Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_002957596.1
- Aligned Length:
- 3481
- Identities:
- 161
- Gaps:
- 3295
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTGCAGATGTAGACGGCTCCTGGGAAGCAAGAGTGCCTGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCCAGGGGACTCCAGACGGGCCTGTGACTGCCACACAAATCAAGTGCAGATGTCTCCCGCCATTTCTAACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGCCCCTCACAGGGCAGGGAGCAAGTGGCAGCATCAGGGCAACGCCTTCTGGAAATGGCCCCTGAGCCCCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACATGGCCACCCTCAAGGCCCCCACTGAGCAAGCGTTTCCTCTCTTCAAAGCTCCTGCAATCTGGGCTCCATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGAAATTCAAAAAGCCAGCTTGAAAAGACACGTGTTGGTGAGGATGTGTAGGAGGCAGACCCCTGACCCCTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCACTGCCGCTAGGAATGTAAAATGGTGCAGCTCGGAAAACAATCGGTACTTCCTTAAAAAGTTAAACAAATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGACTCAGCAGCCCCACTCCTAGGTAGATACCCAAGAGAAAGAACGTCCACCGTAGCACGTTTCATGACAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGGGGGGAGACGGCCCAAAGGCCATCAACTGAGGAGTGGACGAATGAAGTGCGGCCCATCCTTACAGTGGGAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATCGAATCTTAAAAGGGAAGGCAGTTCTGACACCTGCTCCAGCACGGATGAACCTCGAAAACACAATGCCAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAGGAAGCCTGTCACGAGACCACGTGCTGTCCGGCTGCACTTGCATGGAGCTCCCAGGACAGGAAGAGTCACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGTAGGGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGCTGACTGCTCATGGGTAGGGTTTCCTTTTGGGGTGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAACTGTTCTGGAATTGGATAGTGGTGACGGGCACAGAACTTTGTGCTTCTATTAAAAGCCACTGAATTTATT 888
Query 1 ------------------------------------------------------ATGCAGTGGCGCCATCTCAG 20
.||||||||.||.|||||.|
Sbjct 889 TATTTTATTTTAATTTTTGAGAGACAAGAGACTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGG 962
Query 21 CTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTAC-AGG 93
||||||||||||||...|||||.||||||||.|||||||.||||||.||||.|||||||||||||||||| |||
Sbjct 963 CTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGATTACAAGG 1036
Query 94 CGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTC 167
||||.||.||.||.|.||.|||||||||||||||||||.||||||.||||||||||.||||||.|||||||.||
Sbjct 1037 CGTGCGCTACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTCACCATGTTGGTCAGGCTGCTC 1110
Query 168 TCGAACTCCTGACCTCAAG------------------------------------------------------- 186
|||||||||||||.|||.|
Sbjct 1111 TCGAACTCCTGACTTCATGATCCGCCTGCCTCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGGTA 1184
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1185 CTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAATTACATCTCAATTTAAAAA 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 ACAGGAAGGCTTAGGGGGACTGATTTGAGTAATAATAAAACTCCAGTTTCCTGCAAAACAAAAACAAAAAGACA 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 AGGCCGGCGAGCTCTCTAAGCACTGACTATGCCAGGAAGGCTGCCCAGCCAGGACCCCGTGGCCCACGGGGCGT 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 CGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATGCAGCCTGTTTG 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 TGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAA 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 AAATGGGTCAGGAACCCCCCGCCCCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCATCTGGCCCGCTTGAGGC 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 CAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTCCCCACCAGTGTCCCCA 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 GCAGTGACTGTGCCCCTAGTCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAG 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 AGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGTTATGT 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 AGGGGCTGCACAGTCATGGGGACATCGTGAAGCTGGCAGGAGGGTGGCTGTGGACAGCCCAGCGGTGGGCGGGG 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CCCCAGCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCT 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 TTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCCCCAGGAAAGCACATCTGACCC 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 CTAACCTTGCATGTGGTCACGGTGGCCGTGGGGCCCCCTCCCTTCCCCTGGCCCGCAAGGCTGGACTGTGCTGT 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 CATCCCGCAGCAGTCACTGGGCTGGGCACAGCTGGGGGATTCAGGGAGGGTGTCCTAAGGCTTCTGTGTCCCTG 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 GGTATCGGGGAGTGTGGGCTTCACTGAAAAGGCCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAG 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 ATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGCTCGAG 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 TCCCGCCTCCACCTCACAGCAGCTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCCAACTCCTGTCC 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 TCCCGGCTTCTGGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAGGCACCTGACAAGAGGGTGC 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 CCTCCCCTGGGCTGCAGGGACAAAAATGCCTGTGGCGTGAGCAGACCCCAGCTGGGCTCTCAGGAGACCCCTCA 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 CCCTCCACCCGACACGGAGGCTCAGGAGACCCCTCACCCTCCACCCAGCACTGAAGCTCAGGCAGGCACAGCAC 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 ACCCTGGGTCCTGGGGATGACGCTGACCTGAGGGTGGCAGAGGTGAGGTTCCCAGCCACACCGCTGCTGGCAGG 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 TCAGGCCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGTCCAGGGCCTGGGGTCCGGCCCTGTGTGGGAAGTGAG 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 CCTAGCAGATGTGCTCGGAGGTGCCACCGATGAAAAAATACTGCCACTCTGTTCACGTGGAGTTTAAGACAACG 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 TGGGAATCGCATGTTGACACCAGGGAATTAGTTTAAAAGTTAAGGAGCTACTGAGAAACATCTCTCCTCCTCAC 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 AGCTCACAGTTTAAAACTACGTGAACTTTTAACACCTGAGAGACCCAGGCAGGCATGCTCTGAACGCTTTAGTC 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 CAATGCAGGGAACCCTCGTTTCACAGACAGAGCGTACAGGCTCACGGGGCCGCGCCAGGAGCATACCTGGCCTG 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 GCGGCGGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCCTGCGTTGCTGGCTCTGTGGACTCTGGGCTTGGCAGC 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 TGTGCGGAACGTGGGCCGGCATCGCTGTGCTCAGCCAGCGACCCCTGGGGGCCTAGCTCTGCTGAGGGCCGGCT 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 GCCTGGTGGTGGGGTTCGTACCCTCCCACCCCTCCTGCTGTCAGCTGAGCCCAGCCTCACTTCCCCCTCCCTGT 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 TCTGGAAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGGAGACGCAATGGTAGGAACAGCGCAAGAGGCGGCCAC 3404
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3405 TGCCCCACCTCAACGGAAAGCTGTCCCACACAAAGCAGGGGCCGCCCACCTGCCCAGACCCCACGGAAGGGGTG 3478
Query 187 --- 186
Sbjct 3479 GCC 3481
