Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_002957598.1
- Aligned Length:
- 3369
- Identities:
- 161
- Gaps:
- 3183
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGCAGGCGCTTGTGCGGGAAGGCGTCTTCCGTGCAGATGTAGACGGCTCCTGGGAAGCAAGAGTGCCTGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCCAGGGGACTCCAGACGGGCCTGTGACTGCCACACAAATCAAGTGCAGATGTCTCCCGCCATTTCTAACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGCCCCTCACAGCTCCTGCAATCTGGGCTCCATGGTGAAATTCAAAAAGCCAGCTTGAAAAGACACGTGTTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGAGGATGTGTAGGAGGCAGACCCCTGACCCCTGTGCACTGCCGCTAGGAATGTAAAATGGTGCAGCTCGGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACAATCGGTACTTCCTTAAAAAGTTAAACAAATCACATGACTCAGCAGCCCCACTCCTAGGTAGATACCCAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGAAAGAACGTCCACCGTAGCACGTTTCATGACAGCCCGGGGGGAGACGGCCCAAAGGCCATCAACTGAGGAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGACGAATGAAGTGCGGCCCATCCTTACAGTGGGATGATCGAATCTTAAAAGGGAAGGCAGTTCTGACACCTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCAGCACGGATGAACCTCGAAAACACAATGCCAATGCAGGAAGCCTGTCACGAGACCACGTGCTGTCCGGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CACTTGCATGGAGCTCCCAGGACAGGAAGAGTCACAGGTAGGGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGACTGCTCATGGGTAGGGTTTCCTTTTGGGGTGAGGGAACTGTTCTGGAATTGGATAGTGGTGACGGGCACAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACTTTGTGCTTCTATTAAAAGCCACTGAATTTATTTATTTTATTTTAATTTTTGAGAGACAAGAGACTCACTC 814
Query 1 ----------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCT 58
.||||||||.||.|||||.|||||||||||||||...|||||.||||||||.||||||
Sbjct 815 TGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCT 888
Query 59 CGTGCCTCGGCCTCCTGAGTAGCTGGGATTAC-AGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAG 131
|.||||||.||||.|||||||||||||||||| |||||||.||.||.||.|.||.|||||||||||||||||||
Sbjct 889 CCTGCCTCAGCCTTCTGAGTAGCTGGGATTACAAGGCGTGCGCTACCACGCCCAGCTAATTTTTGTATTTTTAG 962
Query 132 GAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------- 186
.||||||.||||||||||.||||||.|||||||.|||||||||||||||.|||.|
Sbjct 963 TAGAGACTGGGTTTCACCATGTTGGTCAGGCTGCTCTCGAACTCCTGACTTCATGATCCGCCTGCCTCAGCCTC 1036
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1037 GGCCTCCCAAAGTGCTGGGATTACAGGCATGAGGTACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGA 1110
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1111 ATTTTATGGCATGTAAATTACATCTCAATTTAAAAAACAGGAAGGCTTAGGGGGACTGATTTGAGTAATAATAA 1184
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1185 AACTCCAGTTTCCTGCAAAACAAAAACAAAAAGACAAGGCCGGCGAGCTCTCTAAGCACTGACTATGCCAGGAA 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 GGCTGCCCAGCCAGGACCCCGTGGCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGA 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 GCCAGTGCCCCCACGCCGTGTCATGCAGCCTGTTTGTGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTG 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 CTTTGACAGAATTTCAAACGTAAAGAAGAGTTGCAAAAATGGGTCAGGAACCCCCCGCCCCATTCTGTGTCAGA 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 ACTAAGCTTCTGAGAAGCATCTGGCCCGCTTGAGGCCAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCC 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 TTTTGTGGCTGGTTCCCTTCCCCACCAGTGTCCCCAGCAGTGACTGTGCCCCTAGTCAGGAGCCACAGGAAGGT 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 CGGGGCCCTGGGCTTCCTCCGTCCTGTTGGCTGGAGAGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCG 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 GTCAAGCAGCGTGTTTTTGTTGGGGTGACGTTATGTAGGGGCTGCACAGTCATGGGGACATCGTGAAGCTGGCA 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 GGAGGGTGGCTGTGGACAGCCCAGCGGTGGGCGGGGCCCCAGCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCA 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 CGGGAGTCGGAATCACTTCAGAGCCCGCCTGCCGCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGA 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 AAGGAAGTCATTTCCCCAGGAAAGCACATCTGACCCCTAACCTTGCATGTGGTCACGGTGGCCGTGGGGCCCCC 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 TCCCTTCCCCTGGCCCGCAAGGCTGGACTGTGCTGTCATCCCGCAGCAGTCACTGGGCTGGGCACAGCTGGGGG 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 ATTCAGGGAGGGTGTCCTAAGGCTTCTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAAAAGGCCAACG 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 GGGTGGAAGCTGAGGGGGAGTCATTGCACAAATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATG 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 AGGGCGGCTCCCGTCCCGTTCCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTGCGGTAA 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 GCGGGAGACTCCCATTTTCAAGGCCAACTCCTGTCCTCCCGGCTTCTGGCTGTCTCCAGGCTCATCCCCAAGAC 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 CAGCCGCAGGGACTCAGGCACCTGACAAGAGGGTGCCCTCCCCTGGGCTGCAGGGACAAAAATGCCTGTGGCGT 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 GAGCAGACCCCAGCTGGGCTCTCAGGAGACCCCTCACCCTCCACCCGACACGGAGGCTCAGGAGACCCCTCACC 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 CTCCACCCAGCACTGAAGCTCAGGCAGGCACAGCACACCCTGGGTCCTGGGGATGACGCTGACCTGAGGGTGGC 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 AGAGGTGAGGTTCCCAGCCACACCGCTGCTGGCAGGTCAGGCCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGT 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 CCAGGGCCTGGGGTCCGGCCCTGTGTGGGAAGTGAGCCTAGCAGATGTGCTCGGAGGTGCCACCGATGAAAAAA 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 TACTGCCACTCTGTTCACGTGGAGTTTAAGACAACGTGGGAATCGCATGTTGACACCAGGGAATTAGTTTAAAA 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 GTTAAGGAGCTACTGAGAAACATCTCTCCTCCTCACAGCTCACAGTTTAAAACTACGTGAACTTTTAACACCTG 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 AGAGACCCAGGCAGGCATGCTCTGAACGCTTTAGTCCAATGCAGGGAACCCTCGTTTCACAGACAGAGCGTACA 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 GGCTCACGGGGCCGCGCCAGGAGCATACCTGGCCTGGCGGCGGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCC 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 TGCGTTGCTGGCTCTGTGGACTCTGGGCTTGGCAGCTGTGCGGAACGTGGGCCGGCATCGCTGTGCTCAGCCAG 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 CGACCCCTGGGGGCCTAGCTCTGCTGAGGGCCGGCTGCCTGGTGGTGGGGTTCGTACCCTCCCACCCCTCCTGC 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 TGTCAGCTGAGCCCAGCCTCACTTCCCCCTCCCTGTTCTGGAAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGG 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 AGACGCAATGGTAGGAACAGCGCAAGAGGCGGCCACTGCCCCACCTCAACGGAAAGCTGTCCCACACAAAGCAG 3330
Query 187 --------------------------------------- 186
Sbjct 3331 GGGCCGCCCACCTGCCCAGACCCCACGGAAGGGGTGGCC 3369
