Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_001756631.2
- Aligned Length:
- 2817
- Identities:
- 160
- Gaps:
- 2631
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTAAAAATAATAAATGAATAAAATAAATATATAAATAAAAATTTGACCGACAGCTTAGTAAGGATTATATAGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGTCTGCTACTGTTTAAAAAGGCTTTTCTTTTTTTTTTTTCTTTGACATAGAGTCTTACTCTGTTGCCCAGAC 148
Query 1 ----ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCC 70
.|||||||||.|.||||..|||||||||||||||||.||||..|||||||||.||||||.||||||.|||
Sbjct 149 TAGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCATGCCTCAGCC 222
Query 71 TCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTT 144
|||..|||||||||||||||||..|||||||||.||||....|||||||||.|||||||||.|||||.||||||
Sbjct 223 TCCCAAGTAGCTGGGATTACAGATGTGTGCCACCACACATGGCTAATTTTTTTATTTTTAGTAGAGATGGGGTT 296
Query 145 TCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------- 186
|||||.||||||||||||||||||||||||||||..||||||
Sbjct 297 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGACTGCCTCAGCCTCCCAAAGTGGTG 370
Query 187 -------------------------------------------------------------------------- 186
Sbjct 371 CTATTACAGGTGTGAGCCACCTCGCCTGACCTAAAAACACTTTTCAGCTCCAATTTTAAACTTAAAATTTTTCT 444
Query 187 -------------------------------------------------------------------------- 186
Sbjct 445 TATTTTAAAAACAACATATGCATGTATTATCAAATACAGGAAAATATGAAGAGACAGAAGTACTTACTGATCAT 518
Query 187 -------------------------------------------------------------------------- 186
Sbjct 519 AATCCTACCACCAGAGACATCACTATGAATATGTTTGTACATTTTTTTCCTGTGCATTCTAAAACATAGTTAAG 592
Query 187 -------------------------------------------------------------------------- 186
Sbjct 593 ATTATGCTAAATATACAGTTCTCATGCTCTTTTATGTCAGAAGTGTTTTCCCATGACATTTTAAACCCCATAGA 666
Query 187 -------------------------------------------------------------------------- 186
Sbjct 667 CATAATTTTCTAATGGCTACATACTATTCTATCTAACCATTTCCAGAGGTTGGATATTTATCCAGCTTCTGAGA 740
Query 187 -------------------------------------------------------------------------- 186
Sbjct 741 CTTCCTGTTATAAACAACACTTTGATGAACATCTTGGTACATAAATCTTTTGCATGTGACTACTTCCTTAGGAC 814
Query 187 -------------------------------------------------------------------------- 186
Sbjct 815 AGATTCCTAGAAGTGAAATTCTGGGTCAAAGAGTAGTAATATTTTAAAGGCTGTTTATGCATACTGACAAGCTG 888
Query 187 -------------------------------------------------------------------------- 186
Sbjct 889 CTTCCTGGCAATTTGTCCAAACTTTTACTCTGACTAGCATTGTATGGGAGCTTCCCTGAGTGAATGCTGCCTTT 962
Query 187 -------------------------------------------------------------------------- 186
Sbjct 963 GAAGTGGGGTCAGAGACTGAGGACCAAGGGGCACAGAGAAAGAAGAGTGTGGTCCTCGATGGGAGGACCCATCA 1036
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1037 CAAACCGTCTTGCACAGTGTAAACCCAGGAGAGGGGCTGAAGAAACCACTGCAGCCCGGGGCCGCCCATTCTAC 1110
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1111 CTGGCCCATGGTAGGCACTCAAGAAATGGTTTGCTACGTGAATAAACAAATCCACAAACATATATTTCTGAATT 1184
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1185 CCTATCATGCGTCAAACACAAGAGATAGGGAGAGAGGAGGAAAAGAAAAGCAAGGGATCATGGGATAAAAGGGG 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 ACAGTGGCAGTGGGGTGGACAGAAGTCAGAACTAAATTTACCTCATGCTTTAATTCGGCGAGTTTTCTTAGAAT 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 AGTCTGACCATTGCTTACGTTGAGGGTCTATAGTCCTCCCTTCCCCACAAGACAAAGTCCAACCTAATTCAGCA 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 CCAAGATCCAAGCAGCTCGGAAGATACAGGAGGGAAAAATCTGGTGTAGATTAAGTGCCACCCCCCAGCAATGG 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 CCAGGACACAGCAGCAATGTTACCTAAGAAAGCAACTGCGCCTCTTGCTGATCAGCTAGACATGAGGGCAGTGT 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 CCTACCTCAGCGGTTTGCAGCGGACATGCTGTCAGGCCATTGGGATAGTTCCCATAAGCCACTCCTGGTTGTCA 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 CCACTATTCCAAGTGGGCAGGAGCAGCCTTATTGACTGAGATGGGCGGCTATGGACACACATGGGTGTACGCAT 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 GTGATGGAAATGGGGGCTTGGGGCCCTGAGGGTCCACAGGGGCTGCGTGGTCAGGGAGGGTGGGCATGGCATCA 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 CAGGCACCCCAGGGGAGAAGCTGGCTTTCTTCCCATACTTTTGGCACTGTTTTCTGTTTTGTTTGCCTTCAAAG 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 AGCAAGTGATGGCTGGACAGCAAAGAGGAGTGGAGGCCGGGAGAATGGGCAGCTAGCCCAGCGCTCTCCAATAT 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CTGGGAGTCGACCGCACTCCTGCACTCCCTGTCATCCCTGCTAATGGTATTACCATTGCTCCAATCTTACAGAT 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 GAGGAAACTCAGGCATGGAGAGGTTGAGCGACTTGCCCAAATTCATGCAGTTAGGACCTGGCAGAGCTGCGCTT 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 TGAACCCAGGCTGCCTGGCTCTAGAGTGTGTGCACGAAACTTCACTGCCATATGAACAAAACTGCAGGACATAT 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 GTTCTCAAAGCAAATAAGCCTCCCAGAGAGGCTTTTCCTGATGGCTTCAAGGACCTGCCCTAGCCTGGTCTGAC 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 TTCCCAGAGGGGATCCAGTCCCAACATTGGCCCTATCTTTAGACCACATTTCCATCCCATTCTCAGTGAAAACC 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 CTGAGTCATGACAGAAGACAACCAATGCTGGAGAGAGGAGGTTTCAGGTAATGCCTGTTTTAGGCATCCTCTCC 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 TTTAAGAAAAATTTTTATATCAAGGCACCTCAACATAATAATACCTTTATTGCATATAGGTAGAATATAAAACT 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 GACTTGTAAGACCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTC 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 TAGCTAGCCTGCAGGGACGGGACTCAGTTCCTCAGCAGCCCAGTGCCTGGCACAACAGGCATTGAATTAGAAGT 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 GCCAGACATTTTCAAACTTTAAGGTATAATTTGTTTGGACACTTTGGCTGGGCATTTTGATAAAACATCCCTAG 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 TTAAAAGATGGCAACCAACAGGCATCAAACCAAAACCACCCTCAAAGAGCAAAATATAAGGCCTTTGTAACAAG 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 AGTCACAGAGTTATGGCTGGCCGCGGTGGCTCATGCCTGTAATCCTAGCACTTCGGGCCGTCTCTATTAAAAAC 2812
Query 187 ----- 186
Sbjct 2813 ACAAA 2817
