Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_001743802.2
- Aligned Length:
- 5116
- Identities:
- 68
- Gaps:
- 5041
Alignment
Query 1 ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGAGACGGGGTTTCA 147
.|||| |||||||||||||||.|||||||||||||||
Sbjct 1 -------------------------------------GCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCA 37
Query 148 CCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------- 186
||.|.||||||||.|||||||.|||||||||||||||.|
Sbjct 38 CCATATTGGCCAGACTGGTCTTGAACTCCTGACCTCAGGTAATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGA 111
Query 187 -------------------------------------------------------------------------- 186
Sbjct 112 TTACAGGCGTGAGCCACCGTGCCCGGCCTGAAGACACTTCTTTTGCAATGCATTTACCACTTTAGAAGTGGTTG 185
Query 187 -------------------------------------------------------------------------- 186
Sbjct 186 CTTTCCTCTCAGAATAGGTGTGTTGGGGGAACACTCAGAATGGGAGGGCAAGCAGGGAGTCCACTCTGTGTGCA 259
Query 187 -------------------------------------------------------------------------- 186
Sbjct 260 GGGTGCAAAGCAACTTCCACATCAACTTAATACCATCAGATTGCTCAGTAGTAGAGACATTTTATTGCTGTGAT 333
Query 187 -------------------------------------------------------------------------- 186
Sbjct 334 CCCATTAACTCTGACATTGCACTGTTCTATTCTTGGACACTTTCTTACTATCGAAAGCCAGCAAAGCTTAACAG 407
Query 187 -------------------------------------------------------------------------- 186
Sbjct 408 CTGCTGAGAACCACAAAATAAAAAGAAATAGCTTTGGTCTTGTTGGATTGAATTTTTCTTTTTTTGGCCTCTTT 481
Query 187 -------------------------------------------------------------------------- 186
Sbjct 482 TTCCCTTTGGGCTTCAACTATTTCCTCTACCACAAGGGCTGACGTCAATGCTGTCACCAGGCACATGGACCAAC 555
Query 187 -------------------------------------------------------------------------- 186
Sbjct 556 TGGGCTTGTCTGGGGACAGAGAGTCTGTCAAATCTTACCCACACAGGGTGGGAGGTCCCACCATGGTGCAGTGA 629
Query 187 -------------------------------------------------------------------------- 186
Sbjct 630 GAACAGACCAATGGAACCAGCATTTCTCTGAAAAGACAAGCAGAGGGTTGACCCATCACATGCTCACTCCTCTG 703
Query 187 -------------------------------------------------------------------------- 186
Sbjct 704 CCAGTATTGAAACTGTCCTCTCCTTTGTGTGCAGAAAGGAGGCCAGGACCAAAAGTCACCAACAAGTGCATTGG 777
Query 187 -------------------------------------------------------------------------- 186
Sbjct 778 TCAGGGTTTTCTACCTATTCCATGAAACAAACTTTCAGCCAATTAAATGAAAAACCTTTTAGCACATGGTTAAC 851
Query 187 -------------------------------------------------------------------------- 186
Sbjct 852 GTTAAATTCTCATTCAGGCCTTTGAAACTGACTGAGGTTTGGCCATTGCTTAAATTAGATGCCAAAGTTCTGTC 925
Query 187 -------------------------------------------------------------------------- 186
Sbjct 926 TCGTCTTTTCCCAAGTGGCTGGAGACAGGTTTGTGACAATGTCCCAATTCCTCTATGACTGGAGGAGGGAGTGA 999
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1000 GGGTGCCCATGGGCTGTTTCCCATTCTCAGGAGGGAGGAGGGTGAGTCCCTGTGCTGACTAGGGGCTGGGAAAC 1073
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1074 TTGGTGACATGGTACAACCTCACTTGCCACAATTGCAGAGAAATGTGTTGGTGGCTGGCAGTCCAAGTGCCACT 1147
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1148 GAGTTTCTCTCTCATGCCACCTTGGCTTACGGGCCATGACTTGGCCACCTCTTAAATTCTTTCTAAAATAATCA 1221
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1222 GTATGATTATGCAAAGTTTATAAAAATCAGCAAAATTCAGACAAGGTAAAGGTAGAGAGATGAAACAGAGCTAC 1295
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1296 ATGTCTATGTATTAGAGAAGCTTTTGAGATTCATTATTTAGATTCCTAATAAGAAAAACTCTATGATGGAAGGA 1369
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1370 AGGGGAAATCTTCCTATAAGTTTAGTGCCTGCTGGACAAAGTCTTTGTATGTGTACTGCCAAGCAATAGATAGA 1443
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1444 ATCCCAGAACTAGAGGCTTTGAAAATACAGCCACATCTAACAGGCAAGGCCAAGCTTTGCTCTGCTCAGCACCT 1517
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1518 GCTGCCCTTCTTTCCAGGACATTCTTTCTCTTGCTCATCATGAGCCCCAGTTCCTGCCCTATGAGGAGCTACAT 1591
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1592 ATCCAGGCCTGATCTCACACATGCATCCTGACTTACTGACGTCTCTCTACAAGTTGACTACTCTTTTCCAAACT 1665
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1666 CACATGTCTAAAGTAGAATTATTTTCTCTGCCAATCTAGGTTCCGTTACCAGCTATCACGCTTCTTAGAATTGC 1739
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1740 CATCATTCTTCCAGCCTTCTAGGTGCAAATCCTTAGAGTCAGTCATCCTTGAATTTTCTCTCTCTTTCATCATT 1813
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1814 TGTAATCAGTCACCAAGCACTATTGAACATTGCTTGTCAAACCTTCTCTGCATGCTCCTTCCCTACACACCCCT 1887
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1888 TGTTATAACCCTATCCATGACTAACCCTCCCACCCAAAATACTCTTTGCTGGTTTCCCCACGACAGGAACTAAC 1961
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1962 TTCCGTGCCAGAATAAGCCACCTAAGACAACAGTTGGAGAGATCACCTTATCACATATGAGTAATGTGACTCTG 2035
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2036 AGAAAGTTATATAACATTTCTGAATCTCAGTTTTCCTCATCAATGAGAACAACACTCATATCACTGGGATACTA 2109
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2110 GGAAACAGACATATGTGTCAAATACTTGATAAAGCCCTCTCCCAAGATGCATGCTATGATTATTTAGGGCGATA 2183
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2184 TTATTTTGGCCACTGTTGCCCCCAAGTAATTTCTGGTTTCCAGTATGATTAACTAATCTGATTACATCACACAA 2257
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2258 TAGTCAAAGAATTAAGCAGCTGAACAATTGCAAAGAGCTTTTCCTCAGTGGAGACACCATTGCAAAGAGCAGTA 2331
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2332 AGGGGTGAACGATAACAGGCTGCATCCCACGGTAGTGGGTATCATATAATCTGGTCTTCAAAATGAACCTATCC 2405
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2406 TTTTTCCTCCAACCACCACTTCCCCTTTCTCTGTCATCACTGGCAATTTTCTCTCCTTTTTTTCCTCTTTCCTA 2479
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2480 ACCTTTTCTATACCTCTATTTCCATGAGACAGAAAATCTTATGTTGCCGTTTTAATGAGATCTCTGATTTTCTT 2553
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2554 TTTTTTTTTTTGAGATAGAAACACCCATTTATAATGCTTAATTATATCACCTTTGATATTATTCATTAGTTATT 2627
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2628 TCCTCTAGCAATGTGTTATATTCCAAACCACTGAAGTCAAGACTTAACCTTTTGTGACTGCTGCAGCTTAAGGT 2701
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2702 ACACATTAGTGTTCAATGAATATGTGATTGATTTATGAAGAGCATCACGCTTGGTCATTACTAACATACTTGAG 2775
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2776 TGATGTCTGGTATGTACTCACACGTGAATATTCTTCCTATAGTTTAACTTGTGTAAGTTTTAGCTTTTCAACTA 2849
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2850 AGTGGAAAACCATTTAAAGGCAAGCATCTATCCTCTTATCAGCATTCTATCAGTGCTAGCACACAGTAGGTGTC 2923
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2924 ATAGAAACTCACTACATTCCCTAAACATAATAACAATTGCTTATGGAGCACTTACTAAATGCCAGGCACAGGAA 2997
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2998 AGTCTGTAACTACTTGGCATGAAATAGATCTTTAATTATAACAACAGCTCTGTCATGTGGGTTTCATAATATCT 3071
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3072 AGTTATACAACAGTAAGTTGAGATCACACAGGTAGTAAATGGCAGAGCCAGGATTTAAACTCAGGCTTGCCTGA 3145
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3146 CTTCAAAGAATGTGTTCATAGCCCCTCTCTGTCCCTAACTCTCATACTTCCCACTGTTTACATATTCTACAAGC 3219
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3220 GACTCTACTGAAAGGGAGCCTAGTTTTGTCTTTCACTTTTAATACATTTTCATGGCAACTCATATTTTTAGTGA 3293
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3294 ATATTTGTTCTCTAGCTAAAGATGGATCATGTATTCCTTCTGAACCTTGCCTTGTTTTGTTTTGGCCATTGATA 3367
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3368 GTTATTCTAGGCATGGTCTCTTTGACAATGAATCTCCTCAAAAGACAACACAATAAATTATGAAAAGAAGAGAC 3441
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3442 TATAAATTATAAACTGAGTTAATCTGCATCTCTTAGGGAAGGAAGTTTTGGACTCTGGAAGAAGATCCTCTACA 3515
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3516 TTCTCATTTTAAAACTGTACTATCTCTCATATTACGGGTGAATTCTCAACAGGAAAGTTATTTGTGGTAGCAGG 3589
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3590 TTGTGTTTTCCAAAGATGGTCATAATGTTTCCCACCCCACATACTCTCCTGTAACCTTGACAATGTTCCATTAA 3663
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3664 GGAGTGTTCCCTCTGTGTTCTCTCCCTTCAATCCTGGGCAGGCTTTAATGATTGTCTTGACAAATATAGTACAG 3737
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3738 GTTGTTGTGTATCGCTAATCCCAAAATATCCAAAATCCAAAACACTTCTGGCCCCAAGCATTTTGGATAAGGGA 3811
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3812 TCCTCAACCTATGTGGTGGAAGTAAGCAGTGTGACTTCTGAATTAGGTAACAAATATGCTATGCGCTTCTACTT 3885
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3886 TGCTCTTGCAGAATGCTCATGCTTGGAACCCTATGTCCAAGTTGTAAGGAAGCCCAAGCAGCCCATAAAGAGGC 3959
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3960 CCACGTTAAGAAGAACCAGGACCCACAGTCTAAGTGAACTCTCAGCTAATAGCACCATTTTGCCAACCATGAGT 4033
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4034 CAAACTGGCAGCTTCAAGGACCTTGGCTGAAATTGGTCCATTTGGATATGTGTGCTTGTTTCTGCAATGTCCTG 4107
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4108 AATGACTGTGGGAAAGGGCTTCACAAGGCTTCATAAGACACCTGGATCTCATATCTGCTTCTGCATTCAATCTG 4181
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4182 TTGCACCAAGTTGTTTTGACTGAAGGGTATGAAGAAAAACTGGCCTCATCCAAATATGCGGTTGGAAAAGGGTG 4255
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4256 GAGTATTTTAACAGCCCTTCAAATAATTGGTCCCAGTGATCAAGCTTTGTCTCCAGCATCATTTTACCCTTTAT 4329
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4330 TCTTGGAAGGGACACTGGAGGCGACTGATTCCAACCCCTCGACTTGAAAGTTGAAAGATGCAAAGCACAGAGCA 4403
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4404 GGGGATGACATGCTCAAGGCCCCATCACCAGTCGGAGGCAGACCTGCATAGAACTTGGGACATAAATGTAGGCA 4477
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4478 CACACAAAACCCAGAGACATTCCACCGACATTTAAAATCAAGAATCCTCCCTGATATAGTATGACCTTGTAAAT 4551
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4552 GATGCAAAGGGTTTGAACAATTCAAAACAAACAAACAAACAAAAAAACAGGTCTAGGATAAGTTTTTTCAAAAT 4625
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4626 CATCAAATATAAATTTCAACCCAATTTTTTAATTTCATAAAACCAAGGTTAAAAGAGGTTGAGTGATTAGTTAA 4699
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4700 AAGTTATGGGCAAGTGATGGTAACGTCAAGCCTCTAATTCATATATTTGCCAAGCTCTAGCTTTGAATGATATT 4773
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4774 GTAACTCGAAAGGAATAATGTTGTTCTTTTTAGAAAATAACATGGTCATGGTAGACCACTTGGAAAAATATACA 4847
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4848 TAAACATAAGGACAAAGTGACCCATACATTAAAGATAATCACTGTTAATATTTTTATTAAATGAAAAGCATTAC 4921
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4922 ATGTAACTTTACCTAAGTTTATCAGAAAAAAAGAATTAAAGAGGGTCGGTATGGTGGTTCACGCCTATAATCCC 4995
Query 187 ---------- 186
Sbjct 4996 AGCACTCTGG 5005