Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_002957597.1
- Aligned Length:
- 3550
- Identities:
- 161
- Gaps:
- 3364
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTGCAGATGTAGACGGCTCCTGGGAAGCAAGAGTGCCTGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCCAGGGGACTCCAGACGGGCCTGTGACTGCCACACAAATCAAGTGCAGATGTCTCCCGCCATTTCTAACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGCCCCTCACAGGTTCTTTGCCCCTCGCCTGGGGAGGGAGGAGGCTGGTGCTTTTTCTCACCCTCCCACTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGCCACCTCCGGGGCCAGGTGACCCCTCAGGAGGAATATGGGCTGGGTCTCCACTTCTGACACCCAGGCAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACTTCCCCTGTCCTGGGCCCTGGGCTGGAATGGCCACAGATGGGAGGCCTCTCCTGCTCCACCCTGCCCCTCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCCCCTGTGAACCTCCGTTCCCCACTGCAGGGCAGGGAGCAAGTGGCAGCATCAGGGCAACGCCTTCTGGAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGGCCCCTGAGCCCCGACACATGGCCACCCTCAAGGCCCCCACTGAGCAAGCGTTTCCTCTCTTCAAAGCTCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCAATCTGGGCTCCATGGTGAAATTCAAAAAGCCAGCTTGAAAAGACACGTGTTGGTGAGGATGTGTAGGAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGACCCCTGACCCCTGTGCACTGCCGCTAGGAATGTAAAATGGTGCAGCTCGGAAAACAATCGTGGGATGATCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATCTTAAAAGGGAAGGCAGTTCTGACACCTGCTCCAGCACGGATGAACCTCGAAAACACAATGCCAATGCAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCCTGTCACGAGACCACGTGCTGTCCGGCTGCACTTGCATGGAGCTCCCAGGACAGGAAGAGTCACAGGTAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGCTGACTGCTCATGGGTAGGGTTTCCTTTTGGGGTGAGGGAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTTCTGGAATTGGATAGTGGTGACGGGCACAGAACTTTGTGCTTCTATTAAAAGCCACTGAATTTATTTATTT 962
Query 1 -------------------------------------------------ATGCAGTGGCGCCATCTCAGCTCAC 25
.||||||||.||.|||||.||||||
Sbjct 963 TATTTTAATTTTTGAGAGACAAGAGACTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCAC 1036
Query 26 TGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTAC-AGGCGTGT 98
|||||||||...|||||.||||||||.|||||||.||||||.||||.|||||||||||||||||| |||||||.
Sbjct 1037 TGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGATTACAAGGCGTGC 1110
Query 99 GCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAA 172
||.||.||.|.||.|||||||||||||||||||.||||||.||||||||||.||||||.|||||||.|||||||
Sbjct 1111 GCTACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTCACCATGTTGGTCAGGCTGCTCTCGAA 1184
Query 173 CTCCTGACCTCAAG------------------------------------------------------------ 186
||||||||.|||.|
Sbjct 1185 CTCCTGACTTCATGATCCGCCTGCCTCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGGTACTGCG 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 CCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAATTACATCTCAATTTAAAAAACAGG 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 AAGGCTTAGGGGGACTGATTTGAGTAATAATAAAACTCCAGTTTCCTGCAAAACAAAAACAAAAAGACAAGGCC 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 GGCGAGCTCTCTAAGCACTGACTATGCCAGGAAGGCTGCCCAGCCAGGACCCCGTGGCCCACGGGGCGTCGTCC 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 TGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATGCAGCCTGTTTGTGAGT 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 GTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATG 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 GGTCAGGAACCCCCCGCCCCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCATCTGGCCCGCTTGAGGCCAGGA 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 ACGTATAAATACTGCCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTCCCCACCAGTGTCCCCAGCAGT 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 GACTGTGCCCCTAGTCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGG 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 CTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGGTGACGTTATGTAGGGG 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CTGCACAGTCATGGGGACATCGTGAAGCTGGCAGGAGGGTGGCTGTGGACAGCCCAGCGGTGGGCGGGGCCCCA 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 GCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCTTTCTT 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 TTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCCCCAGGAAAGCACATCTGACCCCTAAC 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 CTTGCATGTGGTCACGGTGGCCGTGGGGCCCCCTCCCTTCCCCTGGCCCGCAAGGCTGGACTGTGCTGTCATCC 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 CGCAGCAGTCACTGGGCTGGGCACAGCTGGGGGATTCAGGGAGGGTGTCCTAAGGCTTCTGTGTCCCTGGGTAT 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 CGGGGAGTGTGGGCTTCACTGAAAAGGCCAACGGGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAGATTTG 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 CACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGAGCACGCTCGAGTCCCG 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 CCTCCACCTCACAGCAGCTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCCAACTCCTGTCCTCCCG 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 GCTTCTGGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAGGCACCTGACAAGAGGGTGCCCTCC 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 CCTGGGCTGCAGGGACAAAAATGCCTGTGGCGTGAGCAGACCCCAGCTGGGCTCTCAGGAGACCCCTCACCCTC 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 CACCCGACACGGAGGCTCAGGAGACCCCTCACCCTCCACCCAGCACTGAAGCTCAGGCAGGCACAGCACACCCT 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 GGGTCCTGGGGATGACGCTGACCTGAGGGTGGCAGAGGTGAGGTTCCCAGCCACACCGCTGCTGGCAGGTCAGG 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 CCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGTCCAGGGCCTGGGGTCCGGCCCTGTGTGGGAAGTGAGCCTAG 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 CAGATGTGCTCGGAGGTGCCACCGATGAAAAAATACTGCCACTCTGTTCACGTGGAGTTTAAGACAACGTGGGA 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 ATCGCATGTTGACACCAGGGAATTAGTTTAAAAGTTAAGGAGCTACTGAGAAACATCTCTCCTCCTCACAGCTC 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 ACAGTTTAAAACTACGTGAACTTTTAACACCTGAGAGACCCAGGCAGGCATGCTCTGAACGCTTTAGTCCAATG 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 CAGGGAACCCTCGTTTCACAGACAGAGCGTACAGGCTCACGGGGCCGCGCCAGGAGCATACCTGGCCTGGCGGC 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 GGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCCTGCGTTGCTGGCTCTGTGGACTCTGGGCTTGGCAGCTGTGC 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 GGAACGTGGGCCGGCATCGCTGTGCTCAGCCAGCGACCCCTGGGGGCCTAGCTCTGCTGAGGGCCGGCTGCCTG 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 GTGGTGGGGTTCGTACCCTCCCACCCCTCCTGCTGTCAGCTGAGCCCAGCCTCACTTCCCCCTCCCTGTTCTGG 3404
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3405 AAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGGAGACGCAATGGTAGGAACAGCGCAAGAGGCGGCCACTGCCC 3478
Query 187 ------------------------------------------------------------------------ 186
Sbjct 3479 CACCTCAACGGAAAGCTGTCCCACACAAAGCAGGGGCCGCCCACCTGCCCAGACCCCACGGAAGGGGTGGCC 3550
