Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_133668.1
- Aligned Length:
- 2605
- Identities:
- 160
- Gaps:
- 2419
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGCCGTTGACGGCAGCGGCACGTGAAAGTACCGACCTTTCTGGCCTTTGTGACGGACCTTTGGAGGCGGGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTCAGATTCGTGCGCTCCGGCCTTTCAGTGTCTCTGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACTCTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGATCTCTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACAGGTCTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAGTAGTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGCAGATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATGCTGAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTATGGTGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACCATAAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCATAAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGACCTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCTTGCTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGTTGGAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTGTATAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGCAAGTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAAATAAGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCTTCATGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGTTTGTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAATCACATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTGAGACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTG 1776
Query 1 -----------------------------------------------------------ATGCAGTGGCGCCAT 15
.||||.||||.|.||
Sbjct 1777 GCTTCTTTATTTTCTTTATTTTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCACGAT 1850
Query 16 CTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTA 89
|||.||||||||||||||||..||||||||||||||.|||||||.||.|||.|.||||.|||||||||||||||
Sbjct 1851 CTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTA 1924
Query 90 CAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCT 163
|||||...||||||.|..|.||.|||||||||||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 1925 CAGGCACTTGCCACCATTCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCT 1998
Query 164 GGTCTCGAACTCCTGACCTCAAG--------------------------------------------------- 186
|||||||||||||||||||...|
Sbjct 1999 GGTCTCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACC 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 ATGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTT 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 TTCTTATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACC 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 TGTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAA 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 GGCTTATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGA 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 ATTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAA 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 GATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTA 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 TATAAAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGAAAAAAAAAA 2590
Query 187 --------------- 186
Sbjct 2591 AAAAAAAAAAAAAAA 2605
