Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_146582.1
- Aligned Length:
- 4193
- Identities:
- 154
- Gaps:
- 4018
Alignment
Query 1 ----------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAAC-CTCCATCTCCCAGGTTCAAG 51
.|||||.|||.|.||||..|||||||.|||| || ||||.||||||||
Sbjct 1 TCACTCTGTCACCCAGGCTGGAGTGCAGAGGCACAATCTTGGCTCACTCCAACACT-----TCCCGGGTTCAAG 69
Query 52 CGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCA------ACTAATTT 119
.|||||||.||||||.||||||.|.|||||||||.||||||||....||||| || ||||||||
Sbjct 70 AGATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGGTTACAGGCACACGCCAC------CATGTCTGACTAATTT 137
Query 120 TTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------- 186
||||||||||||.|||.|||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 138 TTGTATTTTTAGTAGAAACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTG 211
Query 187 -------------------------------------------------------------------------- 186
Sbjct 212 TCTGCCTCGGCCTCCCAGAGTGCTGGGATTACAGGTGTGAGCCACTGCATCTGGCCCAGGCTTCTTTTTAAATC 285
Query 187 -------------------------------------------------------------------------- 186
Sbjct 286 AAGTTTTAATTTTTTTCATAATCTAGTTTATATTTTAAAAACATGACTTTGATCTAAACAAGTTCTTTTACATT 359
Query 187 -------------------------------------------------------------------------- 186
Sbjct 360 TTTTTACAAAGTAAAGAGGATCTCCTGCCTCATGGCTGCTACTTCTTTCCAGTAAAAATTAGTCCCTGCGACCT 433
Query 187 -------------------------------------------------------------------------- 186
Sbjct 434 CAATTAAAATAAAATTACCATAAAGATCTACGTTGGGCACAGCTATGTCGTCAAAGCCCTGCTCTGGGTTAAGT 507
Query 187 -------------------------------------------------------------------------- 186
Sbjct 508 GACGAAACACTCGTGATGCTACTACATCAGTGACAAATCCTCAGAAACCACCAGGGAGGGAGGGATGCTGTACG 581
Query 187 -------------------------------------------------------------------------- 186
Sbjct 582 GACTGCGCAGTATCCCCCAAATTCCTCTGCAGAGGCTCACACCCCAAGGTGACTGTCGCTGGAGATAAGGTCTT 655
Query 187 -------------------------------------------------------------------------- 186
Sbjct 656 TAAGGAGGCAATCATGGTAATATGGCAGCTTAAGGGTGGGACCCTCATCCAACAAGACTGGTGTCCTCCTGAGA 729
Query 187 -------------------------------------------------------------------------- 186
Sbjct 730 ACGGAAAAACACTGAAGACCACACACACGGAAAAGACCAGGTGAGGCACAGAATGGGAAGAAGCCAAACCTGCC 803
Query 187 -------------------------------------------------------------------------- 186
Sbjct 804 AGTGCCTTGATCATGGACTCTCAACCTCCAGAACTGTGAGAAAATACGTTTGGGCCTCCCAGTCTGTGGTATTT 877
Query 187 -------------------------------------------------------------------------- 186
Sbjct 878 TGTCGTGGCAGCCCGAGCTGACTAACGTAGGCGCCAAGCCCCTCCAGAGCCACGTGGCACCCGTGGCTGATCAG 951
Query 187 -------------------------------------------------------------------------- 186
Sbjct 952 CCTGCCATGCTGGCAGATCTACCCTGTAGGGCCAAAAATGCTTCTACCTGCAACTGCCCATCAATAACATCTGC 1025
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1026 ATGGCTGTTTGCAGAGGGCAACCAAAGAAGAAAGTTCAGTCCCACTGCACCAACCCAGCTGATGGAACAGAGTC 1099
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1100 CCACATGGCACTCTCCTAAACTGGGCAGCGACGCCACTTACTTCCAGAATACAGGGAAGATTCTGAAGCCTGCC 1173
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1174 GGGGAGCTGAGTGGACCCGCATGCACTCACTCATCCACTCCACAGGCATTTGTCCCAGGGTCTCCAGGTATGAT 1247
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1248 GGGAAGCCAGGGTGCACAGGGCCAGAGGCGACAAACACATTCCTGCCGGGTCCCAGAGAACGGAGGCTGGCCAG 1321
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1322 GAATACGGGCGGCATGAACTACGCTCAGGCTGCAGGTGCCAAGCACTTACACTTGTTTCCTTTGGAGTAAAGCT 1395
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1396 AGAGGAAACAGAGGCTCCAAATTCAAAAGGCTTTCCTGAAAGCACACAGCTAGAAAGAAGCTGCACCAGACTTC 1469
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1470 ACTTGAGGACTCTTCTTAGACATGACATATACTGCCTCTCAACAAGCAGCTGTACTGTGGAGGAGAAAGTAGAA 1543
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1544 AAGTGCCACAAGAGATTTAAAAAAAATAATAATAATGCTCCTGGGCCTGAGACAGGGAAGGAGTACAGCATTTC 1617
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1618 TGTTTTATTTCTGGGGGCTGGGGAGCAGAGCAGAACATTCAGGAAAGACATTCATTCTGCAAGCATTTACTGGG 1691
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1692 GATATACTATTCGCCAGGCATGCATGTAAAAGAGGAGCCACGTGCCCAGAGGGATGGGAAGACAGCACGTTCCA 1765
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1766 ACCATGAAGTCGGGGAGCAGAAGGAAGCACAGGTGAGGGAGAGTCCATGGGAACTGGCGGGCCAGCAGCAGCAG 1839
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1840 CAGCAGCAGCAGCAGCAGCAGCAGCAGAGGAGCCCATGCGGCAGGAACAGGAGCCCATACCTGAGCACTGAGGC 1913
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1914 ACCCAGCCACCTGTCACGATACTCGGAGGACTGGGCTACAGAGGCCGCACACCCCAGCAACCAACTTCTCCCCG 1987
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1988 CTCCTAGCAGGCCCTTAAGTCGCTGTTGCTGAGCTCCCCTCACCCCCTTAAATATCTCTTTCCCACCAAGATGC 2061
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2062 AAAAGGCAACACCATCCTCTAGCATTTGCCCAGCTCTGTGCGTGTTTAATTTCCTTACTATTTGCAAGAAGTCA 2135
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2136 TTCAAAATGTTGACAGCATCTTAACAGTTTGCACATGATATATCTGCACATCTTACAGGTTAGCATCCGTGTCA 2209
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2210 AAAGTCACCAATGAACACATTACAATCTCTCCATTTCCATTCTCTTTTAAAGGCTGCAGAATGTCTGGTTCAAC 2283
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2284 ACTAAGCAGACTTTTTTCCGCAAAATTACAAGGAAACACTGAACAAGGGCAGATGCACAAAATGATACCCATGA 2357
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2358 CGCCTGACAAACAACTCCGTGTTGACAGAACAGCTCGAGGCCCTTCCCCATTCCAGTGGATCAGCGCTGTTATT 2431
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2432 GCCAGCTCAGTATCTACGCCCCTGTCTTTCAGAGAACCTTTTCAGTGTTCCTTTGAGGACCTGCCCTGCTCTTC 2505
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2506 TCTCTGCTGCCACTCTGATGAGGCTGTCCATGAAAGGCCTCCCCTGGCCAAGAAGTGGCAGAATCTGGGCCAAT 2579
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2580 AAACCACTCTCCAGGCAACCCAAGCAGTGCCCTAAATACACAGGCAGCCTGTGCCTGTCCCCTGGGCCCATGGT 2653
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2654 TCAGTCCATCCCAACGCCTCTATGCTCAAAGCCACCCCCACATCCTTCGAATAAAATCCATGTCTGCTTGAGTC 2727
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2728 AGCCAGAATGGGATTCTCATGTTTCCAACCAAGGACCCAAAGAGTCAACTTACCACAGTGCCCAGCTTGAAGGG 2801
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2802 TAAACAAGTTCTGACAGTTCTAAAAGGCAAAGACCATCTGCTTAAGGCAAACATTACCTAAATTTAAGGACTTT 2875
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2876 TTTAATGCCCTAAATTCTGATGGCAACTCCCAAAGAAAAGATTCCCAAAATGGTGGCCATGGCAACCTCAATGG 2949
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2950 CCTGAGTATACAAGCTCCCCAACTGACCAATACGGCTGCAGGCCCCTTCTCTGGGACATGAGTCATTGAACATC 3023
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3024 TGATCTAAACACCAGGTATGTTCCTTGTTGCTACACAGACTGTGCCCTACAAGCCAGAGTCCATCCCGCCTCCC 3097
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3098 TCATGCAGTTAAGCTCCATGGAGCTCTCACCACGTGTCCAGTCCTGGATGAGACACCGGGGTTTGGTTCCTGAG 3171
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3172 CACCTTGAGCCCATGCTGGGGAGAGACGTGCAGCCCACGTCACAGCAAAGTGCACAGGCCACCAGGTGGCAGGC 3245
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3246 CCTGGAATCGCCAGCAGGAGCCATCGGAATGGCCTTGGGGAAGCAGGACTCCTGAGCTGGGTTGTGAAGGCATC 3319
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3320 AGGTGGGTTAAAAGAGGCTTGCCAAGGGGCAGGACTCAGGTGATCCAAACCCCCAGGCAGGGCCCCAGACAGAG 3393
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3394 GAAGTGGCCTGCCAGGAACTGTGAGCCTGGCTGACGGTATCCTCCACAGCGAAGGTGCCACAGGTGGGGTGAGA 3467
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3468 CCAGGCTGGAGAGCAGGCAGGGCCACGGCAAAGGGCCTGGGAGCCCAGCGAGGCAACTCCATTTCCATTTCTTT 3541
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3542 ACTTCCTCCATGACTCCTTCTAAAAAGGCTTAAGGGTGAGGCCAAGGAATTTCAACTTCATTCTAAAAGCCCTA 3615
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3616 GTGAGCTATTTAAAGGCTTAAGCAGGTTGAGGTCTGGGTAAATTTATATTTTGGGATCTATTTATGGGTTAACC 3689
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3690 CAGCTGTCAAACATGAATTGCCACATCAACATTCTCTGAGAGGAGGTATGTGTGTGTGTGTGTGTGTGTGCGCG 3763
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3764 CGCGCACGCGCATGCACTGGCACACACCAAGGTGAGACTCGGGGAAATCGCCTGTGCTCAGTCACGTAAATACA 3837
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3838 GATACATGTGTTCTGTACACATAAACACCCACAGGAAAGATACAGGGGAACGCACAACCTCATCACAAAGCATC 3911
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3912 TCAACAGGAGCCTGGGAGTTATCAAACTGTTAAAACTTGAAAAGCTACAAAATCGCCCTTTATTTGGAAGAGCT 3985
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3986 CAATCATTCTCGGGAGGGTTCAGCGTGGGGGTGCTGTGTGTTGTTGGGTCTTCAGATTTTTTAACTAAGAAAGG 4059
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4060 ACTCCAACCTCATGGACATCATAACGGCAAACCAGTTTCAATGCTTCTAGACCCCATCAAGCACAGCTGGGTGG 4133
Query 187 ------------------------------------------------- 186
Sbjct 4134 TCCTCTATCTGCCAGCCAGAAATGCACCCAATGGAACAGTCCAGGCTCC 4182
