Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_152566.1
- Aligned Length:
- 3093
- Identities:
- 163
- Gaps:
- 2908
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGAGCTTTGCTGAAACTGCACAAAAAATCGAGCCGGGGGGTTCCCTGGTCCCCGGCGATGGGGCGGGGAGCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGCCGGGGGAGGGGGCGGGCGCGGCGGCGCGGGCCCCGCCGAGGGGGGACACCTGGCTGAGGCACAGCTGCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTGCCTTTCCGCGCGAGCCCAGAGCTCCGATCCCTGCGCGGGCTCGAGAGCTCGCCCCGAACGGGGGTCTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCCTCCGCCGTTGACAGGTTTTGACCTGTAGCAGAGAACCAATTCTGGAGAACAGCCTCACTTCTTTGATTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATACTTACATAATGCATTGGAACATGACATGAGATTAAGCTGGGAGCAGAGGCTGGGAGATCGATGCTGCTTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCTGTTGTGCAGAATAACATCAATATGCAATAATGGTGGCCAAAGGAGCCTGCACCCATCCGTTTTTACAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCAGTGTATAAAGCCAAATGTCCCATTTAAAGTTTGACATTTGCAATAGCATTCTATTTAAAAGGTTTAATAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGATAGAATGAAGACCACAATAAAAGAGACCTCTACTTAGCTCAGCAATTCTTACCTTTCTTACCTATTTGATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGATGTCTTTTGAAAGGTGTACTGCAAGGAACAAAATGTTTGTAAATTCTCCTTTTACCAAGGTTTCTTTTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATTGATGCCAAAGAGTTCCAATATTGAACATCTTAAGTCTGTTACTTGGATTACGGATTGAGTTTGGAGCTTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCAGAGGACTACAGGAGAGTATCCAGGAAGTGGATAATTACTGTACCTTCCTCATGGAAAAAGTTTTATTTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTGTTATTTCTCATTGAATACTATCAAAAAGGAAAAAAAAATGACCTAAACTTTTGAGATAGATTTGGCTCTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAAGTATTTAGGCCTACTCTAGGTGCGGTACTTCACTATAGTTTATAAAAGATGGTCCCTGTCAGCAAAGAAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTAACCTGTATGAGAATATTATACTAACATACAAGAAACAAGTAGAGAATAATGGAATGTAAACTCTGGCTTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTAACTTAAGTGTGGTAGAAGCTTGAAGGAAATGTGGACTTAAACTTATCAGAGAAGACTTATAAGAGGATATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAGGTGTAAATTTTGATACCACCATTGCCGCCTTCCCCTCAAAAAAGGTGAGAACTGACTAAACTACTGGTAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTAGACCATGTGGAGAAGGAACTGAAAATGGAAACAGAAACACGTCTGTACAGAGCAGAGTGTCAGATAATAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCATTTTAGTAGAGGGCAATAAATGCCACATGAGATGATCACCTCAGCAGAAAACTGGGATGTGGAGACGCTGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAGCGGGGCCAGGAAGGCTCCGGACGGAGCAGGTTTTCTGGACCACAGACACACTGCCCCGGCGCCCTCCGCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCGCTCCTCCCCAGGCCCATGACAGTGCCCCGCTGGTTTCTGCCGCGCTGCCGGACTGGAGCTCAGACGGCCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCGCCAGCCCCCCCAACCCACGCAGATCCCTGCTGACCTGGGCAACTCCCCACCCTCGCTGAAGGTTCGAGGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACCCCGCTTTCCCGAGAGGAGCCGGGCGGCGGGTACTTATCTCCGACCTCCGGCTAGTGGGAAAGGCCGCGCG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACCGCCCGTCCTCCAACTACAGGGACCGCACGAACAGCGACTGGGAAACTGCCACTAGAAAAAGATGACTGTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AACTAAAACCTGCATACACAGCTACATCCTTCCCTGGAAGAGCACAGTGGAACTAGATCCTAGTACAGATAGCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAGGGATTGTCAACATTCTTGTCACACTGAAATTTCCTTCTACTGATCTCCAAACTTCTAAAAATTTGCTGTTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGACCAGCTGAAATGTTTGAAAGAAGCAACTAAAGAAAGAAACTTTGAAAGAAGCTTCCAAAAGAAGCAACCAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTCTACAAAGGCACAGTTTGACTCAAATGGATCCAACTGATTAGCAAATGGAAAATAACATGGAGGAATATATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTGCATGACAAGCATAGCAGCTCCAAGTCATCCCTAATGAAGCCAAAAATTTAAGTGCAACCCAGAGAATGGAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGTTCAGAATCTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCTAGGCTGGAGTGCGGTGGCATGATCTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTTCCGGGTAGCTGGGACTACAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTGCCTGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCTAGGATGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCTCAATCTCCTGACCTCGTGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGGAATTACAGGCGTGAGCCACCGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCCCGGCCCAGAATCTTTTTTAAATTTTTTATTATTATTATTTTTTCTGAGATGGAGTCCGGCTCTGTGGCCAG 2442
Query 1 ------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGG 68
.|||||||||.|.|||||||||||||||||||||...|||||||||.||||.|||||||.||||||.|
Sbjct 2443 GCTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGACTCCCAGGTACAAGTGATTCTCCTGCCTCAG 2516
Query 69 CCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGG 142
|||||||||||||||||||.||||||..|||||||.||.|.||.|||||||||||||||||||.||||||||||
Sbjct 2517 CCTCCTGAGTAGCTGGGATAACAGGCACGTGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGG 2590
Query 143 TTTCACCCTGTTGGCCAGGCTGGTCTCGAACT-CCTGACCT--------CAAG--------------------- 186
|||||||.|||||||||||.|||||||||.|| ||| |||| |||.
Sbjct 2591 TTTCACCATGTTGGCCAGGATGGTCTCGATCTGCCT-ACCTTGGCCTCCCAATGTACTGGGATTACAGGCGTGA 2663
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2664 GCCACCGTACCCGGCCCAGAATCTTTGCCTTTTGTTTGCATAGTTTAATCTTCTAAACCAGTTGCTTTCCCAGA 2737
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2738 AAAGGTGACTTAAAGTCATAGCCTTTGTGTTCATCACCATACTCTCCATAGTTTTACAAATTATTCAGTTTATT 2811
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2812 TTTAAAAGGGGTAATTTTTAAAATTTTTATTTTTAATTCCGAAGCATTCCTTTTAATACATTCTCTTGAGGGAA 2885
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2886 AAAAAAAATCACACATAGTGATTGTGTGTGGTAGTGATTATGTGTGGCCTAAGTGGCAATTGATCAATACCCCA 2959
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2960 ATCTCAAGCCTGTACATTGTTACTGGTTGACTGGTTGGTTGCCTGGTGGGCTTTTTGTCCTTCCAGATGTTTTT 3033
Query 187 ----------------------------------------------------------- 186
Sbjct 3034 CTACCTTCTGCCTTTTCCAATAAAGCTTCCATTATAGGAAAAAAAAAAAAAAAAAAAAA 3092
