Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_160527.1
- Aligned Length:
- 2476
- Identities:
- 160
- Gaps:
- 2290
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGTCTCTGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAACCCCAAGCTGGAGTGAATCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTAATAGTGACTGATGGTAAAGGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTTTCCTCAAACTTTAAATTGCTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAGGTTTGCCAGCATTGGAAAAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTTCCTGAGACCAGAAATACATATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATATAGATGGTGTTACTGAGAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAATTTTGTTGGGGGGAATGTCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGAGTCATTACTCAGCATCATGGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAAAGGCTTTTGTTTATAGTGGAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAGGAATGTGGGAAAGTTTTCAGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAATGTAATAACTGAGGAGGCCTTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTTCACCCAGAAGCCAGGACTGACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTTCAGCATTGGAGAATTCACAGTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAACTTGGGAAAAATCAGTGAGTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAGACAGAGATCAGACCTCAACAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTTGTATGGGGAATGGGTAGTCTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAAAGGAAATGTTAGAAGTTATTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGTTGCATCTCTGGATTTGTGATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGCCTGCTCTAGTCTCATCTCATAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTTGTAAATATATATATATTATTTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACATATATCATGTTTCAGTAAATGCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACTACCTTTATATTCTCCAACACAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTATTTTCTTTATTTTTTTGAGATG 1702
Query 1 ----------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGT 46
.||||.||||.|.|||||.||||||||||||||||..|||||||||
Sbjct 1703 GAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAGGT 1776
Query 47 TCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTT 120
|||||.|||||||.||.|||.|.||||.||||||||||||||||||||...||||||.|..|.||.||||||||
Sbjct 1777 TCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTTGCCACCATTCCCAGCTAATTTT 1850
Query 121 TGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------- 186
|||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||...|
Sbjct 1851 TGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCC 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 ACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGCCCGGCTGTTTTTTTAAGATAGAAAAAT 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 ATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCTTATAGATAACACATAATAAACATTGTG 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 AAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACA 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 AGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCTTATATATTTTATAGTAGGGCACTAAAT 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 ACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTCTAGGTGTCCCTCTGCTGTACATCCCTA 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 AATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCA 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 GTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATAAAATGATTTCTTAATATTGAACCAACC 2442
Query 187 ---------------------------------- 186
Sbjct 2443 TTGCATTCCTAGAATAAACCTCACTTAGCCATGA 2476
