Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15487
Subject:
XR_002957596.1
Aligned Length:
3481
Identities:
161
Gaps:
3295

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTGCAGATGTAGACGGCTCCTGGGAAGCAAGAGTGCCTGATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCCCAGGGGACTCCAGACGGGCCTGTGACTGCCACACAAATCAAGTGCAGATGTCTCCCGCCATTTCTAACTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCTGCCCCTCACAGGGCAGGGAGCAAGTGGCAGCATCAGGGCAACGCCTTCTGGAAATGGCCCCTGAGCCCCGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACATGGCCACCCTCAAGGCCCCCACTGAGCAAGCGTTTCCTCTCTTCAAAGCTCCTGCAATCTGGGCTCCATG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTGAAATTCAAAAAGCCAGCTTGAAAAGACACGTGTTGGTGAGGATGTGTAGGAGGCAGACCCCTGACCCCTGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCACTGCCGCTAGGAATGTAAAATGGTGCAGCTCGGAAAACAATCGGTACTTCCTTAAAAAGTTAAACAAATCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CATGACTCAGCAGCCCCACTCCTAGGTAGATACCCAAGAGAAAGAACGTCCACCGTAGCACGTTTCATGACAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCGGGGGGAGACGGCCCAAAGGCCATCAACTGAGGAGTGGACGAATGAAGTGCGGCCCATCCTTACAGTGGGAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GATCGAATCTTAAAAGGGAAGGCAGTTCTGACACCTGCTCCAGCACGGATGAACCTCGAAAACACAATGCCAAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCAGGAAGCCTGTCACGAGACCACGTGCTGTCCGGCTGCACTTGCATGGAGCTCCCAGGACAGGAAGAGTCACA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGTAGGGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGCTGACTGCTCATGGGTAGGGTTTCCTTTTGGGGTGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGAACTGTTCTGGAATTGGATAGTGGTGACGGGCACAGAACTTTGTGCTTCTATTAAAAGCCACTGAATTTATT  888

Query    1  ------------------------------------------------------ATGCAGTGGCGCCATCTCAG  20
                                                                  .||||||||.||.|||||.|
Sbjct  889  TATTTTATTTTAATTTTTGAGAGACAAGAGACTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGG  962

Query   21  CTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTAC-AGG  93
            ||||||||||||||...|||||.||||||||.|||||||.||||||.||||.|||||||||||||||||| |||
Sbjct  963  CTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGATTACAAGG  1036

Query   94  CGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTC  167
            ||||.||.||.||.|.||.|||||||||||||||||||.||||||.||||||||||.||||||.|||||||.||
Sbjct 1037  CGTGCGCTACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTCACCATGTTGGTCAGGCTGCTC  1110

Query  168  TCGAACTCCTGACCTCAAG-------------------------------------------------------  186
            |||||||||||||.|||.|                                                       
Sbjct 1111  TCGAACTCCTGACTTCATGATCCGCCTGCCTCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGGTA  1184

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1185  CTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAATTACATCTCAATTTAAAAA  1258

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1259  ACAGGAAGGCTTAGGGGGACTGATTTGAGTAATAATAAAACTCCAGTTTCCTGCAAAACAAAAACAAAAAGACA  1332

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1333  AGGCCGGCGAGCTCTCTAAGCACTGACTATGCCAGGAAGGCTGCCCAGCCAGGACCCCGTGGCCCACGGGGCGT  1406

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1407  CGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATGCAGCCTGTTTG  1480

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1481  TGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAA  1554

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1555  AAATGGGTCAGGAACCCCCCGCCCCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCATCTGGCCCGCTTGAGGC  1628

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1629  CAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTCCCCACCAGTGTCCCCA  1702

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1703  GCAGTGACTGTGCCCCTAGTCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAG  1776

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1777  AGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGTTATGT  1850

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1851  AGGGGCTGCACAGTCATGGGGACATCGTGAAGCTGGCAGGAGGGTGGCTGTGGACAGCCCAGCGGTGGGCGGGG  1924

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1925  CCCCAGCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCT  1998

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1999  TTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCCCCAGGAAAGCACATCTGACCC  2072

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2073  CTAACCTTGCATGTGGTCACGGTGGCCGTGGGGCCCCCTCCCTTCCCCTGGCCCGCAAGGCTGGACTGTGCTGT  2146

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2147  CATCCCGCAGCAGTCACTGGGCTGGGCACAGCTGGGGGATTCAGGGAGGGTGTCCTAAGGCTTCTGTGTCCCTG  2220

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2221  GGTATCGGGGAGTGTGGGCTTCACTGAAAAGGCCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAG  2294

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2295  ATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGCTCGAG  2368

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2369  TCCCGCCTCCACCTCACAGCAGCTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCCAACTCCTGTCC  2442

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2443  TCCCGGCTTCTGGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAGGCACCTGACAAGAGGGTGC  2516

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2517  CCTCCCCTGGGCTGCAGGGACAAAAATGCCTGTGGCGTGAGCAGACCCCAGCTGGGCTCTCAGGAGACCCCTCA  2590

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2591  CCCTCCACCCGACACGGAGGCTCAGGAGACCCCTCACCCTCCACCCAGCACTGAAGCTCAGGCAGGCACAGCAC  2664

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2665  ACCCTGGGTCCTGGGGATGACGCTGACCTGAGGGTGGCAGAGGTGAGGTTCCCAGCCACACCGCTGCTGGCAGG  2738

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2739  TCAGGCCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGTCCAGGGCCTGGGGTCCGGCCCTGTGTGGGAAGTGAG  2812

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2813  CCTAGCAGATGTGCTCGGAGGTGCCACCGATGAAAAAATACTGCCACTCTGTTCACGTGGAGTTTAAGACAACG  2886

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2887  TGGGAATCGCATGTTGACACCAGGGAATTAGTTTAAAAGTTAAGGAGCTACTGAGAAACATCTCTCCTCCTCAC  2960

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2961  AGCTCACAGTTTAAAACTACGTGAACTTTTAACACCTGAGAGACCCAGGCAGGCATGCTCTGAACGCTTTAGTC  3034

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3035  CAATGCAGGGAACCCTCGTTTCACAGACAGAGCGTACAGGCTCACGGGGCCGCGCCAGGAGCATACCTGGCCTG  3108

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3109  GCGGCGGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCCTGCGTTGCTGGCTCTGTGGACTCTGGGCTTGGCAGC  3182

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3183  TGTGCGGAACGTGGGCCGGCATCGCTGTGCTCAGCCAGCGACCCCTGGGGGCCTAGCTCTGCTGAGGGCCGGCT  3256

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3257  GCCTGGTGGTGGGGTTCGTACCCTCCCACCCCTCCTGCTGTCAGCTGAGCCCAGCCTCACTTCCCCCTCCCTGT  3330

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3331  TCTGGAAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGGAGACGCAATGGTAGGAACAGCGCAAGAGGCGGCCAC  3404

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3405  TGCCCCACCTCAACGGAAAGCTGTCCCACACAAAGCAGGGGCCGCCCACCTGCCCAGACCCCACGGAAGGGGTG  3478

Query  187  ---  186
               
Sbjct 3479  GCC  3481

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