Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_138025.2
- Aligned Length:
- 6064
- Identities:
- 162
- Gaps:
- 5878
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGGTCCTGAGTCGCGACCCTGGTCCGGACCTGACCTGAATTGCGACCCCAACCTGGACTGCTCCCCTGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCAACCCCTACCCCCGCCCACCAGTATGGCCCGGCACGTGTTCCTAACGGGGCCCCCAGGCCGACTGCAGCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGCCCAGGGCAAAGAGTGTGCGTCATCGATGAGATTGGGAAGATGGAGCTCTTCAGTCAGCTTTTCATTCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGTTCGTCAGACGCTGTCTACCCCAGGGACTATAATCCTTGGCACAATCCCAGTTCCTAAAGGAAAGCCACTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTCTTGTAGAAGAAATCAGAAACAGAAAGGATGTGAAGGTGTTTAATGTCACCAAGGAAAACAGAAACCACCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTGCCAGATATCGTGACGTGCGTGCAGAGCAGCAGGAAGTGAAGACACGTGCATTCCTGCCTTCCGTGAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGCCCAGTTCAAGAGGAGCCTGATGGAGCCCTGCCTGTCGAGGCTGTATGCCTATGGGGTTATGGAACCTTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCTTTTCTAGAGAAAACTCAACAGCTGTTTCCCATAAAATGTTTAAAAGATCAAATTAGCCTTAATGCTGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGTCTGTACAAGATTAACTATCCATTGTGGCTTATCTATGCTTAAAGATTTCTTGTTTATTTCCTCTTGCAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATGCACATGATTTGGGTAAACTGTGAGATGAGAAATGGTTTTCAGAGTATTAGATGGAATTCACCCCCGTTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTTTATAAATGTGTTCAGGGGAAGCGGGAGGAAAGAGTTCACTGCCTAATCAGTTTTGCATGTCATGAAAATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAATTCCTCTCCAGGTGCAGCTTCAGCCTCATGCAACTTAAAGTGATAACAGTTATTTGATTTTTTAAAAAATA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTATTCCAAAAGAAAACCATTTTAGGTCATCTCCCCCAACTCTGTTTGCTTACTGCTTAATAAATATAAAAATA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATCTGATGGTTACAGACAGGAGGCATTGTGTGGGAGGAATACACAACCTTTGGAAGTGTTGATAGCATCTGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATTCAGCCGACCAGATGACAAGAGCTCAGGCCCACGGGTTTGCATAAGAGCACTGCTTTGCCTTAGTTTACTCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAGCAATTTTGAATCTTTCTATGCCTAGTTTCCCTTCCAGAAAAGCAGGAAGTGGCTGTCATCTCAGGAGTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTCACACCACAGAAGGAAACTGTCAACCACTCCACACAACTGTGGAGAGTGCCCAGTGCCAGGGGCTGGGCTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATCAGGAATAATGGTGTAGCAATGCGGAGTTCAGCCCATAACAGGGGTACTATAAAAATGAAGTAGGAAAGTAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGAGACCCCTGAAACCCCAGAACTGATAGAGGATAAAAACTTCCCTCCAAGTGGTAGATGGTACTGGAGTGAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAACAGTTCAGTGTTTTTAGGTCATTTTTGGTGAAGATCTATGAATTTCCAGGATTTTTTTTTAACAAATTAGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATTGGCTACAAACCCACTGGTATAAGCAGCAGTGTGCCTTCTCTCTAACTGTGGACAAGTCGGGCATGTGGCGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGAGGAGCCCTGGGCTGGGCACTGGGGCACAGTGAATGGGGCGGGAGGGGCTCACATCAAAACCAAAATGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CGCAGCCCAGGTCTGGTTCCTCCATCAGTGTCTCTTTCCTCAGCGCTTTTCTTCCGAGGTAACTTTGTGAAGCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGACTTGGACTTGCCTAGCCTTGGAGGGACCACAACAGGGAGGCCTAATAGATTATGAACTAAGCCCTCAAAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCTACCTGCCCAGGAGGAGGAAGTGGGCATCTCCTTCCACAGTCCCTGCCTGGCGGGGCTGTTCAGGGAGACT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAGTTCCGAGCTCAGGATGTCTGGCAGGCTGGCTGTGACTTCCAGCCACCATCACCAGGACACCGGTGTGGGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCATGCCTCAGTGGGCCAGGAGAGGCACGGCCTCTGAGTTGGGTAGAGGCTTCCCACAAAGGCCTGGGAACCTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATCCTGGCCGTAAATCTGAAAGTACCACAGCCCTCAGGAGAACCAAGAGATAGGGAGGCAGGCTGGGGAAATGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATCAATGTGCACCCAGGCGTGGTGGAGCTGGTCAGCCCCAGCTGGAGTGGGACCCCATCAAGATGGAGCCTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCTGGCACCTCCGGGAGGCCGTTTTGCGTTTCCGCCCTTCATGCATCTGAAACACCAAGGGCCATGTTCCTTCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGTGCTTGTCCTTTTGAGCTTGGTGTTTCAGCCGTGTCTGTTTTGTAGACTTTGATTTTGTCTTAAATGAGAAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAAAGCTGGTGAAGGTTATTTCAAAGTTAAATAGCTAGTCTGAGGGGCTTATCACTGAAGCCAGTTGTGCTTAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTGGGGTGGGAGTGTCACTGCCTACTTGAAAGTATGCACTTGTGTGGAACAGATTCAGGGTGGCCCCTAGCACT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGGGGCTGCGGGAGCTTCTGCACACTTTCCCTTTAACGGTAAAGAGACAAGCTTGGAGTGTTTAAGTGGTTCGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCAGGAGCACAGTGATAGCGGTGACAAAGGAGATTTGAACCCACGTCTGCGTGGCTCCAAAGTTCACTCTTTCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCACTCCCTGCTGCGTCCTTCTTGAGGCTTTAGCATTTTTAGTGTGTTTTGTGCCCCCAGACCTCAGAGTTGAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTTAGCAGTGATAAACTGCTGTAAATCCAAAGAACGTTTAGTGTCTCTTGTGGTGAGGTCCTGAAATGATTGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGTATTAGTCAAACAGAATGATCATGGAGCATGTATGGAGATGTCAGATGCAATCCCTGTATTGTAAGGCAATG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACATTTAATGAAGGATAAGATGAATTCACAGATAACTAGAACTCAGGGCCAAACGCACACAGCCTGTAGCAACA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTGTCATGCTGAGATTTAAAGGAAGAAGAGGTGCCGTGGCAGAACTCCACGTGACCGTCCCCTCCCTGCACGCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCCAGGATGAGAGGAGCAGAGCTGAGCGCCACCTCCCTGTCGGTGCCACGGCTGAGGTGAGGAGCTCTTGCCGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATGGTGGGGTGGGGGCAGCAGGGCAGATTGAAGTCAGGGATTCTCTTATACCTGAGTTTGGAATGCCTCCTATT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CAAACAAAGCAAAATATCTAACAGATGGTTGGATATGAGTCTCAGGGAGGAATTCAATTTGAAAAGCACAGAAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TAACATGTATTGCTTATATGAAGAATCTCAGCTAGAATAACAAGGTCGGATGGGAGGAATCAGGACTGATTTGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGCACGATTTACTAAATCATTCTTTCCTTTTCCTCCTTAGCAGATCATACCGCCAGCTGCTTAACACGTAATAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTTAATAAATTGTTTCTTCTTACCTCTCAGTGAGGGTAAGCACATGCAGGGAGATGGGTGAGTCTTTTAAATGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATAGTGTCATCTCTGATGATCAGCCTTGACAGGGAGAGATCCTAGTAAAGCTGCAAATTCAGGCACTCAGTTCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CAGCCCTCCAGTTATCAAGGGGGTGGGAACGCTGGTGGGCTGGAAAATGTGGAACAGACCTGCTCCTCTTCTTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TCCTGCCAATTACCGTATTCATAGAAGGTTGTGTCTGTGGATCACACCTGTGTGTGTGCTGATGGCGGATGCTT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GTGTAGCATAGTGACTTGGGACAAAACAGCATGGTAGATGAGGCTGGAGACGGGTGGGCTAAGTAAACAGGCAT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGCATTGCACATTTTGTGGGCAAAGAAGTTGAAGCATCGCATGATTTTAACAAATTACTTGCCAGATGATTTCA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ACACACTGCAAAATTTAGAATCAATAATGCCAAATTGGCCACATGATTTATATAAAACCAAGTGCTATGGTTTT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AATATTATCTTTAGAGGAGAAACCATTTTGATCTGTGTCCAAATAACTCTTTTTTTTTTTTTTTTTTTTGAGAC 3922
Query 1 ----------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGT 46
.||||||||.||.|||||.||||||||.|||||||..||||..|||
Sbjct 3923 AGAGTCTCACTCTGTCGCTTGAGCTGGAGTGCAGTGGTGCTATCTCGGCTCACTGTAACCTCCGCCTCCTGGGT 3996
Query 47 TCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAA-TTT 119
|||||||||||||.||||||..||||||||||||||||||||||||||....|||||.||.|.||.|||| |||
Sbjct 3997 TCAAGCGATTCTCCTGCCTCAACCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGCCCAGCTAATTTT 4070
Query 120 TTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------- 186
||||||||||||.|||||||||||||||||.|||||||||.||||||||||||||||||||||||.|
Sbjct 4071 TTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAAGCTGGTCTCGAACTCCTGACCTCATGATTTGCC 4144
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4145 TGCCTCAGCCTACAAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCAGCCCCCAAATAACTCTTGAACTG 4218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4219 GAAAATAACTCTTTAGCTATATACTGGCAGAATATTTGAACAACTCTAGCAAGAAATGTCAGTTTAGGGATGCC 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 TCCTCTAAATGGGGGCTTAGAATATAACATTTTGCAGGAAGTCCTTTCTGATACATAGCTGACTAGATGAAGGA 4366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4367 CCAGATTAACAAGTTCATGAGTTGTAAATATAAAAGTTGTGTACCACGATAAAAAAGAAAAAGAAGTATGGCTG 4440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4441 CACTGTTGATGGCTGGTCAAACAGCCCCCAAGAATCCTGGGGTGACTCCAATACTGCCACCTTTTCTCTGTGGG 4514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4515 TGCAGTTGCCTGCGGATGTGTGTGCACATCTGTGCCTCGGTATGCACACTCGAGATGCCCGCTCTCATAGACGG 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 TGCAGAGCGTCACTGCATTCCTATCTGATTAATGTGACCTTAGTGTTGTAGATACACTGTGTCACTTTCATCCT 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 CCCTCCTCCCCACAAAAGATGCCACGAGAACTCGTGAACTGTGATAAGCAATGAACAGAATAACTGTTGAAGAA 4736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4737 GCACCTCATGAACCTCCCCAGAGAAACGGGATGGAGGAGCACCCAGGGTGCTCTTGCTCTCTTGCCTGCGCTGC 4810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4811 CATTTCCTTCCAGCCTGGGTTTCTAGCTCTTTGGGGAGATTCCCCGTTTTGTGGAATGCTTTCTGTGTTTCCTA 4884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4885 CTTCTGGATGCCTAAGGAGTGGCCAGTCATACTCCTGGCTGACCACTGCCAGGCACCGTGGTTTTCCTCACTGA 4958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4959 ACTCAAGGAGTCACCCTCCGTGGGGAGGCCACACTCACAGCTCCAGGCCTGCCATTTAGCCCTTGGGGCTTGGC 5032
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5033 TGTAAAGTTGCCCAAGAGGATTACAGGAGCTGCCAGCCAAGTTTAATTTGGCCACCTTAGAGAACTGCAGCAAG 5106
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5107 GCCCTATCAGCTTCCCATTAGACAAACAACTGCATTTAAATTAAATAAAGTTTGCACCTCTAGGGAGTGCTGAC 5180
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5181 CTGAAAATAAGAACCTTCTGTCTGTGATTATAGAGTACACTTGCTTTTATTAATTGCTGATTCTTAGTTTACAA 5254
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5255 AAAAAAAAATTAGAAAAGCATTACCATTTACTTTCCAAGGGGCAAGAGATTCTCTACAATACCCTTCCCCCAAC 5328
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5329 CCTCTCCTCAAATTTCCAAATCCTAAATACTTTGAAGAAATTTGTGTGACTGTTTAAAATTGAGTATTTCCTTC 5402
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5403 TAACTATTGTCTTTTGAAAAGGGATGGTTCACCAGGCCAGTGATACTCTATGGACTGCATTTTGGGACCTCTAC 5476
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5477 CCCAGCAAGGATACAGGTTCCTGGGGTCTTGAAGATGGGAAAAGTTGTCTCAGAATTTACCCAAATGTCGTTCT 5550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5551 CACCATAAAAGATATACTTGTAGAAATGAGAAGCTTCAGTATAACTCAAAACACTGGACGCAGCAATAACTATA 5624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5625 AACATTTTAATTTCAAAAACAAAGGTGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAA 5698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5699 GCACGCGTCCCTGTGAAGCCCGCAGGGTGCTGGCGGCCCACCAATCGCCTGGACTACAGTGAGGAGCATTGTGT 5772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5773 GACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACATCCTAACGTATCCTGGCTTTTC 5846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5847 ACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAAC 5920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5921 AGCTGCATAAATATTATAAAGAAATAGGGTTTTCTTGACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGA 5994
Query 187 ---------------------------------------------------------------------- 186
Sbjct 5995 TGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGTAACAGTAATGTATAAAGTGCCGATGATGTAA 6064
