Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15487
Subject:
NR_038460.2
Aligned Length:
2238
Identities:
156
Gaps:
2062

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATAATTCAGCGGCAACGCAGCTGGGGCCTGGCACACAGGGTCCCTGTGATGAGGAGGGGCTGCCCCTGCCGGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCACCAGAGGCTGCCACCAGGGAGAGAGTTACAAGGACCACTTCCGTGGACCTGGCAGGTCCTAGGGCCCCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTAAAATTGTGCCTGGGGAGAGTCCCTGGCGCTGCTCCGGAGGATCATGGAGCCCGACTCTACTCACAGGGGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCACACAGCTTCTGCGGGGCAAGACAGCTGAGGAGCATGTCAGGACAGTGCCATCTGCCACCAAGGCAGCTCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGAGAGTGGGACAGCTGTGAGAGGCGGGACCTGTCCAGGCTCCCTGATGGGCACTCACAGCCCCCTTCACCCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCGAGGCACTTGCCCCAATGAAAACTGAGCAGTTGGACAATCTGATGTCTTGGAGGGTCCAGAGTCTCACTCT  444

Query    1  ---------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTC  59
                           .|||..||||...|||||.||||.||||||.|||||.|||||||||||||||.||||||
Sbjct  445  GTTGCCCAGGCTGGAGTGCGATGGCATGATCTCGGCTCCCTGCAATCTCCACCTCCCAGGTTCAAGCAATTCTC  518

Query   60  GTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAA----------CTAATTTTTGT  123
            .|.||||.||||||||||||||||||||.||||||          ||||.|.|          |||||||||||
Sbjct  519  CTACCTCAGCCTCCTGAGTAGCTGGGATCACAGGC----------ACACACCACCATGCCCGGCTAATTTTTGT  582

Query  124  ATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----------  186
            ||||||||.|||||||||||||||||.|||||||||||||||||||.||||||||||||||||           
Sbjct  583  ATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGACCTCAAGTGATCAGCCTG  656

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  657  CCTCGGGCTCCTAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCATAGGGCATCCTCTTAATTAGA  730

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  731  GTGTGAGGCCTGCGGATATGGGCTGGGGAATAAGTTGATGCTGACAGAAAATAACTTAAACCATTGAAAGGAAC  804

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  805  AGGAAGTAAACAGAAGCAAATATTTACCGAATCCCTGGTGAGAAGGAACTTTCCAAGAATAAAGGGAAGGATGA  878

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  879  GTTCACTTTGACTGTGTGGAAGCTAAATTCTCAGGTGGCTCAAAGGAAAACATCAAGCTAAAAGACAAGAAATG  952

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  953  AGGCGGGTAAATTTTTGACACTAACATGACAAAAAATTAATAGCATTAACACGGCAGGAACTTATCTGAAGCAG  1026

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1027  CAACACCAAGGGCAATGTGAGTGAACTGCAGACAAGGCAACCCGGACGCCATGGGACACGCCACAGAGCAGGCT  1100

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1101  GCCTTGTCCCCACTCTGCCTACATGTGAGACCCACCAGACTCACAGTGAACACATCCCAGCCCCTCCGGCCGGG  1174

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1175  CACCACGGAAGGCCCTCCCTCCTCCACTGAGGGCAGGGATCACAGGGCCAGGTTTTTGTCATCGGACAAGGGGT  1248

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1249  GTCCCAAGTCATGAGATGCTTAACCCATGAATGCCCCCTCTTGGAGTCTATGCTAATTAAACACGTAGAGGGGC  1322

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1323  GGACTTCACTCTGCCAGCTCAGATAATGACCACAGCATATTTATAACCACAAAGAGGTGGAAACAGCTACACTA  1396

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1397  TCCAACAGTGGGGAAATGTTTAAGTCAATGCTGGGAGAGTAACACCATGGACCAGCCCCGAAGAGACATCTGTG  1470

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1471  GTGAGTGAAATGCACGCCATACAAGCCCAGAGAGACTGTGAACTTGGAAGAAAGAATAGGTGCACACAATAAGA  1544

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1545  CTGGGAGGAAATGAACAAACTATCATCGGCCATGAGGTTCTCCTTTACTTACAATAAGTATATGCAGCACAGAC  1618

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1619  ATGAGAAAGGCATTCCTGGAGTGTGAAGCCCAGGGCAAGAGGATGCGGGTGTCCTGAGCAAGCAATAATGCCAG  1692

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1693  CACCTTCTGCAAGGAGCTCTGCTGGGCCACCTCTTGGGCAACAAACCATCCTGGGACATCTTGCAGACAAGGAA  1766

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1767  ACAGGCTTCAGGAGGCAATGGTGCCTCTTGAAGGGCAGGGCACACAGCCACAGGGCCACCTTCTGCATGGCTCC  1840

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1841  CACCGCAGCTGAGTCTCCAAGGAAGCTGGGTTTTTACAGGGGCAGGTCCTCAAGGTGGATACCCCTTTGCTAAA  1914

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1915  GGCTCTGCCCCAGCAACCCACAAGCAGCCACTTGCCCTGGGCTCCAGGCGGCTGCCCTCCCCTTGCTGTCCTCT  1988

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1989  GGACTGTTTAGTATGCAGAAGGACCAGCCCTGCAAGGCCACCATAAATCCTGCCCCTGTCCTACAGCAGATCAA  2062

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2063  TTGCCAATCGGCTCCAAATCCCCTAGATGTCTCAGCAGCTTGGCCCAGCTGTAGGAGCCACGGCCATGGTTGGC  2136

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2137  TCTAGATGCTGCTGGCTATATATATTGAACTTGAAGCATCGGATTACATGTTTGTTCAATAGCAATAAACTCCC  2210

Query  187  ------------------  186
                              
Sbjct 2211  AAAGTTTTATGGGGTCAT  2228

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