Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_156186.2
- Aligned Length:
- 6066
- Identities:
- 160
- Gaps:
- 5880
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGACCCTAGTCGGCCGCTGAGAGGCGCGCGGAGTCTGGGCCGCTGCCGTCTAGGGGTCCCGTCCCGAGGCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGGCATCTCCGGCCCGAATCCCGGAGTGCCGGGTCGCGCCTGCACCGAAGGTCCCGGCTCCTGTGCCCTCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCAGCCGTCAGGGCCCGTCCCCCAACTCCCCTTTCCGCTCAGGCAGGGTCCTCGCGGCCCATGCTGGCCGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACCCGCGCAGCCCAGACCGTTCCCGGGCCGGGCAGCCGGCCACCATGGTGGCCCTGAGGCCTGTGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCAGGGGGGCTAAAGGGCTCAGAGTGCAGGCCGTGGGGCGCGAGGGTCCCGGGCCTGAGCCCCGCGCCATGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGGGGCCATCGCTTCCCGCATGAGCTTCAGCTCTCTCAAGAGGAAGCAACCCAAGACGTTCACCGTGAGGATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTCACCATGGACGCCGAGATGGAGTTCAATTGCGAGTCTTGCTCTGTCACCCTAGCTGGAGTGCAGTGGCGTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTTGGTTTACTGCAACCTCTGCCTCCCAAGTTCAAGCGATTCTCCTGCCTCAGCTTCCCAAGTAGCTGGGACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAGATGAAGTGGAAAGGGAAGGACCTCTTTGATTTGGTGTGCCGGACTCTGGGGCTCCGAGAAACCTGGTTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGGACTGCAGTACACAATCAAGGACACAGTGGCCTGGCTCAAAATGGACAAGAAGGTACTGGATCATGATGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCAAAGGAAGAACCAGTCACCTTTCACTTCTTGGCCAAATTTTATCCTGAGAATGCTGAAGAGGAGCTGGTTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAGATCACACAACATTTATTCTTCTTACAGGTAAAGAAGCAGATTTTAGATGAAAAGATCTACTGCCCTCCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAGGCCAAGTATGGTGACTACGACCCCAGTGTTCACAAGCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGATTTTTGGCCCAAGAGGAATTGCTTCCAAAAAGGGTAATAAATCTGTATCAGATGACTCCGGAAATGTGGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGAGAGAATTACTGCTTGGTACGCAGAGCACCGAGGCCGAGCCAGGGATGAAGCTGAAATGGAATATCTGAAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TAGCTCAGGACCTGGAGATGTACGGTGTGAACTACTTTGCAATCCGGAATAAAAAGGGCACAGAGCTGCTGCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGTGGATGCCCTGGGGCTTCACATTTATGACCCTGAGAACAGACTGACCCCCAAGATCTCCTTCCCGTGGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGAAATCCGAAACATCTCGTACAGTGACAAGGAGTTTACTATTAAACCACTGGATAAGAAAATTGATGTCTTCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTTTAACTCCTCAAAGCTTCGTGTTAATAAGCTGATTCTCCAGCTATGTATCGGGAACCATGATCTATTTATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGAGAAGGAAAGCCGATTCTTTGGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAGGAGAAGGCTAGAAAGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GATGGAGCGGCAGCGCCTCGCTCGAGAGAAGCAGATGAGGGAGGAGGCTGAACGCACGAGGGATGAGTTGGAGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAGGCTGCTGCAGATGAAAGAAGAAGCAACAATGGCCAACGAAGCACTGATGCGGTCTGAGGAGACAGCTGAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGTTGGCTGAAAAGGCCCAGATCACCGAGGAGGAGGCAAAACTTCTGGCCCAGAAGGCCGCAGAGGCTGAGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGAAATGCAGCGCATCAAGGCCACAGCGATTCGCACGGAGGAGGAGAAGCGCCTGATGGAGCAGAAGGTGCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGCCGAGGTGCTGGCACTGAAGATGGCTGAGGAGTCAGAGAGGAGGGCCAAAGAGGCAGATCAGCTGAAGCAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GACCTGCAGGAAGCACGCGAGGCGGAGCGAAGAGCCAAGCAGAAGCTCCTGGAGATTGCCACCAAGCCCACGTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCCGCCCATGAACCCAATTCCAGCACCGTTGCCTCCTGACATACCAAGCTTCAACCTCATTGGTGACAGCCTGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTTTCGACTTCAAAGATACTGACATGAAGCGGCTTTCCATGGAGATAGAGAAAGAAAAAGTGGAATACATGGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAGAGCAAGCATCTGCAGGAGCAGCTCAATGAACTCAAGACAGAAATCGAGGCCTTGAAACTGAAAGAGAGGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GACAGCTCTGGATATTCTGCACAATGAGAACTCCGACAGGGGTGGCAGCAGCAAGCACAATACCATTAAAAAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCACCTTGCAGAGCGCCAAGTCCCGAGTGGCCTTCTTTGAAGAGCTCTAGCAGGTGACCCAGCCACCCCAGGAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTGCCACTTCTCCTGCTACCGGGACCGCGGGATGGACCAGATATCAAGAGAGCCATCCATAGGGAGCTGGCTGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGGTTTCCGTGGGAGCTCCAGAACTTTCCCCAGCTGAGTGAAGAGCCCAGCCCCTCTTATGTGCAATTGCCTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AACTACGACCCTGTAGAGATTTCTCTCATGGCGTTCTAGTTCTCTGACCTGAGTCTTTGTTTTAAGAAGTATTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTCTTCCTTTGTCTAATGTGGGATTCCTGACTCCCTTCGTCCAAGGCACCGGTGTGTGTGTGTCTTGCACTCCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGCTGACCTCCACCGCCCAGCCTGGGAAGTCATTGTAGGGAGTGAGACACTGAAGCCCTGAGAAGCCAGTGCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATCATCCCCACCCCGCCCAGGGTTCCGGAACATTCATTCCCCCACCGGTGAGGACCTGGCATGCAGCGAAGCAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCCAGCCCGGCGGATCCCAGGCCAGCACGCCTGCCGGCTTCTCATCGTCAGGGAGCCCGCCCAGAGCTCGTGAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAGCAAGTGCTGGGTCCCCGCCAGGCACCCCGAGGCGGCGCTCTGGCTGGCAGCTGGTGGGGAATAGGCAGGGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGCTGTGGCTGGGGAGAGACTTTAGGCAGAAGCTGTGATGCAGGCTGACTGCCAGCCGAGGGGCTGGGTAGTGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CGTGCGGGAGCTGATGGTACAGGGCACTCGCTGTCCCCCTCCGGCCACCCTAGACCAGGGTCCGAGAGGCAGGC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGGAGCCACTCATGTCTTCCCCATTGCCCGACGCCCATAGACGCTCCTTCCTGTGTGGGGCTGGGGTACTCCCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGTCGTACTGCAGTCAGCACCCGTAACCCGGCTATGACCAGGGATCTGTAAGCCCTGTGGCTCCACAGGTGCTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTTCTCACTGGCCCAGACTCTGAGCTCCACCGGCCCAGTCTGCACGGCCCATCTGCTTCACCTTCCCTCCCAGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CACGTGCCAGTGGCCACAGCCCACTTCCCAACCCACTGTTGTACCCAGGCCTCACTTTGCTGTTGCCCTTGTCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTCTTCGGGCCCTGAATTTTCTGTTCCCTGGGGGCCAGCCAGGGCCCTTTGTGCCCCTCCCAGCACAGGCCTGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGCAGGTGTCCACTCACAGGTGGCGCTCACCTAGGCTGTCACAGGACCCACCTCCATGCCAGGCAACAGAGGGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CACAGAACCACCCCCACGGCTCACTCCTTGGTCTGGGGCCACCTTCTTGCCCTTTCTTTTTTTTTTTTTTTTTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTTTTCCGAGATGGAGTCTCTCTCTGTCACCCAGGTGGGAGTGTGGTGGCACAATCTCGGCTCACTGCAACCTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CACCTCCTGAGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGCACCACCACAC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TTGGCCAATGTTCTGTATTTTTAATAGGGACGGGGTTTTGCCATGTTAGCTAGGCTGGTCTCAAACTCACACCT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GGGATTACAGGCATGAGCCACTGCACCCAGCCCCTTCTTGCCCTTTCTTTTCTCCATGGCTGATGCTGCTGTGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CCAGCCAGGGCCCTTGAGATCCTTCCAGTTTGGCTGTTATGCAAAGCAGGTGATTTGTCTTAATCAGATAAAAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ATAGAGGCTATGGGGGCCTCAAGATTTTTGGAGAGCAGAGGTGGTCTCTGGCAATTCCATCTGGTTTTGAGAAA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CTTAGCAGCTCACAGAGCACAGAGATCCTGCCTTCTTCCTACTATCAGGCTGACCTAATGGGGTTGGGCTGCTC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGCAACTGCTTGGGTCACCTTGCCCCAAGGAAACCAGCCCTGGGTGCCACCCAGCCACTTAGGGTCTACAGGGT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GGGACTCCAGACCTAGAGCGTAAGTATGGATGTTGTGGCCCTGTGTCTTCCTAGTGTGACCCAGCCAGGAGCGG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AAGCTTCAGGCGTTTGTAAAGTGAGGTCTGGCTCTGCCTCCTCCGTTTTTTTTTTTTTTCTGTTTCTGTTTCTG 4292
Query 1 -------------------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAAC 31
.|||||||.|.|.||||||||||||||||||
Sbjct 4293 TTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGTCACGATCTCAGCTCACTGCAAC 4366
Query 32 CTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTA 105
||||..|||||||||.||||.|||||||.||||||.||||||.||||||||||||.||||||||||||||||.|
Sbjct 4367 CTCCGCCTCCCAGGTACAAGAGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGTGTGCCACCA 4440
Query 106 CACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGA 179
..|....|||||||||||||||||||.|||||.||||||||.||.||||.|||||.||||||||||||||||||
Sbjct 4441 TGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTAGCCAGACTGGTCTCGAACTCCTGA 4514
Query 180 CCTCAAG------------------------------------------------------------------- 186
|||||.|
Sbjct 4515 CCTCAGGTGATCCTCCCACCCCGGCTTCCCAAAGTTCTGGGATTATAGGCGTGAGCCACCATGCCCGGTCTCTT 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 CTCAGTCTTGAAGCCCATCCCTGGATTTCCACCAGGAGTTACTTTCCTCCTGACCTGTAAATTTGTTCTTTAAC 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 AATGGCTGCAGGTGGGAGCATATGGTGGTTTATAAAAACGCTGTCGGGCTTTGTTTCCTTCTTTAGCTGCCGTG 4736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4737 TCTACTTCTGAAGTCTGGGAAGTGCCAAGCCACGCGGCCTCAAGGGAGCTGGCTGGTGTTTGAGCTGTGGCAGA 4810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4811 AGCACCTGGGGCTCCAGGGAGCAGGCTGGGAACTGCAGGACCTTGCTCAGCCAGGAGCACTTCCCCCTCCTTGA 4884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4885 GGCAGGAATACTGAGGTGCCTCCCCACAGATGGAGAAGGTGGAGAGGAGGATGGGCCTCAGGAGCATCTCAAGC 4958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4959 CCCAGTAGCAGGAGAAAGAAAGAAAGAGATGCCTGGTTTTCACAGACTGGTTCCTGTGGCTGGGATGACTGCAT 5032
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5033 CCTTTTTTTTTTTTTTTTGAGACGGAGTTTTTGCCTTTGTCGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGC 5106
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5107 TCACCGCAACCTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCA 5180
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5181 CGCACCTCCACGTCCGGCTAATTTTGTATTTTTAGTGGAGACGGGGTTTCTCCATGTCGGTCAGGCTGGTCTCG 5254
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5255 AACTCCCGACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCT 5328
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5329 TGGCCAGACTGCGTCCTTTTTAAGCGAACATTTTAGGGCCTGGGAGTTTGTCAAGTAAGGAAGTCTCAAGCCCA 5402
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5403 AAGAGCAGCGTCCTGACCATGGTGGTTTCATTACGAGCCCTTCTGCTGGCTCTCAGGCAGAAGCCCCACAGCAC 5476
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5477 CGGGACCATTCATGAGGTCACTGCCCAGCTCATGATGTCCGTGAGGCTGTCCTTTTGGCCAGTAGCCGTGTGCA 5550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5551 GCTGTGTGGCACAGATGGCTTCGTTCATCCTGATCAAGGCCCCACCTCAGCCACAGCAGTCCCCCCAACCTGTG 5624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5625 TTGTCCACCCTATTATTCATGTACCTGCCAGGCCCTGCTAGATAGCACCCCGTGGCATTACATAACACTTCATG 5698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5699 AGTGGCTGTGTCTTGTAATTTTGGGGACAGGTTTCTCTCTTTCCCTCTCTTTTTTTTGTCAAAAGCCCAGAGAC 5772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5773 TGACAACCAGCTGCAGTGTCTAAGTGTTCCTCACTGACAGGGTGGGGCCTCACCACCCCTGGAGGGAGCAGCGT 5846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5847 TGGCAGGGAGACAGCCTGGCCCAGTGACCCTGGGCCCAAGCCAGCCCCTCCAGGGCTTTCAGGGAAGCGCCATC 5920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5921 CATTTTCAAAGATGTCAAACGTCACTTCTTCCTGTAGGGCCCGAGTCCTGCCTCCTATCAGGGCCAGATCATAG 5994
Query 187 ------------------------------------------------------------------------ 186
Sbjct 5995 AAGGCTATTTTCTATTCTGGGGAACGATTATAACTTAAATGATTGTTTTAATAAAAATTCTAAGCTGGAAAA 6066
