Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_034072.1
- Aligned Length:
- 3195
- Identities:
- 160
- Gaps:
- 3012
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGGAAGGGCGGGTCAGCGCGCCGGCGCAGTGCGGCGGTCACAGGCTGAGTGCTGCGGCGCGATCCTTGCTTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGCGTTGGCCCGGGAGGAAAGAAGATGGTGCTGGATCTGGATTTGTTTCGGGTGGATAAAGGAGGGGACCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCTCATCCGAGAGACGCAGGAGAAGCGCTTCAAGGACCCGGGACTAGTGGACCAGCTGGTGAAGGCAGACAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGAGTGGCGACGATGATCAAAGGCTTCTCCTGAGACTGCGTCACTTCTGCAACACAGTAGATTCATTCCTTCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATCGGAAGCATTTCGGGGCGTTGGAGGCCGCTCTTGGCCAAAATAAATGACCCTGAAGCTTTTCGGAAGGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCCCCGACCTATGGGCATACCTTTAAGAATTAGAAAAGTCTTTTCCGTGGTAGATCAAACGCGAGGGGAGTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAGGCGAGCAAAAGATTGTAATGACTGAAGCTGTTTAATTGTGATTTGTGGACGTTTTCCTTTAAAGACATTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCAGAGTTGGGCTAGAACCTGGAACTGCCGGATCTTGGAGTCATATCGGGCATCTATCATGAAGCCGAATAAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCATAGAACCATCTGCCCATAAATCTCTGCCTGTATTAACTGGAGTGGTCGCTGGTTGGGCGGATGCTGTCAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TACTTGTGATTTGATTTGTCTGATGCAATAGGTCTGCAACCATCTGGGAGCTAGGTCGATGACAGTACACTGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGGCAGCCACTATCCAAGAGTGTGATGGATTTCTATTAGGAAAATTGATTTTCTCCTGTTTATAAGGATCTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GATGTCAAAAGAATATTTGTTTAACTTGAGTTTTGTGCTGATTCTATGTCTTAGGCCCTCTATTGTAGTAGTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTTGATTGTGAGATTCCACACTTGACCTGAAGTTTCGAGTTGCAATGGAATTTAATTTTGCCACATTTTTTGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTAGGATAAAACTAGCCTGAGCACTGTTCTACTGAATCTGAAGTCAGGAGTATCAGATTTTTGTGTCAGTCCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCTTAGCCAGTGCTAAATGACTTTGAATGTGTTAGCTAGTCTTTTGGGTATAATGTCCACATCTGAGGGATTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCCCTTATCTGAAAAGTAGATAGGTGGTGAGTTCTTCAGGGACAAGGATTCAATTTTATTCATACAGTATATA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGGATATACATATACACATTTATACATAAAATCCCAGTACCTAGCACTGTACCTGGTCCTTGGTAAGGCCTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GATAAAGGTTTGTTAGAGGCGTGAATATTTTCTGTCTTCAGGGCACTTTATATTCTTTATGAAAAGCAGTTTAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTAGTTTATGTTATTGTTTTAAAAAACTTAATCCTAAATGTGAAGTCATTTCTTTTCTTTGTTTTGTTTTGTTT 1406
Query 1 ----------------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTC 34
.|||||||||.|||||||.|||||||||||||||
Sbjct 1407 TGTTTTTGAGACGGAGTCTCTCATTATCACCCAGATTGGAGTGCAGTGGCACCATCTCGGCTCACTGCAACCTC 1480
Query 35 CATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACAC 108
||||||||.|.||||||.||||.||.||||||.|||||| .|||||||||||.||||||.|||..||||.||||
Sbjct 1481 CATCTCCCGGTTTCAAGAGATTATCATGCCTCAGCCTCC-AAGTAGCTGGGACTACAGGTGTGCACCACCACAC 1553
Query 109 TCAACTAATTTTTGTATTTTTAGGAGAGACGGG-GTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACC 181
.||.|||||||| |.|||||||..||||.||| ||||||||.|||||||||||||||||||.|||||||||||
Sbjct 1554 CCAGCTAATTTT--TTTTTTTAGTTGAGATGGGAGTTTCACCATGTTGGCCAGGCTGGTCTCTAACTCCTGACC 1625
Query 182 TCAAG--------------------------------------------------------------------- 186
|||||
Sbjct 1626 TCAAGTGATCCGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGCCTGGCCAATAGT 1699
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1700 TTATTTCCAATGCATCTATTAATTTGATTCTTTTCTATTTGACAACCCTTTCCAATATTCTCTTTGCATCCAAA 1773
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1774 TGGAATTTATGTTTTTTCCCAAGTTCCCAACTGCCCAAGGTAGACACTGGCAGATTTATATCAAGGTTCTTTGA 1847
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1848 CATCTTGAACTTCAGATCAGAGGATGGAGTTCTTCTCTCATTGCCTTGAGCAAGGGCTTATAACCAGAGCCACA 1921
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1922 TTAAGAACTCAGATCATGCTCCCTAATTGAGGACACATAGCAAGCTTCACCAAGCCCTCCACTACAACTATACC 1995
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1996 AATTTGTCTTCCTGTAGACTTACAAGGTACCACTAGGGTTCCTTTGGAGAACTCAGGAGTCCAGTATAACTTGG 2069
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2070 AGTGATAATACCACATTGGAACTCACAACTCTTCTAACTCCAGGGATTTGAATGTGATTTCTTCTTTTTAATTC 2143
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2144 AGAGTAGCGTAATGATCCTACACTTGGGCATATTTGTCTTGGCCCCACTCCCAAAGCAAATAGATTTCCATGTA 2217
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2218 ACTGGAAATCTGCTGCAAACCCCAAGAATTTTATCCTCCCTCAAAAAGTGCTATCCTGAGTGGTTTTTTTTTTC 2291
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2292 TTTTTACTGTACATTGAAAATTGAAGTTGTTGTTTCCTTTTTTTTTAATTTGAGACAAGGTCTCACTGTGTCAC 2365
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2366 CCAGGCATGATCACAGCTCACTGCAGCCTCAATCTCCCCAGGCTCAGATGATCCTCCTGCCTTAGACTTCTGAC 2439
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2440 TAGCTGAGACTACAGGCGCAATGCCACCATGCCTGGCTAATGTGTGTATTTTTTGTAGAGATGGAGTTTCGTCA 2513
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2514 TGTTGCCTAGGCTGGCCTCAAACTCCTGGCCTCAAGCGATCCTCCCACCTCGGCCTCCCAAAGTGTTGGGATTA 2587
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2588 CAGGCATGAGTCACCATGCCCAGGCTAAAGCTGTTATTTCCTCATAACCTTTACTGCACATGTTTTAAAACAGG 2661
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2662 TCCTTATCATTGTTTGCCCCAGCAACTGGAATAGCTTTCTATCTGCTTTCAATCTTAACCCAGTCTCACCAGGG 2735
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2736 CATATAATCTTTCTAGAATGCAAATCTGATCATTTTACTTGAAGGCTTAAGTTTTGCAGTGACATACTTTAGAG 2809
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2810 CAGCACTGTCTGATAGGAATAGAATGTTAGCTTCATGTATACAGATGCTCCTTGACTTAGGATGGGTTTATGTC 2883
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2884 CCAATAAATCCACCATAAGTTGAAAATATTGTAAGTAAAAAATGCATGAAATACACATACCCTACTGAATATCA 2957
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2958 TAGCTTAGCCAAGCCTACCTTAAATGTGCTCAGAACACTGATGTTAACCTACAGTTGGGAAAAATCATCTTACA 3031
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3032 CAAACCCTATTTTATAATAAAGTGTGAATATCTCATGTAATTTATTACTATTGATCATAAAGTTTAAGCATTAT 3105
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3106 AAGTTGGCGATAGTCTGTAATTGTTAATTTGTTTGTATCCAATATAAAAAATATAAAGAGAAACAGATGAAATT 3179
Query 187 ------------- 186
Sbjct 3180 AAAAAAAAAAAAA 3192
