Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_001737540.2
- Aligned Length:
- 3193
- Identities:
- 160
- Gaps:
- 3007
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTGGCCAGGCTGCTCTGGAACTCCTGGCCTCAAGTGATCTGCCACCTCAGCCGCCCAAATGGCTGGGATTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGTGTGAGCCACCATGCCAGGCCAGCATTTGGGAAAATTTTATTTCCTGCTTTATGTTTTAGCGTTCTTTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTGACCAGGAGTATTCTAGGTAAGGGTATTGAAATTGCCATTTACTGTGGCAAGCAAAGTGTGTTATGTACAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATTTGCCTAATTACCTATGTCGTTGAGTCATTGAGAAAATTAAATGAAATGATCAGAACTCATCTTAATGACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGGAGACTCTCCAAACATAATGCAAAGAAGATATAATCCACTGATAAATAATTTTAAGTTGACTTTATTTTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTTAACAGGAAGTATTTGTGTTTTTTCAATTGGCATTGTTAAATAATACCACATAAGTGTTTCTTTTACCATTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATATTTGAGGGGGGTAATAGAACATATACAGAAATATGGGTGGGTGGATTTGCATATATGTGATATTTACAGA 518
Query 1 ---------------------------------------------------------------ATGCAGTGGCG 11
..|||||||.|
Sbjct 519 AGGAAAGAAATGGATTTTTTTTGTGTGTGTGTGTGAGATGTTCTCTCTGTCACTCAGGCTGGAGCGCAGTGGTG 592
Query 12 CCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGG 85
|.|||||.|.||||||||.||||...||||||||||||||.|||||||.||||||.|||||||.||||||||||
Sbjct 593 CGATCTCGGTTCACTGCAGCCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGG 666
Query 86 ATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCA 159
||||.||||.||||||||.||.|.|..|||||||||||||||||||.||||||.||||||||||.|||||.|||
Sbjct 667 ATTATAGGCATGTGCCACCACGCACGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGACCA 740
Query 160 GGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------------------- 186
|||||||||.|||||||||||||||||
Sbjct 741 GGCTGGTCTGGAACTCCTGACCTCAAGTGATCTGCCTACCTTGGCCTCCCAAATTGCTGGGATTATAGGCGTGA 814
Query 187 -------------------------------------------------------------------------- 186
Sbjct 815 GCCACCGTACCTAGCCTGTTTTTGTTTTTCAGGCAAGGTCTCACTTTTTTGTCCAGGCTGGAGTTCAGTGGCGA 888
Query 187 -------------------------------------------------------------------------- 186
Sbjct 889 GATCTTGGCTTACTGCAACCTCTGCCTCCCGGGCTTGAGTGATCCTCCCACCTTGGCTTCCCAAGTAGCTGGGA 962
Query 187 -------------------------------------------------------------------------- 186
Sbjct 963 CTACAGGTCACCATGCCTGGCTGATTTTTGTATTTTTTTTAAAGATTGAGTTCCACCATGTTGCCCAGGCTGGT 1036
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1037 CTTGAACTCCTGGGCTGAAATGATCCTCCTGCCTCAGCCTCCCAAAGTGCTGGACTTACAGGCGTGAGCTACCA 1110
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1111 CGCCCAGCCAATTATTTTCTTTTTTGGGGGGTGGGGGATGGAGTCTTGCTCTGTCACTTAGGCTGGAGTACGGT 1184
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1185 GGCGCGTTCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGC 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 TGGGACTACAGATCAAACAGATGATGGAGGCAGCAACACGACAAATCGAGGAGAGGAAAAAACAGCTGAGCTTC 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 ATTAGCCCCCCTACACCTCAGCCAAAGACTCCTTCTTCCTCCCAACCAGAACGACTTCCTATTGGCAACACTAT 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 TCAGCCCTCCCAGGCTGCCACTTTCATGAATGATGCCATTGAGAAGGCAAGGAAAGCAGCTGAACTGCAAGCTC 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 GAATCCAAGCCCAGCTGGCACTGAAGCCAGGACTCATCGGCAATGCCAACATGGTGGGCCTGGCTAATCTCCAT 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 GCCATGGGCATTGCTCCCCCGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCACTGATCCTGGATGAGCA 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 AGGGCGCACTGTAGATGCAACAGGCAAGGAGATTGAGCTGACACACCGCATGCCTACTCTGAAAGCCAATATTC 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 GTGCTGTGAAGAGGGAACAATTCAAGCAACAACTAAAGGAAAAGCCATCAGAAGACATGGAATCCAATACCTTT 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 TTTGACCCCCGAGTCTCCATTGCCCCTTCCCAGCGCCAGAGACGCACTTTTAAATTCCATGACAAGGGCAAATT 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 TGAGAAGATTGCTCAGCGATTACGGACAAAGGCTCAACTGGAGAAGCTACAGGCAGAGATTTCACAAGCAGCTC 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 GAAAAACAGGCATCCATACTTCGACTAGGCTTGCCCTCATTGCTCCTAAGAAGGAGCTAAAGGAAGGAGATATT 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 CCTGAAATTGAGTGGTGGGACTCTTACATAATCCCCAATGGCTTTGATCTTACAGAGGAAAATCCCAAGAGAGA 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 AGATTATTTTGGAATCACAAATCTTGTTGAACATCCAGCCCAGCTCAATCCTCCAGTTGACAATGACACACCAG 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 TTACTCTGGGAGTATATCTTACCAAGAAGGAACAGAAAAAACTTCGGAGACAAACAAGGAGGGAAGCACAGAAG 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 GAACTACAAGAAAAAGTCAGGCTGGGCCTGATGCCTCCTCCAGAACCCAAAGTGAGAATTTCTAATTTGATGCG 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 AGTATTAGGAACAGAAGCTGTTCAAGACCCCACGAAGGTAGAAGCCCACGTCAGAGCTCAGATGGCAAAAAGAC 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 AGAACCCTGCCTCTGATCTTCAATGCCTTTCTCACTTGTGGATGTCCTTCCTGTCACGACAGAGCGCATGAAGA 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 GGCCAACGCTGCCCGAAAACTCACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTT 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 CACAGGGGGTACACATATCTGTATATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAAGCC 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 AATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCACAAGGATGTCAACGTGGTAGTAGTGGAAGGGGG 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 CCCCAAGGCCCAGAAGAAATTTAAGCGTCTTATGCTGCATCGGATAAAGTGGGATGAACAGACATCTAACACAA 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 AGGGAGATGATGATGAGGAGTCTGATGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGT 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 ACAGCCAAAGACCGGAGCTTTGGAGAGATGAAGTTTAAACAGTGTCCTACAGAGAACATGGCTCGTGAGCATTT 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 CAAAAAGCATGGGGCTGAACACTACTGGGACCTTGCGCTGAGTGAATCTGTGTTAGAGTCCACTGATTGAGACT 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 ACTGCAAGCCCTTGCCTCTCCTCCCTTGCCTTTGTCTCTTCAGTCCTCTCACTTATTCTATTTCCCAACCCCCT 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 CCCACTTGTTTGTGTGATCTCAGAACTGTGCCAAGCAGACACTGGGACAAAGGGAGAATATCTTGCTCCCCTCC 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 TGAGTCAGCCTGGTGTTGCCCTTTATTCCCCTTATGTGCATATGATTAAAGAGTTATTTTTAAACTTGGTGTGA 3182
Query 187 ----------- 186
Sbjct 3183 TATTTTTCACA 3193
