Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15487
Subject:
NR_147501.1
Aligned Length:
4394
Identities:
159
Gaps:
4213

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCGCGCTATGGACCCCGCCTCGCGGAGACGCCTGGCTCGGGCCTTGTCCCCAGTGAGCGGCTGGAGCGGCCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGGTCGCAGAGCCTCCGGGACCCCGAGGAAGGGCGCCCCTCGGAGTTGCCCGAGGCCGGGCCCGGCGTCCACT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCCACTCGCCTCGCCCCTCCCCGGCCCCGCACCGCCCTCCACCCCGCCTCCTTCGGGTTCCTTCTGCGTCCGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGAGCCTGCGCGCCTCCCCCGGACGGCCACGGACTCGCAGCCTCGGCGAGGACGCTGCCTGCGTCCCGACTGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGGACCTCCCCGCGTGGCTCCCGGCGAAGCCCAGCAGCCGGAGGGTGCCAGGTCCGCCTGACGCGCCCCTCCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CACGGGAAGAACGGGGCGGGGGTCCAGGAGGGACGTAAGCCGGGCTCCCCCGGCGTGTTGATCCGAACCCGCGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGGAAAACTTGCGCAAACCAAAGGAGGGAAGAGTCAGGCAGCCCCCAGCCCCCCAGGGAGGCCCAGGTGAAAAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAGACGCCGGCCTCGCCTCTCCCGGTGCGGATGATCCCGGCACTCCCACCCCCGCCCCTGCTGCCCCGAGTTCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCTCCCTCAGCCCCACATCCTCTCTGGTCATCTAAGTGGACTGCAGCTGCTCAGGGAGCATGTCGCGAAGGATA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGGAAGGACAGGGGGTCTGCTTCCCCAGCCGCCCTCCAGACCCCCAGGGCTGGTAGGGGCCGGCAACCCTATGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCCAACCTGGCCTGCTGCAGGTGAGGGGGGCACACCAGGGTAACACAGGAGCAGGAGGGGGAGAAAGCCTGGCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGAGCATCCACCTCATAGGCACCTTCCTTGTGTCCAGGGTGCAGATGCCAGGGCTCTGAGGCCCTGAGGTCCTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCTGGGGCGAGGGGGCTTCCTCCATCCACTGCATCCACTGCCCGGCTGAGTCTAGAGGCCACTGAGCAAGCAGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCCTCCAAAGCCAGGCACACTCAGGCCCTCACATGGTCACGGTGCTTATGCTCTGGGCCAGCCTGGATTGCTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCCCTAGCTGAGATTGGGATTCACAGGGTCTTCCAGTTCCCCCTTTTCTTTCTCTACTGATTGAGAAACACAGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTCCTTTGATTGCTCTGGGACCTGGCCATTGCGTGTTCCCTGCAGCCTTGAACCCAGTTCAATGGGGCCGGGCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CATTCCCTGATAAAGCTGTTTAGGTTGCTTGAAAACACAATCAACCCTATTGCTAAACACGTAGAAACTGGCCC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGCCCTGAGTCCAATCCCTTAAACTCTCATCTAAGCTCCATAGCCAGAGTCCCTTGCTGCAAATGTACCTGGGT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGAGCATCCCTTGCCTCATCATCGATCCCAAGAAAGCTGAAGCTCCATGTGAAAATTTCCGGAAGAAATGCTCT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGACTGATCACCCTGGCGTTTAGAGCTTCTTTCCTTGGAATCCCAACCAATTCCATCGCGGGACTGTTTGGGGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGTCTTTTGAGGCAACTCCCTTGCTGCCACTTTTGGGGCAACTCTAGCCTCCTCATATTTGGCCAGATAGAACA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTTCCAAGCTGTAAATGTTTCCAGGAAAAAATCTCAACTACAAAGACACTTTCAAGGTGCTGCATTTCCAACAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CACTCTCCGTATCCGAGTGGACAGCCCAGAGCAATGGTGCTTCCAATCCACAGAGCCCCTCCACAGGTCCCTTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCATCTGCAGACACCCACATCTCAAGACGGGGTTTCTCCATGTTGAGGCTGGTCTCGAACTCCTGACCTCAGGT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACCGCGCCCGGCCTAGGATTTCCTC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTTTGACGATGAATAGTTCTCCACTGTAGTCTCACTCTTTCTCCCAGGCTGGAGTGAAGTGGCGTGCTCTCAGC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TCACTGCAACCTCCACTCGCCGCTCCACTCCCTGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GATTACAGTCCGGCTCTGTCATCCAGGCTGGAGTGCGATGGTGCCATCTCGGCTCACTGCAACCTCCGACGCCC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACTGCAGCCAGAGACCTCCACGGCCGGCAAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCCCCTGCGCAAGGCCTCACGGCTCCAGGCTGTTGGAGGTACCTGCCCACTCAACCTGGGCTGGCTGTTGGAGG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TACCTGCCCACTCAACCTGGCGGGCTGTGCGTGGCTTGTGCTTTGGGCTGGATCCCACGCTCGCCATGGGATCT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCACTCGGACTGCAGCTGGGCCGGGCATGCCATGACCTGCTTCCACCTTGGGTGCTGACGTCTGGATGAGAGGA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ACATGGTGGCGCCTGAAAAATCTGGAGACACCAGAAACCCTGGATCCCCAAAGGAAGTGTTATTCCCGCTGTCC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTGCTGTGGGTGTGAAGATGTGTGCTGCACATCCCAGTTTCCAGCACAGGACAAAGACTCAGAGAGGCACCTGC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CAGGAGTCTCAGGTGATGGAACCCAGTGGCGGGCATGTGGGCAGCTGCCCCAGGTGGAAGGGATCGTGGCACAG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CTCTTGGTTCCCCAGGCTGGCCCTGACCTTCGTGCTTTCCTGCCCATGGCCCAGACTTCCGAGCTCCATGTTGG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GGATGCTCAGGGACAACCCTTCAGCCTCCCCCACCATGTCCCGGCTACTGCCCAGGATTCTTGTTCTCTGGAGG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GTGGATCCAGCCCTCCCCATCTTGGTGCCCTACCAGGGCCAGGCTTCCCATGGCTCTTTCTGCAGCCCCTGGCA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CAGACTGTGGGGCGCACAGCCCGGGGAGCAGTGGGCCTTGGAGGGGCCAGGTCTGCATGTTCCCACCCCCATCA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TGGAGTTTGACACACCAGTGGGCAGGTAACTCAATCCCCCCTCACCTTCTCTTCATCTGTTAGGGGTGACAGGG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TGCTCCCCGTGGGGCCAAGAGGATGCAGCACCCCCACCGGCTACCCTTCCGGCCACACCCTTCTCTCCTGGCCC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ACCTTCTGAGCTGGCAGGGCTTCCTTCCTGGCTTCTGCTGGGCAGTGTATTAGGGTCCTCTAGAGAGACAAAAC  3108

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   .||
Sbjct 3109  CAATAATGGAGTTTAGGAGAGGGGATTTTTATTTGTTTGAGACAGAGTCTTGCCCTGTCACCCAGGCTGGAGTG  3182

Query    4  CAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAG  77
            |||||||.|.|||||.|||||||||||||||.|.||||||||||.|||.|||||||.|||.||.||||||.|||
Sbjct 3183  CAGTGGCTCGATCTCGGCTCACTGCAACCTCTACCTCCCAGGTTGAAGTGATTCTCCTGCTTCAGCCTCCCGAG  3256

Query   78  TAGCTGGGATTACAGGC-----GTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGAC-GGGGTTT  145
            |||||||||||||||||     |     |||.||||.||.|||.||||||||.||||||.|||||| |||||.|
Sbjct 3257  TAGCTGGGATTACAGGCACCCAG-----CACCACACCCAGCTACTTTTTGTACTTTTAGTAGAGACGGGGGTCT  3325

Query  146  CACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------  186
            ||||.||||||||||||||||||.|||||||||||||||.|                                 
Sbjct 3326  CACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCTACCTCTGCCTCCCAAAATGCTGA  3399

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3400  GATTACAGGGGAGAGCTACCGCGCCCGGCCAGGAGAGGGGATTTATTAGGCGAACTGGCCCACACACTTATGGA  3473

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3474  GGCTGAGAAGTCCTCCCATAGGCTGTCTGCAAGCTGGAGACCTAGAGAAGCTGTAAGTGAGGCTCAGTCCAGGT  3547

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3548  AAGAAGGTGGTTGAACCAAGGAAGCCAGTGGTGTAACTCTCATTCTGAGGCTGACTGGCCGAGAGCCCTGGGAG  3621

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3622  GCCTCTGTGGCAAGCCTGAGTCCAAAGGCCGAAGAACCTGGAGTCCTGATGTCCAAGGGCAGGAGATGGGTGTC  3695

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3696  TCCCTCCAGAAAAGAGAATTTGCTTGTCTTCTCCCTTTGTGTTCCATCTGGGTCCCCAACCAAGTGGATGTGCC  3769

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3770  TGCCCACGCTGAGGGCAGATCTTCACTGAGTCCACTGAAAACATCCTCACACACTCAGAAACAATGCTTCGCCA  3843

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3844  GCTGCCAAGTACAGTGTGTGTGCCTTAGTCCCAGCTACTCAGGAGGCTAAGGTGGGAGAAACGCTTGAGCCTGG  3917

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3918  GAGCTGGAGGCTGCAGTAAGCCATGATTGTGCCATTGCACTCCAGGCTGGCTGACAGAGAGATCCTGCCTCAAA  3991

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3992  AAAAGAGATAGATAGATAGATAGATAGATAGAGCTCCACCAGCCATCTAGGCTTTTTTTTTTTAAACAGGGTGT  4065

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4066  CACTCTGTCAACCAGGTTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTTGACTTCCCAGGCTCAACCC  4139

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4140  ATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGCGTACAGGCACAGACCACGATACCTGACTTATTTT  4213

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4214  TAAATTTTTTGTAGAGAAGTTTCACCATGTTGCCCAAGCTGGTCTCAAACTCCTGGGCTTAAGCAAACCTCCCA  4287

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4288  CCTCAGCCTCCCAAAGTGATGGGATTACAGGCAGGAGACATGGCAGCCAGCTAAGGCTCCCTGTACCCTGTTAG  4361

Query  187  ----------------------------  186
                                        
Sbjct 4362  TCGGCTTTACAGCACCTGGAATTGACCG  4389

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