Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_001753751.1
- Aligned Length:
- 4744
- Identities:
- 160
- Gaps:
- 4558
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTATATTGAAACATTACAACCATCTTTTGATGGCAACACCCTGAGGACCTCCCTTTTCCAGATGGGGAAACTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCCCAGAATTGCTAAGTGGCTTGCTTGAGTTGACACAGGGAGCTCCAGGACTCACCCTCAGCTGAGCCACCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCGGGAGCATGCCTCTGCGCCACTGGGGGATGGCCAGGGGCAGTAAGCCCGTTGGGGATGGAGCCCAGCCCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCTGCCATGGGAGGCCTGAAGGTGCTTCTGCACTGGGCTGGTCCAGGCGGCGGGGAGCCCTGGGTCACTTTCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGAGTCATCGCTGACAGCTGAGGAAGTCTGCATCCACATTGCACATAAAGTTGGTATCACTCCTCCTTGCTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATCTCTTTGCCCTCTTCGATGCTCAGGCCCAAGTCTGGTTGCCCCCAAACCACATCCTAGAGATCCCCAGAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCAAGCCTGATGCTATATTTCCGCATAAGGTTTTATTTCCGGAACTGGCATGGCATGAATCCTCGGGAACCGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGTGTACCGTTGTGGGCCCCCAGGAACCGAGGCATCCTCAGATCAGACAGCACAGGGGATGCAACTCCTGGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCAGCCTCATTTGAGTACCTCTTTGAGCAGGGCAAGCATGAGTTTGTGAATGACGTGGCATCACTGTGGGAGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCGACCGAGGAGGAGATCCACCACTTTAAGAATGAGAGCCTGGGCATGGCCTTTCTGCACCTCTGTCACCTCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCTCCGCCATGGCATCCCCCTGGAGGAGGTGGCCAAGAAGACCAGCTTCAAGGACTGCATCCCGCGCTCCTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCCGGCATATCCGGCAGCACAGCGCCCTGACCCGGCTGCGCCTTCGGAACGTCTTCCGCAGGTTCCTGCGGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTCCAGCCGGGCCGACTCTCCCAGCAGATGGTCATGGTCAAATACCTAGCCACACTCGAGCGGCTGGCACCCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTTCGGCACAGAGCGTGTGCCCGTGTGCCACCTGAGGCTGCTGGCCCAGGCCGAGGGGGAGCCCTGCTACATC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGGGACAGTGGGGTGGCCCCTACAGACCCTGGCCCTGAGTCTGCTGCTGGGCCCCCAACCCACGAGGTGCTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACAGGCACTGGTGGCATCCAGTGGTGGCCAGTAGAGGAGGAGGTGAACAAGGAGGAGGGTTCTAGTGGCAGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGGCAGGAACCCCCAAGCCAGCCTGTTTGGGAAGAAGGCCAAGGCTCACAAGGCAGTCGGCCAGCCGGCAGAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGCCGCGGGAGCCACTGTGGGCCTACTTCTGTGACTTCCGGGACATCACCCACGTGGTGCTGAAAGAGCACTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGTCAGCATCCACCGGCAGGACAACAAGTGCCTGGAGCTGAGCTTGCCTTCCCGGGCTGCGGCGCTGTCCTTCG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTCGCTGGTGGACGGCTATTTCCGCCTGACGGCCGACTCCAGCCACTACCTGTGCCACGAGGTGGCTCCCCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGGCTGGTGATGAGCATCCGGGATGGGATCCACGGACCCCTGCTGGAGCCATTTGTGCAGGCCAAGCTGCGGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGAGGACGGCCTGTACCTCATTCACTGGAGCACCAGCCACCCCTACCGCCTGATCCTCACAGTGGCCCAGCGTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCCAGGCACCAGACGGCATGCAGAGCTTGCGGCTCCGAAAGTTCCCCATTGAGCAGCAGGACGGGGCCTTCGTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGGAGGGCTGGGGCCGGTCCTTCCCCAGCGTTCGGGAACTTGGGGCTGCCTTGCAGGGCTGCTTGCTGAGGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGGGGATGACTGCTTCTCTCTGCGTCGCTGTTGCCTGCCCCAACCAGGAGAAACCTCCAATCTCATCATCATGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGGGGGCTCGGGCCAGCCCCAGGACACTCAACCTCAGCCAGCTCAGCTTCCACCGGGTTGACCAGAAGGAGATC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACCCAGCTGTCCCACTTGGGCCAGGGCACAAGGACCAACGTGTATGAGGGCCGCCTGCGAGTGGAGGGCAGCGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGACCCTGAGGAGGGCAAGATGGATGACGAGGACCCCCTCGTGCCTGGCAGGGACCGTGGGCAGGAGCTACGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGGTGCTCAAAGTGCTGGACCCTAGTCACCATGACATCGCCCTGGCCTTCTACGAGACAGCCAGCCTCATGAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGGTCTCCCACACGCACCTGGCCTTCGTGCATGGCGTCTGTGTGCGCGGCCCTGAAAATATCATGGTGACAGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTACGTGGAGCACGGACCCCTGGATGTGTGGCTGCGGAGGGAGCGGGGCCATGTGCCCATGGCTTGGAAGATGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGGTGGCCCAGCAGCTGGCCAGCGCCCTCAGCTACCTGGAGAACAAGAACCTGGTTCATGGTAATGTGTGTGGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CGGAACATCCTGCTGGCCCGGCTGGGGTTGGCAGAGGGCACCAGCCCCTTCATCAAGCTGAGTGATCCTGGCGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGGCCTGGGCGCCCTCTCCAGGGAGGAGCGGGTGGAGAGGATCCCCTGGCTGGCCCCCGAATGCCTACCAGGTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGGCCAACAGCCTAAGCACCGCCATGGACAAGTGGGGGTTTGGCGCCACCCTCCTGGAGATCTGCTTTGACGGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGGCCCCTCTGCAGAGCCGCAGTCCCTCCGAGAAGGAGCATTTCTACCAGAGGCAGCACCGGCTGCCCGAGCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTCCTGCCCACAGCTGGCCACACTCACCAGCCAGTGTCTGACCTATGAGCCAACCCAGAGGCCATCATTCCGCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCATCCTGCGTGACCTCACCCGGCTGCAGCCCCACAATCTTGCTGACGTCTTGACTGTGAACCCGGACTCACCG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCGTCGGACCCTACGGTTTTCCACAAGCGCTATTTGAAAAAGATCCGAGATCTGGGCGAGGGTCACTTCGGCAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGTCAGCTTGTACTGCTACGATCCGACCAACGACGGCACTGGCGAGATGGTGGCGGTGAAAGCCCTCAAGGCAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACTGCGGCCCCCAGCACCGCTCGGGCTGGAAGCAGGAGATTGACATTCTGCGCACGCTCTACCACGAGCACATC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATCAAGTACAAGGGCTGCTGCGAGGACCAAGGTGGGCGGGACCCGGCGAGTCCTAGAGACTTGAGGGGGCGTGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTAGAGCGTGGGTGTGGCCTTGTGGGCGGGGCCAGTCTGGCCTAGCCAATTAGAGACTCTCAACCCCAGGCTGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGTACGCGGTTCTTGGCATCTGGGTGAGCGTGGCTGGGCTGCCTCCTTCCCATCTGGGGGGTGCTACCTGCTGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GGCCAGGATGGACGGGAGCCACCAGCAGCTCCCTCAAGTGAGAATGGGGTTCTGGATGGGTCCATCCCACCTGA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GAACTGGGTCTAGTGTGCGCGGGTCTTGGCCTTCCCTCCCGACCTTGGAGGGGCTCTGCTGGGCTCAAGGTAGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CGGTCCCCGGCCCGCCCTCTATCGTCCCCCACCGGGGCCGCCCCTCTCCGCGGCAGGCGAGAAGTCGCTGCAGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGGTCATGGAGTACGTGCCCCTGGGCAGCCTCCGAGACTACCTGCCCCGGCACAGCATCGGGCTGGCCCAGCTG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTGCTCTTCGCCCAGCAGATCTGCGAGGGCATGGCCTATCTGCACGCGCAGCACTACATCCACCGAGACCTAGC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CGCGCGCAACGTGCTGCTGGACAACGACAGGCTGGTCAAGATCGGGGACTTTGGCCTAGCCAAGGCCGTGCCCG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AAGGCCACGAGTACTACCGCGTGCGCGAGGATGGGGACAGCCCCGTGTTCTGGTATGCCCCAGAGTGCCTGAAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GAGTATAAGTTCTACTATGCGTCAGATGTCTGGTCCTTCGGGGTGACCCTGTATGAGCTGCTGACGCACTGTGA 3848
Query 1 -----------------------------------------------------ATGCAGTGGCGCCATCTCAGC 21
.||||.||||.|.|||||.||
Sbjct 3849 CTCCAGCCAGAGCCCCCCCACGATGGAGTTTCACACTTGTATCCCAGGCTGGAGTGCAATGGCACAATCTCGGC 3922
Query 22 TCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCG 95
||||||||||||||..||||||||||||..||||.|||.||||||.||||||..|||||||||||||||.||||
Sbjct 3923 TCACTGCAACCTCCGCCTCCCAGGTTCAGACGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGGCG 3996
Query 96 TGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTC 169
..|||||.||..|.||.|||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||
Sbjct 3997 CCTGCCATTATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTC 4070
Query 170 GAACTCCTGACCTCAAG--------------------------------------------------------- 186
|||||||||||||||.|
Sbjct 4071 GAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGC 4144
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4145 CTGCCTTTCATTGCCTCTTGAAAAGAGCTTGTCTTGTTTATACTGTAGAAATTCCTTGAGCTCATAGGCATTGC 4218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4219 TCAGGGTCAGATGACAGTTCTGAGACTCACTGAGTTGCTGGAACGAGGGGAGAGGCTGCCACGGCCCGACAAAT 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 GTCCCTGTGAGGTCTATCATCTCATGAAGAACTGCTGGGAGACAGAGGCGTCCTTTCGCCCAACCTTCGAGAAC 4366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4367 CTCATACCCATTCTGAAGACAGTCCATGAGAAGTACCAAGGCCAGGCCCCTTCAGTGTTCAGCGTGTGCTGAGG 4440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4441 CACAATGGCAGCCCTGCCTGGGAGGACTGGACCAGGCAGTGGCTGCAGAGGGAGCCTCCTGCTCCCTGCTCCAG 4514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4515 GATGAAACCAAGAGGGGGATGTCAGCCTCACCCACACCGTGTGCCTTACTCCTGTCTAGAGACCCCACCTCTGT 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 GAACTTATTTTTCTTTCTTGGCCGTGAGCCTAACCATGATCTTGAGGGACCCAACATTTGTAGGGGCACTAATC 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 CAGCCCTTAAATCCCCCAGCTTCCAAACTTGAGGCCCACCATCTCCACCATCTGGTAATAAACTCATGTTTTCT 4736
Query 187 -------- 186
Sbjct 4737 CTGCTGGA 4744
