Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_134987.2
- Aligned Length:
- 4405
- Identities:
- 162
- Gaps:
- 4219
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGGAGGGCTTCCGCCCGGGTGAGCGCGGGGCTGCTGGGTGACCCGGCTCCTGCTTGCCCCGCAGCCCCGGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCCCACCATGAACGCCAGCGGTTCTGGCTACCCGCTTGCCTCGCTTTACGTGGGCGATCTGCACCCCGACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACCGAGGCCATGCTCTATGAGAAGTTCTCTCCCGCCGGCCCCATCCTGTCCATCCGCGTGTGCCGCGATGTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCACCCGGCGCTCGCTGGGCTACGCCTACATCAACTTCCAGCAGCCCGCGGACGCGGAGCGGGCACTGGACAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATGAACTTTGAGATGCTCAAAGGCCAGCCTATTCGCATCATGTGGTCCCAGCGAGACCCAGGACTTCGCAAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGTGTGGGCAACATCTTCATCAAGAACCTGGAGGACTCCATTGACAACAAGGCTTTATATGATACCTTCTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCTTTGGGAACATCCTCTCTTGCAAGGTGGCGTGTGACGAGCATGGCTCCCGGGGTTTCGGCTTTGTCCATTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGACCCATGAGGCCGCACAGCAGGCCATCAACACCATGAATGGGATGCTGCTGAATGACCGCAAAGTCTTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGTCACTTCAAGTCTCGACGGGAGCGGGAGGCGGAGCTGGGGGCGCGGGCCCTGGAGTTCACCAACATCTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGAAGAACCTCCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCTCTTCTCCCAGTTTGGGAAAATGCTGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGTGAAGGTGATGAGGGACAACAGCGGCCACTCGCGGTGCTTTGGCTTTGTCAACTTTGAGAAGCATGAGGAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCCAGAAGGCCGTGGTCCATATGAACGGGAAGGAGGTGAGCGGGCGGCTGCTGTACGCGGGCCGGGCCCAAAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCGTGGAGCGGCAGAATGAACTGAAGCGCAGGTTTGAGCAGATGAAGCAGGACCGGCTGAGGCGTTACCAGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTGAACTTGTATGTGAAGAATCTGGACGACTCCATTGATGACGACAAACTGAGGAAAGAGTTCTCTCCCTATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAGTAATTACCAGTGCGAAGAAGAGGCGACAAAGGCCGTGACAGAGATGAACGGGCGCATCGTGGGCACCAAGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACTCTACGTGGCACTGGCCCAGCGCAAAGAGGAGCGGAAGGCCATCTTGACCAACCAGTACATGCAGCGCCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCTCCTTTCAGCAGCCCTCCAGCTACTTCCTGCCTGCCAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCCCCAGGTGACGGCCTGCCCGCAACTCCCACCGCAGCCTTCCCCCCTGCCCCAGCAAGGCAGAGCATGAAGAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAGAGTTCTAGGGAAATGGAGGTTTCTAACTTGCTTCTGCCGAGGACTCATTAGGAAGTCTTTGTTTCCCTCTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TATAAAAGGGAGAGATAGTGTTAGTCAAATGGCATTTCCCAGTGAGAGAAGCTCGTGAATGTTGTGCTGAAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACTCTTAATGATCCAGCAAGTTTGGGAAATGCTGCGTTAAGCAAGACCTACATTTTTCCTTCCTCCCTTCCTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCTTCCCTCCCTTCCCTCCCTTCCCTCCCTTCCCTTCCCTTCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTCCTTCCTTCCTTCCTTCGTGGGGTCTCCATGTCACCCAGGCTGGTGAGCAATGGCGTGATCATGGCTCCTTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTTCTTCCCTCCCTTCCTCCCTTCCTCCCTTCCTTCACGGGGTCTCCATGTCACCCAGGCTGGAGAGCAATGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATGATCATGGCTCACTGCAGCCTTGAATTCCTGGGCTTGAGTGATCCTCCCACTGTAGCCTCCTGAGTAGGTGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GACTACAGGTGTGTGCCACCATGCCCAGCTAATTTTTTTGTTTATTTTAAAGAAGGGGTCTCGCCATGTTGCCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGGCTGGTCTCAAACTCCTGGGCTCAAGCAATTCTCCTGCCTTGGCCTCCCAAAGTGCTGGCATTACAGGAGTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCCACCGTCCCCCGCCCTACATTTTTTTAAAAATTAAATTTTTATTTTTTTGGAGACAGAGTCTTGCTCTGTT 2072
Query 1 ------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTG 62
.|||||||.|.||||||..||||.||||||.|||...||||..||||||||.||||||.|||
Sbjct 2073 GCCCAGAATGGAGTGCAGTGACACCATCTTGGCTCGCTGCAAACTCTTCCTCCTGGGTTCAAGTGATTCTTGTG 2146
Query 63 CCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGA 135
||||.||||||.|.|||||||||||||||||.|.|||||||.|||||||.|||| |||||||||||||||.|||
Sbjct 2147 CCTCAGCCTCCCGGGTAGCTGGGATTACAGGTGCGTGCCACCACACTCAGCTAATTTTTTGTATTTTTAGTAGA 2220
Query 136 GACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------- 186
||||||||||||||.||||||||||||||||||.|||||||||||||||||
Sbjct 2221 GACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATGTGCCCTCCTTGACCTCCT 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 AAAGTGCTGGGATTACAGGCATGAGCCACCATGATCGGCCCTAAATTTCTTTACTATCTACACTATTCTACCCT 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 AAGATGCCAATGTCTACTGAGACTCTCCAAAACAGGCACAGATTATCCAGCATTTCCCCAGCTTAGATGGTCAT 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 TTTTTTGTGGGATGCCTGTTAACATCTCCCCTGGATGTTAATGTTCTGAGGAGCATGGTTTGGGAAAGGACCTC 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 GTGGGACTTACAGGAAGTAGAAAGATGTCACCCATTAAAGGCCACCACGGTAAGAACATTCCTCTCCTTTTAGC 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 AGTTGCTTAAGCTGCACAAGTTGGAGTAAGATGTCACCCTTTTTATCCAGGTCATTGGGTTAGCTGACAGGGAG 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 CCAAGATTGAAATCTAAGATCTTTGCCCTGCAGGATTCAGGGCTAATGGACATCCTGAGATGGGAGGAAGGAGC 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 TTTCATTACAGCCTTGTGGGTCTTGACTCACCAGTCCCTGCAGGAGCCAGTGGAGTTCCTGCCATGGTGTCCCT 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 GAGGAGGTGTAGCTTCTCACCTACCCTGCCGCCAAGCCCCTCAGTCTGGGTCTTCTTTTCCCATGCAGCCTCCA 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 GCCCAGGCTGCATACTATGGCTGTGGCCCAGTGACACCCACCCAGCCTGCCCCCAGGTGGACATCCCAGCCACC 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 TAGACCTTCCTGTGAGTGACCCAGCCCCTTCCACTCTCAGACTGGCCTATTGGTGTGGGCCCCGTGAGGCAGTC 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 ATAACACAGGGATGAAACCTGGCTCTGCCACTTCCCAAGGTGGGTGACTTCACTTCTCTGAGCCTCAGTTTCCT 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 CTTCTGAGCATGGGCCTGAATGAGACGTGTGTAAAGTACCAAGCACAGTGGTGAGCCAATGGAAGACACGCAGC 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 TAGCCACCAGCAGTCATCACCAAAGATGCCTCTGATTTGTGACTCTGAAAATTCTTGCAAAGCTGAGAAGGTGA 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 AATTCCTCTGGCTATATTGTTGACCAAAGGCCCTCCTCTGTAAGAGTGAATTGCACGCTCACTTGAAACTATCT 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 TGAGGGACTAAGGTGTACAATCCTGGTGCTTATGCAGTTTGGGGCTCTAGGTAGACACGAGCTGGCTTTGAAAT 3404
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3405 TGTAGATTCCTACACTCCCCCTTTCTGGAGTTCTGGGTCTAAGTGAATTGACTCCTATTTCTGTTGTGAATGTT 3478
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3479 GTAGTTTCCCTTCCCATTCTCTTGGTGGCCCTGGAAGCTTCTAGGCACAGTGTGCCACCCTGATTATTCCCACC 3552
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3553 ACTCCATCCAACTTTTCTCTCTCTGTGGTGTCTGCACCACAAGCTGCCTACCCTCCAGGTGCCTCAATGGTCCG 3626
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3627 GCCACCAGTTGTGCCTCGGCGCCCCCCGGCCCACATCAGCAGTGTCAGGCAGGCCTCCACCCAGGTGCCACGCA 3700
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3701 CGGTGCCTCATACCCAGAGAGTAGCCAACATTGGTACTCAGACCACAGGACCCAGTGGGGTAGGATGCTGTACA 3774
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3775 CCAGGCCGGCCGCTCCTGCCGTGCAAATGTTCCTCAGCAGCACATAGCACCTATCGGGTCCAGGAGCCGGCTGT 3848
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3849 GCACATCCCAGGACAGGAGCCCCTGACCGCGTCCATGCTGGCTGCGGCGCCCCTGCATGAGCAAAAGCAGATGA 3922
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3923 TTGGCACCTGTTATCTTGTCTTAAAACGCTGGTCAGACTGGATGGTCCTGAGCTTTCTTCCACTGCTGCTGTCC 3996
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3997 TGTGACTTTGAGGGGAGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGCTGGCAAGATCACGGGC 4070
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4071 ATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCATGCTGGAGTCTCCAGAATCCCTCCATGCCAAGATAGA 4144
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4145 CGAGGCAGTGGCCGTGCTGCAGGCACACCAGGCTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGAAAA 4218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4219 GGAAATCCTCGCTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCCCTGCAAACTCTAA 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 CTTATTTCCCAATTAGTCTGTATCTATACTTGGGCTCTGTATGTGAATGAAGGTTGGTCACCCATCCAGCCTAT 4366
Query 187 --------------------------------------- 186
Sbjct 4367 TACCTTTTGCTTTGTGTATTAAAAGTGCTGCAAAATCTG 4405
