Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_146863.2
- Aligned Length:
- 2586
- Identities:
- 161
- Gaps:
- 2401
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTTCAGCTTTCACCGGCTGGGAGTCCGGAGCTGCAGCAGAGGCCACACCCAGGGCTTGGTGGTCCCGCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGGAGCTCAGCAGGCGCTTGCTGCTTGAACCGGTCAAAGAAGGAACGAATGAATGACCCTTTTGCCAGGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAGACCCGGGGGCCTCAGGGAGCTGCGAATCCCATGGACTCCTCCCGCAGCCTGGGGGACCTCGGGCCTTTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCGGGAGGTAGGGCGCGGGGCTCCGCTAGCTCCGGGCGCCCGGAATCCCGCGACGGCAGGGGCGAGCCGAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGGCGGCGGCCACGAGGACAGAACGGCAGATCGGGCCCTCGGACCTCGGGCCGGGGAGGAATTGGACCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCCTGGGTCAGAGAGAAAGTGCTCTTTCTCCTGCACCCAGAGAGGTGGTTAGGGACTCGAGGGGACCCTGCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGAAGAGGTGGCCGGTGCAGAGGACCTTCCTCATGCGGGTGGAGAGGACCACGGCGAGGAGCCCAACTACCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTGTCTTTCAACGACAAAAGCGAATTTCTGGCAGGCGTGTAGCCCCGCCGCGGGACGCAGCAGACCCACCCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATACGTGCTTGTGCGGGTGGAGGATTATCAGGTAACACAAGAAGTGTTGCAGACCTCCTGGGCCAAGGGTCGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGACCACGAGGACTGAGGAGCACTTCGTGACCGCGCTCACTTTTCGCAGCAGTAGAGAGGGACAGCCTGGGGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTGGGGCCCTGCTGAATCCCGGGCTCTCCAGGCACGAACAGGGGCATCCCGCGTCCACGCCGCGGGGAGGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGTTTCACCGTCTCCAGGGACTTGGCTCGAGGAAATTAAACTCTAATGAGTAGCTCGAGAAATGTTCCGGGATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGGATGAGCGATCATCCTTAAAAGAAAATGCTATTCTGGGAGCTCCAACCTGCAATTAACCTACAGAAGGAAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTTTGAGAGGCTGGTGCAGCGCTTCGGGGAGGCAGATTAAGAACTGTAAGCAGCATAATACCTCCTTTGTGGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGAATTCCTTCGCTGTCTGGGGACCTAAGTCATTCAGAAGAGGTGGAGAAAAGATATTTTCAGATTGGCAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTGGGAGTTTTGAAATGAGAAAACCTGTTGTTAATTTGCATTTTGGAATAACTCTCAATTGATCTCTTTTCTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCCCCGCCCCCCTCTTGTTTCTCTTTAGGACCTAGAAACAGAAGTGAAGTTTGAAGTCTGCTCTCTGCAAAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGTGGGAGTGGGTGGAGAAGAGGCTTGTTTTAAAAGCCAAAAACAGAAAGTAAAAAGAAATGGGAAAGTAAAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCAAAGCAGCAAGTGACTCTCTTCTGATGTGCACTTTTCATTTTTCTCCCCCACATTTCAGTGTTAGAAAGAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGAGAGGAGCTAGGGAAAGAAGGAGTTGGGGACAGAAGACTAAGATTTCAACGTGAAATTCCATTTACAAAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTTTACTGCAAACAATAGCTAATTTAGTCCTGTAAACATGCATTTATCATACATTTTAATTTTAATATTAAAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TACTGCATGTAAATGTTCTGAACTAAAGGTAGATAGCAATATGTAGTTTGCCATAAAATGAATGCATGTCTTAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTTTTCCATAGTTCTTCATTAATGAGACTTGTAGTCAAGAATAGATTGAAGATACCATTCTCCTTGTGTAGTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAAAAAAATCTCCTCTGGTAATACTGAAACAACTAATTTTTCTTATTTTGTTTGTTCCTCTTTATTATTAAATA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTATGTGAATTAACTCTTTAGTAGTTGGCCTGGTTGAAGCTCTGTGAGGAGCAAAGCAGCCCTCTCCAGGTGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGCTTGACTTTACCACCTGAAGGAGTATTTACTGCAAGAATTAACAAAGCAGGTGTTCCTGATCCAAGCAGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCCTGTTATTTGAAGAGCCTGAGAAATCTTATCCCGTTTACAAATGTCCTGGGAGTGCATCCAAAGTGAAACTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGCATCCTCAATACTAAGAAATCTCTGAGAATGACTGGATCTTGGCTCTTTGATCTTACCTCTACTCCTCTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAAACATGATTATCTAAAATTGTGTTAGGTGGATGAACCGCATCAAAGACTTCCAGAAGCCACTCCAGTGACCA 2146
Query 1 --------------------------------------------------------ATGCAGTGGCGCCATCTC 18
.||||.||||.|.||||.
Sbjct 2147 TAAGATAAATGTCAGAATCGCATAACCCCCAGGATCAGCCTGTTGCTCAGGCTGGAGTGCAATGGCACGATCTG 2220
Query 19 AGCTCACTGCAACCTCCAT--CTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTAC 90
||||||||||||||.|| | |||||.|||||||||.||||||.||||||.|||||||||||||||||||||||
Sbjct 2221 AGCTCACTGCAACCACC-TGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTAC 2293
Query 91 AGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTG 164
|||||..|||.||.||||.||.||||||||||||.||||||.|||||.|||||||..||.||||||||||||||
Sbjct 2294 AGGCGCCTGCAACCACACCCAGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTG 2367
Query 165 GTCTCGAACTCCTGACCTCAAG---------------------------------------------------- 186
|||||||||||.||||||||.|
Sbjct 2368 GTCTCGAACTCTTGACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCAC 2441
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2442 CGAGCCTGGCCTCTACTTTTTATTACTGTCATGTAGTTAGTGATAAAATGCTTCTATCTGAAAAAAAATTTGTT 2515
Query 187 ---------------------------------------------------------------------- 186
Sbjct 2516 GTTCTAAATTCTAAAAAATTCTCGTGATTATTGCTTAAATTTTAATAAAGCAGATGTGATTTTCAAATTA 2585
