAGTGTTGCATCCCCACTTCCCTCTTTCCATCTAACGTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCTTTCCTGGGGATACCTTGGGTATCCCCCGCTAGGAGAGCAAGCACAAGACACCAGGGAGCCAGACCCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGCTCCCCTGCCACAGGATATGAATACGAGCCTCAGCTGGTTTGAGCAGCTGGATGTGCTTCTCAACGCTACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATGGAAATGTGGTCCGGAATAAGCAGTGGCTGTATCCTCTTGGGGTCTCCACAGAGCTCATTGGCCTGTGCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGTTTCTTCTGTAGCAGTGGCTGTATCTTCTTGGGGTCTCCACCGCAGAATAGCACTGCTGTCACTCCTGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCTGTGGGAGGAGTCAGAGATTATGCAGAAGGAATTGAAGTTGCTGCAGTACCAGTTGAGCCAGCACCAGGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGCTGCTGAAACAGCTGGCTGAGGGACGACAGGCTCAGGTTGGCAGTTGGAAGGATCTCCATTCATGTTGTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATCTAAGCTGCCTCTGCCCACTACCTTCACCATGTCTGTTTCTTCATCCAGCTCTTAATTCAGTCTTCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGTAACAGTAGCTGGGAACTTTTATGGAAGCCAGATCCCCAGAGGAGCACCCTTTCTAACCTGGAGCCCAGCAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTTCAGCTCCATGCCCAGAGTCTTAAGCAAGAGGACCTATTCCTTTGGGGCCCCAAAATGCTCCTGAATGACC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTAAGGACTCGTTAAGAATAGTAGGATGAAGGCTTCTTTGCCCACCCTCCCCTCCAAGGCCCTGTTTCTGGGC 1110
Query 1 --------------------------------------------------------------------ATGCAG 6
||.|
Sbjct 1111 TGCCCGCCCCTACCTTCTTGAAGTAGCTATTATCTGTCTTATCTACTGAGGCTTTTCACTGCCTGCCCATCC-- 1182
Query 7 TGG--CGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGT 78
|.| |.||||||||||||||||||||||||..|||||||||||||||.|||.||.||||||.||||||..|||
Sbjct 1183 TTGCCCCCCATCTCAGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTGTCCTGCCTCAGCCTCCCAAGT 1256
Query 79 AGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTG 152
|||||||||||||||.|||.| |||||||||||||||||||.|||||.|||||||||||.||
Sbjct 1257 AGCTGGGATTACAGGTGTGCG-------------CTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATG 1317
Query 153 TTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------------- 186
||||||||.|||||||.|||||.|||||||||||
Sbjct 1318 TTGGCCAGTCTGGTCTTGAACTTCTGACCTCAAGTGATCTGCCCGCCTCGCCCTCCCAAAGTGCTGGGATTACA 1391
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1392 GTTGTGAGCCACCATGCCCAGCCTATAGCTGTACCTTCTGAGTGCAAGCTCAGTTGAACTTGGAAAGTAATGGG 1465
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1466 AGTTCCCATTCTGGTGAGTAGAATGAGGTAGGACACTGCTCTAGGGCAGTAGTGCTGGGGGATGCAAAGGAGGA 1539
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1540 TGAGATATTCTGGTGGGACTTGGATCTGGACAGTAGGAGGCTACCTTTCCTCATCTCCAGCTTCTGCCTTTTTT 1613
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1614 TTTTTTTTTTTTGAGGCAAGGTCTTACTCAGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCA 1687
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1688 GCCTCCGCTTCCTGTACTAAAGCAATCCTCCCACCTTAGCCCCCCAAGTAATAATATATGGGACTACAGGCACA 1761
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1762 CGCTATCATGCCTGGCTAATTTTTAAATATTTTTTGTAGAGACAGGTTTTCACCATGTTGCCCAGGCTGGTCTC 1835
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1836 GAACTCCTGGGCTCAACTGATCCACCAACTTTGGCCTCCCAAAGTGTTCAGATTACAGGTGTGAGCTGCTACCA 1909
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1910 TGCCTAGCCCCAGCTTCTACTGCTTGAGGCTCTCTTTGGCATCTCCACACATCATCCTTAGCAGCCCAGACTGC 1983
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1984 ATTTCTGTAGCAGCCTCTTCCCTGGTCTCTTCTTTCAGTCTCTCTGCCTCTAATCCAGTGGCTTTAAGAATTTT 2057
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2058 TTGGCTGTGACTTCCAGTAAGAAATACAATTTACATTGTGACCTAGTAAATATGTGTGTAGATTTATTAACTGA 2131
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2132 AATAAAAATGTTATGATTTAATTTTTATCCTTAGTGGGAGTGATACACTGATATTTTCTATTATATTTCATTAA 2205
Query 187 ------------------ 186
Sbjct 2206 AAAATGCCTTGTGACTAA 2223
