Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15487
Subject:
XR_001753848.2
Aligned Length:
4409
Identities:
161
Gaps:
4223

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTATATGTGGCATTTTGCCTGCAACCTCTTGTTTAAATGGTCAACCCTAAGGGAGGCAGAACAGCAACCCCTGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTACCCATGGGGAAACTGAGGCTCAGAGAGGGGGCATGAGTGAGTGAGAGAAAAAACTGATTCAATCTCAAGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGTCTGATCCAAATGCTACGGCTGCCTATGAGGGCGATAATTCAGAATGGCTACTTCAGCTTCCCCAGGGGCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGAGTCCATGGCCTTCAGGGGAGGGAGGTTCTTCTGCAATCATCAGAAAACATATGGCTGCCCCCTAGTGAAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCTAAACATCCATCATGGCCCTAGCTACAGTGCCCCTTCCTGGTACATCTTCCCTGATCCATGAGGCAGGGTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGCTTTCCCTAGCCCCAGTTGCTCCCTCTGCCCTAGCCCTGAACCTGTGTAGCACGGGTGGCCAGTGCCTGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCTGTTTCTCTTCCTCTGGCCTGGAAGCCCCTCCAACTAGACAGAGGAGTTAAAGTTACCTCTCTGGGATCCTA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCATCACCCAGCACAGGACACAGCACATGGGGACCACTGGCAGCATTTGTTGACTGACTGAGGGACCTAATTGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTGGAACCAGGCCCACCTGGGAACCCACAATCCTCCTCTGGGTTCCTGTATTTGGGAAGCTCCCTCCTAGGTCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCCCTTGGAAGGCTGGCTTAGCTGGGCCATGGTGCATCCTGGGAAATGTAGTCTAGAGTGGGCCTTGCCTCCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTGGGGCCCTGGGGTGGCCAGCTTTGGACCCTGGGGCCAGATAGAGAAGGAGCATTGAGGGTGGCAAGTAGTAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGCCCCATGTCCCTGCCAAAGAGTCCTAAGGGTGGTCCCCAGCCTCCCAAGTCTCTTACTTTTTCTTTTTCCTT  888

Query    1  ------------------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACC  32
                                                      .||.|||||||..||||||||||..|||||||
Sbjct  889  TTTTTTTTTTTGACGGGGTCTTGCTCCGTCCCCCAGGCTGGAGTGTAGTGGCGTGATCTCAGCTCCTTGCAACC  962

Query   33  TCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTAC  106
            ||...||.|..||||||||||||||||.||||||.||||||||||||||||||||||||||||||.|||||.||
Sbjct  963  TCTGCCTGCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGAGCCACCAC  1036

Query  107  ACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGAC  180
            .|.||.|||||||||||||||||||.||||||||||||||.||.||||||||||||||||||.|||||||||.|
Sbjct 1037  GCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGGC  1110

Query  181  CTCAAG--------------------------------------------------------------------  186
            ||.|||                                                                    
Sbjct 1111  CTTAAGTGATCCTCCCGCCTCGGTCTCCCAAAGTGCTGGGATCACAGGCGTGAGCCACCGCCACTGTCTTACTT  1184

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1185  GTCCTAATGTCTGCCACTTCACCTGGATGTCCCTGGAGGAGAGGTGATGAAGGACCGTGATAACGAAAAAGGAT  1258

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1259  TGCGTGCCTGGGTTCCTATGGTCACACACCCGACCCCAGCACCACCATGCATGATGGTGAGGGTGTCTAGGGTG  1332

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1333  AAGGGTCTGTTTTGGGATAATTCAGCCAAAGGACATGGGGCCGGTGGCTGGGGCCTGAATCCTGGGCTGCTTTG  1406

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1407  AGCCTTAGTTTCCCTACTGCTGCTACATGAAGACAGGGAGGGAAGAAATGCACGACCATGGCCAAGAGAAAGCC  1480

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1481  ACAGCCCAACCAAATCACGGCTGGGTTTTGGAGGAGTCACAGTATGAGAGCCCACAACCCCTTAAATACCTGAG  1554

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1555  ACTCTCAGAACCTGCTATCTCAAACACGACAGCAGTTCAGAAAACCCACAGTACCTGGAAATTGAAAAAAAAAA  1628

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1629  ATCCAGGAGATCACTTGGGGCTGACCAATATCAGGATTATTTATCCAGGATTCTGCAAAGACAGCCGTCCAACC  1702

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1703  CCTCTGGCCTGCCTCCCACGAGGGGCGGCTCACCACTCCTTCCAGCAATGCATTTGGTTTCCAAGGAGCCTGTC  1776

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1777  TCCTCGTAGCTACCCTTCCTCAAGATCTGAAATGTGACTCATGCCCCTCCCCCTGCTCTATAACCTTCCATGGC  1850

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1851  TCCCCATTGCCCTTGGGATAAAGTTTGCTCCTTGGCTTGGCATTCAAGGCTACTGCCTACCTCATGGTCCTCTT  1924

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1925  AAATAGTCTAGCCACTCAGGGCTCCTCCAACATACCCCACTGTGATGATCCTTGCTGTTCCCTCTGCCTGCAAT  1998

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1999  GCCTGTCCCCCTCTCCTCCAGGCAGAATCCTTCTCCTTCAAGCCCAGTCCCAGTACTCCCTCCTCCAGGCAGCT  2072

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2073  TTCCCTGCTCCCACCTGTCCTGACCACTGCCCTGGAAGTTTCTCCCTCCAGCATCTCCCTTTCCGGGCCCACAG  2146

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2147  GACAGGGCCACGCCCAGGGTCAGCTCGGGACACCTTCCTTCCCAGGAGACGGGCGGTGACCAGCAACATCCTTC  2220

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2221  AGTCCCCAGGGATCCAGCTCACCTGTCCTGCAGGCTGACGTCATGGTCACCTTTCCAAGGGCAGTTTGATTTCT  2294

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2295  ATCTTCCAGGCCCAGTCCTGGTAACCCCAGCAAACTCCGGCTGCCAGCCTGGTGTGGCCACTGCAGAGGACATG  2368

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2369  CCACATCTCCAGCCCCTTCTATGCCCATCGGTCAGAGGCGAGGACTGAGGTCTCAGGGGGAAAGGCCCCTCCTG  2442

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2443  GGGGGACTGGATACCTAGGCTTGGAGACAACTCACTTCAAAGCAGAGAAGGTGACACAGACCCTAAGATCCTGT  2516

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2517  GGGGGCTCAGCCCCAGCCGAGTCTGGTGGGGGAACCAGAGGCAAAATGGGGCAGGCACAGATCAAGACAGTCTC  2590

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2591  AAGCGACCCCTCTCTGCCTCACCTCCCCCAACTCCAGTCCAAAACCAAAGCGCATCTCCTGGGGAGACTGAAGC  2664

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2665  CCAGAAAGGACTAGGGACCAGCCTGAGGCCACACAGCTAAGCGCCTCCTCTCAAAGCTCCTGCATAGCCCAGAG  2738

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2739  TCAAGGGGAAGAAGGGAGGAGCAGAGCTTCAGGGCAACCCTTAGGAGGAGCTGGGATGCAGGAGAGCTCTTGGG  2812

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2813  TTTCAACGGCTTCCTCGGGCCTCAGTTTCCCCACCTGCTGTTGGGATGGGCCGGTTCAGAACAGACAAGAGGCT  2886

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2887  GACGCCAGGCTGCCACCTACCCAATATCCGAGGCGTCTCTGTGTGGGTGGCAGTGACTCCCAGACAACTTCCCG  2960

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2961  GAGAGTTTAAGACCCCCTCCCAGGTGAGTTCCAACTCAGCCTTGGCCCCAGCCGTTCCCCACCACCCACCCCAC  3034

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3035  AACCTGTGCTCTCCCTATGTAGAGTTTAAAGCAATTGTTCAGGTACATCCTGAAGTCCCGCGCCTGAAAGAAAC  3108

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3109  TGGTCTCCCGGGATGTGGGAAAGGGTTTGGGGGCAAGGGGGATGCCCCAGGGGTCCTGAATTTTTATTTTGGAG  3182

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3183  AGGGAATTTGGACCTTCTCACAAGCTGAAGGAACACAGAAAAACAGAAATGCAATTTTACAAATGGGGCAGGGG  3256

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3257  CCCCCTTCAGTCACCATAGCCATGAGTCCCTCTCTCCCTCCTCCCTCCTTAAACCCAAACCCAGAACCCCAAAG  3330

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3331  CCTCAGAGCACCCCAGTAACTCCAAGTCCCCGTTCCGCTCCAGTCTAGGGGTCAAAGATGACAGCCTCAGGTAG  3404

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3405  AGGATGTCAAAGACCTCAGCGAGAGAGAGAGGGCCACATGGCGGCGGGGGTGAGGGTCTGCGAATCCCTCCCCC  3478

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3479  AACCCCAGGACTCTTGCAAACGCTCCTAGCTCCAGCATTAACCCGGCCGGGGCAGAGGTGGGGGTTCATGACAG  3552

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3553  TAGCGCCCCCTCTGGGAGATGCCCCAAACTCGGAGAGCGCCCAGAGGCGGAGAGCAGGAGAGGAGGGCACGTGA  3626

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3627  CCCCCACCCCGGGGACCAATCAGCGCCCGCGGGAGGGGGCCACACTCGGCGCCCCCCACCCATCCCGGCGCGCT  3700

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3701  TGGAGATAGACGTTTTCTTTGTCCTTTTGTCAGCTCTTGGGGGCCCCCGAACCCCCAGGCCCCCACTGCAGCGG  3774

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3775  GGGGGATCCGGACCGGCCGGCCCTCCCCTCCAACACCACTGCGACCCCTGCCCCGCGGCCTGGACCCGCGACTC  3848

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3849  GTCCTGTTCTGGGCTGGACAGGAGGCCGGAGAGGACTCGGGCGCCCAAGGTGGAAACTGAGACCCAGAGAGCCG  3922

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3923  TGACTTGACTGATCCCACAGCCAGGAAATGGTGGAGCCTGGATTTGAACCCCAGCTTTTAAGAAGAAGGTGCCA  3996

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3997  CTGTCCTGGAAGAACTCTCAGGACAGCATTAGTGTCTCAGGGATCCCCCTAATCGGAGGGGCCTTAAGGCAACC  4070

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4071  TAATCATGATTGTCACTGAAGATCCAGGAGGGCTTCCTGGAGGAGGAGGCAGCTCCATTCTGAAATGCCAAGGG  4144

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4145  TACAGCTTTATTGGGACAGCCAGTGTCTCTGAATATGTAGGTTTTGCACAGAGCTTGTACTGCCCCAGGGCCTG  4218

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4219  TACACTGCCTGTCCCCTCTGCCTTGTGCACTCTTTCCCTAGATGTCCAAATGGCTCCTTTCCTCACCTACCCCA  4292

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4293  AATCTCAATTCCAGTGTTTCCCCAGCCTCCCCTCATTTCAGTAATCACTCTGCAGTGAGCTAGGATTGCGCCAC  4366

Query  187  -------------------------------------------  186
                                                       
Sbjct 4367  TGCACTCCAGCTTGGATAAGAGAACAAGACCCTGTCTCTTAAC  4409

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