Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15487
Subject:
NR_034089.1
Aligned Length:
4034
Identities:
162
Gaps:
3849

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCGCCCGTTCGCGCTGCCAGCAGCTTCCGCCTGCTACGGTCCTGGCAAGCACCTCGGGATCCCATTCCTTCACA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGACCCTAGCCAGTTAAAGCTGATACATTCCTGTGGGTCAACTATGCAACTAACTCAGATTTTGAGCAAACAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCTCTCAAGTTGGTGATCCTCAGGAGTCTCTGCATTAGTTGGACAGCTCTTCTGGAATTATCTTCTAAGTCAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGTGGGTTGGGTAGGTGGCTCTGCTGATTTTTCGCTGGACTTCCACATTTGGGACGAGTTGGCTGTCATCAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCTAGAAAGGGTGTGGCCGTTTTACATTGGCTGTTTTCCTCACATTCCTCAAGCAGGTACTGTAATAAAGAACT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGAGAAATACAGTCAGATGGGAAGTAGCCCTTGCTGTCAAGGAGCTTGCCATCTAATGGGGGAGACAGGCAAGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAACCAAAGACTACACAGTGCAGTATGGTAAGTGCCATGATTTTGATGTGACAGGGCACAGTGGACGACCTTCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAATCAAAGCAAGTAACTAGGGGTTGACAATGGTAAGTATCATAGTTGAAGTATCCTTGAACAAGGTTTCAGGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGAAGAAGAAGGGAATTTCATGCAGGGAAACAGCCAAAGCTCAGTGAGTCAAAATATCACAGCATTCTTGGTAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCCCAATTGTTTTTTCTGTTTTGCTATTTTGGTGGAGAGAAAGGAACACATAAAGGAATAACATGAGAGAAGGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TATTTGGGGAAGTGTAGTAGTTAAGGTTCTGGCTCAAACAACAACTGCAGCTCATAAAGTTGACTTTAGTGGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGATACTGGGGTATCTCATGGAATCTTGGGAACTGTTGAATAACCAGGGAAACTCTGGGAAACTCACTGGTAGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AATCCATAAACTGTCCTCCTGGTGGGCTGTAAACAACTCACCCTCTATGCATCTCACATCAAAATTCCAGTTTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTGGGAAAACAAGTCTGTTTGCCCAATTTGGGTCATATTTCCACGTCCATGTTACTCAGGCATGATTCATCTGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAGTTATGTGTATAGATATTTTGCTACTGTTCCACCCTTACGCTGTGCTGGGGAGGGAGGTGTCACTGTGAGCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTGTCGGTGCCTTAAGAGATATCTGTTGTGTCTTATTACTTGGTTGCTTTTCCCCACATGTACAATGACAAAAA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGCCTTCAACCTATTTGATCCAGCCGTTCCAGTACAACTCCTATACTTGCCATCTTTCCAAGCCCAAAGGTACA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCCAGCTGATGGAAGGAGCATCTTGGTGTTAATATTCTTTTAGTCATGGTCTCTGAAAGTAAAATGTCTATTCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCTAATTCTGGCACAATCTTATCTAGCTATAGTTCCTCATGGTCCTGCACTCCATGGACTAAATTGTAAGTATA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ATTACTACCAATGTACTCTATAAATAACTTTTGGGGCCAGGGTGGCAATAGTTGCTAGAGAGAAAAAAAAAAAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AAGGAAGGAGAAGAAAACAGTGATAGTTCTTATTTTAAAAGGAAAAAAAGAGGCAGGAGGCTCTCTTGAGGCCA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGAGTTTAAGACCAGCCTAGGCAGCATTTCAAGACCCTGTCTCTACTAAAAAGTAAAAAAAAAATTTAGTCAGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CATGGTGGCATGCACCTGTAGTCGTAGCTACTCAGGAGACTGAGGTGGGAGGATTGATTGAGCTCAGGAGTTTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGGCTGCAGTGAGCAATCATCATGCCATTGCACTCCAGCCTGGGCATCAGAGCAAGACCTTGTCTTTTAGGAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AAAAGGCAGGGAAGAGGAATAGGTAATTTTTCAGTGTTCAGACATTCCAGCAATATGTGTGGAGTACTCATTCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CACTACAGTTTATGAGGCCATAGCTAGTATGTATGACTACCCATCCAAGTTTCCCTGCTTACAGTTACTATTCC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AACTGATTGGGGGGCTTTTCCTAATAGAGTGATTTAAGCCTTCATTTTTAGACATCTAAGCCCTTGGTGATCAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CAGCATAAAATGTGACAAATTAAACAAAAGCAAGACAGCACATCAGAGAACAACTCTGAGGTGGAATGATTGGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AACCAATGAATAGTTGTTCAGTAAATGGTTTATATTTTACAGATGATGAAACTGAAACACAAAAAATTTAGATT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AACTCTTAGGTGACAAAGCCAGGATTGAAGCTCATGCGGTCTGGCTCCAGAACAACTCTTCTTCATAGTTACGT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TATACTGCCCCTGCATTGTTGGTATTGAAAAATTTCCTTTCATCTCTGGTAAAAGTCAGCTCTCTAACTACTGC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  ATCTCACAGCTGAACAGATAACTGATACCGTGCTTCCAGAAGATTTTTCTAACAGTGTTTGCAAGCTATAAAAT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AGTGCTTTCACTTAGAAAAGGCTAGACGTGGTGGTTCATGCCTGTAATCCCAGCACTTTGAGAGGCCGAGGCAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CATGCTGGGAGATAAGGATCCAACATAAGACAAACAGTGCTGATGCTTTTGGAAAGCTCATATTCAAGCTGGGG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AGACAAACAACATACAAGTGGCTGTAGCTACCTTCTGCATATGGATATCCAGTTTTCCCAGCACCACTTATTAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGAGACTGTCTTTTCTGCAGTGTATATTCTTGGCACCGTTGTTGAAAATGAATTCATTGTAGGTGTGTGGGTTT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GTTTCTGGGTTCTCTATTCTGTTCAACTTGTCTATGTGTCTGTTTTTATGCCAGTACCGTGTCATTTTAGTTAC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CAGAGCTCTGCAGTATAATTTGAAACCAGGTCATGTGATTCCTCCAGTTTTGTGGTATTAGGATAGGTTTGGCT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATTCTGAGTCTTTTGTGGTTCCATATAAATTTTAGAATTTTTTTTTTCTATTTCTGTGAAGAATGTCATTGGTA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TTTTGATAGGGATTGCGTTGAATCTGTAGATTGCTTTGGGTAGTATGGACATTTTAACAATATTCATTCTTCTA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ATCCATGAACATGGAATACCTTTCCATTTTTTGGTGTCCATTTCAATTTCTTTCATCAGTCTTATACTTTTCAT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TATAGAGATCTTTCACTTCTTGGATTAACTCCTATGTATTTAATTTTACTTGTAGCTATTGTAAATGGGATTAC  3108

Query    1  ------------------------------------------------ATGCAGTGGCGCCATCTCAGCTCACT  26
                                                            .||||.||||||.|.|||||||||||
Sbjct 3109  TTTTTTTTTTTTTTTTGACGGAGTTTCACCCTTGGCATCCAGGCTAGTGTGCAATGGCGCAACCTCAGCTCACT  3182

Query   27  GCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGC  100
            ||||||||||.|||||||||||||||.||||||.||||||.|||||||||||||||||.||||||||.|...||
Sbjct 3183  GCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGC  3256

Query  101  CACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACT  174
            |||.||||.|..|||||||||||||||||||.||||||.||||||||||..|||||.|||||||||||.|||||
Sbjct 3257  CACCACACCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCACGTTGGTCAGGCTGGTCTTGAACT  3330

Query  175  CCTGACCTCAAG--------------------------------------------------------------  186
            ||||||||| ||                                                              
Sbjct 3331  CCTGACCTC-AGATGATCTGCCCACCTCGACCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACTTCCAG  3403

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3404  CAAGGGATTACTTTTTTAATCTCTTTTTCAGATTTTTCACTGTTGGCATATAGAAATCCTACTAATTTTTGTAT  3477

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3478  GTTGATTTTGTATCCTGGAACTTTACTGAATCTGTTTATAATTTGTGTATTTGTTTATAGTAGTTTTTTGGTGG  3551

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3552  ACTCTTTCAGTTTTTCCAAATATAAGATCATATCATTGGCAAACAAGGACAGTTTGATTTCTTCTATTCCAATT  3625

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3626  TGGATGCCTTTATTTCTTTCTGTTGTCTGATTGCTCTAGTTAGGACTTCCAGTACTATGTTGAATAACAGTGAT  3699

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3700  GAAAGTGGGCATCCTTGCCATGTTCCAGATCTTAGAAAAGAGGCTTTCAGTTTTTCACCATTCAGTTTGATACT  3773

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3774  AGCTGTGGCAGCTTCCATGAGAATCACGCAGTTTGAAGAAGCATTTCACTGAAAAATAGGGATTGCTGTTCTGG  3847

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3848  AAAGACAAAACAATTGTCTACAATTCTAAAGAAGAAGTGAACACAATAATTAAATCAATGTTATTCTGGGTCTA  3921

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3922  AAGCTTATATTCTTAATTACTATATTATCCCATCTTAAAATTTTAATTTGGAAATTATATATCTAAATATTATA  3995

Query  187  --------------------------------------  186
                                                  
Sbjct 3996  ATCAATAAAGTTGAACACACATGATGAAGTGTGAAAAG  4033

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