Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_001737843.2
- Aligned Length:
- 4564
- Identities:
- 161
- Gaps:
- 4378
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCTCGAACTCCTGACCCCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCCAGCCCTAGCCTGCTTTCTTAAATCAAGGAACGGGGCTCTAACAAGCCCAACAGGTCTCAACTCCAAGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTTCCCGGCTGCTCACTGGCCCCTGCCGAGAGGGGTCCTTTGGGTACAGAAGCACTGACCTCCCTGTGTTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGGGTTCCTGTCCGAGCCTGTGCTCTGCACACGTGCCCCTTCCCACGTGTCCCTTCCATGGATTAATTTAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTTAATTCATGAAGAGGTGCCCAGAGCTTGGCCCGGCCCCCGGTGAGAGGCATTATTTTTATTCTTCCCCCTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGAACAGGGGTCTTGTCCGTCTTCTCCTTGGTGGTGTATTGGATGAAGTAGGTGCTCAGCAAATGTAGGAGGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGCAGACTCCACATCTGCAAAGTCCATGCACCCACTGCGGCCAGCACGCCATCACTGCCTCCGGACAGTGCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGCCCTCCCTGTCTTTCCTTCCTGAGCTTTGGAACTAAGCAGTGAGAGTGGTTCATGGTCGCAATCCCTTCAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCTGCGAAGAGCTTATCTGAGGATATCTTGGTGCTGATCACCTCTGAGAAGCAGCGTTGATCTTGACTCACTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATCCGATTCATTCAGGATAAGCCACACCCTATTGCCATTTTCTTCACGCTCCTCTATTATCTGGGGCATAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTAACATTCAATTTTCTTCTTTTTCTTTTAAGAGACAAGGTCTTGCTCTGTGGCCCAGGCTGGAGTGCAGTGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACGATCTCAGCTCACTGTAGCCTCCACCTCCCGGGTTCAAGGGATCCTTGCACCTCAGCTTCTGGAGGAGCTGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACCACAGAGGCATGTCACTGCACCCAGATAATTTTCTATTTTTTGTAGAGATGGGGTCTCACTATGTTTCCCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCTGGTCTCAAACTCCTGGCCTCAAGGGATCCTCCCCCGTGGCCTCCCAAAGTGCTGAGATTGCAGGCATGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTCCGTGCCCAGCCAATGTTGAACTTTTGCTGGAAAGTCGTGCTGTTGTGTGTATGTCAGTTGAAGCTGGGCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCATCTTAGCCAAATATCTGGTGGTTTGGTGGCATCAAATTGTCTCCTCTTCCTTCAGTCCTAGAGGCAAATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATGTCCCATCCATCATTCACAGGTTTCTGCAAGGTTTGAAGTCTGCACACTTCATTTCCATTCTTTATTGTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTAACTGGTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTTTTGTTTTTGAGATGGAGTTTCGCTCT 1332
Query 1 ----------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCT 58
..||||||||.|.|||||||||||.|||||||||||.||||..|||||||||.|||||
Sbjct 1333 TGTTGCCTAGGCCGGAGGGCAGTGGCACTATCTCAGCTCATTGCAACCTCCACCTCCTGGGTTCAAGCAATTCT 1406
Query 59 CGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGG 132
|.||||||.||||||..|||.||||||||||||||||..|||.||.|..|.||.|||||||||||||||||||.
Sbjct 1407 CCTGCCTCAGCCTCCCAAGTGGCTGGGATTACAGGCGCCTGCGACCATGCCCAGCTAATTTTTGTATTTTTAGT 1480
Query 133 AGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------- 186
||||||.||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCGGCCCACATCGGCCT 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 CCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCCGGCCTCCTAACTGATGTTTCAGTTTGGATCTGAAG 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 AACGGGAATTTTCATAATTTCTTTTTCAAGGTTTTTGAGAATTAGTTTGTTGCCATTTCCGAACTTCCATCCCA 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 TTGTGATGTGCATAACCAGTCGGCTTCCTTAGCCTCATCCTCCACCCAGGGAAGCTCCGACCACGCCAGCACCA 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 GGAAGGCCAGCCGGGGAGCAGCCTGGCCCAGGGGTCAGGAGCCGGGGCCTGTGTGACTGGGGCCTGTGTGGCTG 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 GCACCTGGTGGATGTGAGCCCCAGGACAGGGAGTTTCTGTGCCCATGAGATGGAAGCAGCTCACTTCTTGGCCC 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CTTTCAAGAATCTGGGAAGAGCTCCAGGAGTCAGAGGTCTGGGTGCCAGTCCCAGCTCTGCTCCAAACTGGCCG 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 TGTGACCTCAGCGAAGTTATTTCCCAGTTTTGTTTTCTTCTTTTACAAAATGACAGGGTGAGAGTCGTGATTGG 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 TTTTCTTAGTGTCAGAAGTGCTGAACTCTGTTAGAAAGCGTCTCAGGTTGTTTTGTTTGACAGTGACTACCCAC 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 TTTGCAGAGACCTGGGCTGCCCGCTCTCTGGGGAATACTGGAGGTTATGCCCCATCTCCTGTCCTGTGGGAGAA 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 CCCACCCTCCGAACGAGGCTCTGGTGAGGTTTTCACAATCAGTAACAAGGCCGATCTCCATCAATGGAAGTCTC 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 CCCGTTTGAGATGGGGTGTGTGCTCCTTACCCAGGCTCCTGAACAAAACCCACCTCCTTGTCTTGGCACCACTG 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 AGAGTGCACACCGAGGGGGCTCCAGCACCAGATTGTGGGAACAGTCACGAGAAAGCAGCTCAGACTTCACACCC 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 AGAGCCCTTGATCCCTACACACCCAGTATTCCTTCACAGCGCTCTTCCTGCTTCCTGGACACGTGGAACTGCTT 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 CTCCATCGGGGAGGATCCATCCAGAGCCCTTTGGGTGGGTGCTCAGGGCAATAGCTGCTGCCTCTTCCTTCTGC 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 TCAGTGCTGGGAGGCGTTACACTTTCCCCATATGGCACGGAGCAGAACGTGCACCTTTGGCTCTGGAAGGAATG 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 AACATCCTACCCGTTAGTTAGCCCTGGGAGTCACTGACTCGGTTCTTCCCTGGACACCAATGTCCTATGGAGCA 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 CACAGAAAGCCACGGAAGTGTGGTCTGCGGGTTGAGACGGACTCCGTTCATGTGGATAAGCAGAGGAAATTTGG 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 CAGAAACGACCAAATGCAAAATACGTGTAGCAGCCTGAGACCGGCCGTCTACTGAAACAAAGGATGCAGTTCAG 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 TCGGAAACCACGCTTAGCTGAGTAGCTGTCTTTAGCCATCCAGGCCCTGAGAACCAATGAACAACCCAGCTTGG 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 CCGCTTAGAACATTTTTTCTATACTTGAGTTAAATAGATATCCAAGAACCATTACTCGTTTTTAATGTGGAGAA 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 GTCGGTATTCTATTCTCGTGTTCTATGTTTTTTAAAGTGGCAATTTGAATTATTTCGTGCGATAGAAAACCTTA 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 AACACAAAGTAACGTTTCTAACAAAAGGGCTGTCGATCAAGTGACAAACACGTCCTACTTTTAGATACAAGCAC 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 GACTGAGGCAACGGCACGAAGACGCCTAAAGTGGGCTGCTGGGGAGACAAGATCTGGCCGCGAATGGAACTCGC 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 GGCAGCTCATTAACGGGACCGTCCAGCAGGAAGGTGGGTTGGCAGCCTTCTCCCAGGGCTCCCCACGATCCCTA 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 CCCCTGGTGTGGCGTGGCCTTCCTCCTCACATGTCGTCTGGACCAAGCAGTGTGTTGTTCTCATCCATAAAGAG 3404
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3405 TGATGGGCCGGGCACGATGGCCACACCTGTGATCCCAGCACTGTGGGAGGCTGAGGCGGGAGGATCTCCTGAGC 3478
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3479 CCAGGAGTTTGACACCAGCCTGGGTAGCATAGGGAGACCCTGTCTCTACAGAAAAAAAGTTAGCCAGGTATTCC 3552
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3553 AGAGGCTGAGGTGGGAGGATCGCTTGAACCCAGGAGGTGGAGACTGCAGTGAGCCGTGATCGCACCACTGCACT 3626
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3627 CCAACCTGGGCAACAGACTGAGACCCAGTTTCTAAAACAAATAATAAAAAGGCAGGGTGCAGTGGCTCATACCT 3700
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3701 GTAATCCCAGCACGTTGGGAGGCCAAGGTGGGCGGATCACTTGAGGTCAGGAGTTCGAGACCAGCTGGCCCACA 3774
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3775 TGGTAAAACCCCATCTCTACTAAAATGCAAAAATCAACCGGGCACAGTGGCACACGCCTGTAATCCCAGCTCTT 3848
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3849 CAGGAGGCCGAGGCAGGAGAACTGGGAGGCAGAGATTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGGCTG 3922
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3923 GGTGACAGAGCTAGACACCATCTTGAAAAAAAATAAAAGTTAAATAAAAAGAGTGATGAGGCATCCTGAGATTC 3996
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3997 ATTTATAAAATGCCGTGATTCAGGTCTCAGGGCACTGTCGCCCCTACTCACTTTGATGAAGCCAGTGCTGGGTT 4070
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4071 GCTGCTGAGGTGGGGAGGTTCATGGGCCAGGAACTGAAGGCAGCCATGAGAGCCAGACCCCTCCACCACCCCCA 4144
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4145 AGACAGCAGGGAACTCACTCCAACAGCCACCCTGGGATGCTGCCACAGCTGAGCCTGGAGGTGACCGTGACCCT 4218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4219 GGCTGACGTCGGACTGCAGCTTTGTAAGGGAGACTGAGCCGGGACCCAGACCTACAAAAGCTGAGATGATAAAC 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 ACTGTTTTAAGCTGCTGTGTGTCGCAGTGACTCGTGTGGTAGTGGATTTCTAGCAGAGCCGTCGTTCGTGTCTG 4366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4367 CCTTCTCTCAGCTCAACACTCTGTAGGGCCACCCATGCCGTTGTGCATGTCAACGGTGGATTTTTTATTGCGAG 4440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4441 TAATATTTCATTCCATTGCATGCTCACACCTCGGTTTGTTTAACTGTCTACCTGTTGATGAGCTCTGGGACATA 4514
Query 187 -------------------------------------------------- 186
Sbjct 4515 TGCAGTTCTGGGCTATTATGAGTAAAGCTGCTTTTAACATTTAAATACAA 4564
