Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- XR_002957600.1
- Aligned Length:
- 3270
- Identities:
- 161
- Gaps:
- 3084
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGAGCTGAGATTGCACCACTGTACTCCAGCCTGGGCGACAGAGCGAGACTGTCTTAAAAAAAAAAAAGAGAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGGGGAAGGCCCACCCAGGAGCTGCTCTGCCAGGCCACAGCCATGTCTAGGGTGGGCTGGACATGGCAGCCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCCCTGCACAGGGTGGAATTTCCTTACTTGCCTTTGGTCAGGGGTTTACTCCCAAACGTCCCATCTTTTCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCGTCTTTTCTACTTCATCACTTCTCCCTCCCAGGATGATGTCTATAAACTAAGCACTGACAGCTCACAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCTGCCCCAGCTGCAGGGATGGGTCCCAGCCTCTCTTGCCTGCTTCTTGGCTACAGGACGGACTCCACTGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCCGTGGGATGATCGAATCTTAAAAGGGAAGGCAGTTCTGACACCTGCTCCAGCACGGATGAACCTCGAAAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACAATGCCAATGCAGGAAGCCTGTCACGAGACCACGTGCTGTCCGGCTGCACTTGCATGGAGCTCCCAGGACAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGAGTCACAGGTAGGGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGCTGACTGCTCATGGGTAGGGTTTCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGGGGTGAGGGAACTGTTCTGGAATTGGATAGTGGTGACGGGCACAGAACTTTGTGCTTCTATTAAAAGCCA 666
Query 1 -----------------------------------------------------------------ATGCAGTGG 9
.||||||||
Sbjct 667 CTGAATTTATTTATTTTATTTTAATTTTTGAGAGACAAGAGACTCACTCTGTCGCCCAGGCTGGAGTGCAGTGG 740
Query 10 CGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTG 83
.||.|||||.|||||||||||||||...|||||.||||||||.|||||||.||||||.||||.|||||||||||
Sbjct 741 TGCGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTGAGTAGCTG 814
Query 84 GGATTAC-AGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGG 156
||||||| |||||||.||.||.||.|.||.|||||||||||||||||||.||||||.||||||||||.||||||
Sbjct 815 GGATTACAAGGCGTGCGCTACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTCACCATGTTGG 888
Query 157 CCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------------------- 186
.|||||||.|||||||||||||||.|||.|
Sbjct 889 TCAGGCTGCTCTCGAACTCCTGACTTCATGATCCGCCTGCCTCAGCCTCGGCCTCCCAAAGTGCTGGGATTACA 962
Query 187 -------------------------------------------------------------------------- 186
Sbjct 963 GGCATGAGGTACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAATTACATCT 1036
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1037 CAATTTAAAAAACAGGAAGGCTTAGGGGGACTGATTTGAGTAATAATAAAACTCCAGTTTCCTGCAAAACAAAA 1110
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1111 ACAAAAAGACAAGGCCGGCGAGCTCTCTAAGCACTGACTATGCCAGGAAGGCTGCCCAGCCAGGACCCCGTGGC 1184
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1185 CCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTGTCATG 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 CAGCCTGTTTGTGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTGACAGAATTTCAAACGTAAAG 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 AAGAGTTGCAAAAATGGGTCAGGAACCCCCCGCCCCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCATCTGGC 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 CCGCTTGAGGCCAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTCCCCAC 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 CAGTGTCCCCAGCAGTGACTGTGCCCCTAGTCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCCGTCCT 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 GTTGGCTGGAGAGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGTTGGGG 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 TGACGTTATGTAGGGGCTGCACAGTCATGGGGACATCGTGAAGCTGGCAGGAGGGTGGCTGTGGACAGCCCAGC 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 GGTGGGCGGGGCCCCAGCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCAGAGCC 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 CGCCTGCCGCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCCCCAGGAAAGC 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 ACATCTGACCCCTAACCTTGCATGTGGTCACGGTGGCCGTGGGGCCCCCTCCCTTCCCCTGGCCCGCAAGGCTG 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 GACTGTGCTGTCATCCCGCAGCAGTCACTGGGCTGGGCACAGCTGGGGGATTCAGGGAGGGTGTCCTAAGGCTT 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 CTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAAAAGGCCAACGGGGTGGAAGCTGAGGGGGAGTCATT 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 GCACAAATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCCGTCCCGTTCCTGA 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 GCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCAAGGCC 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 AACTCCTGTCCTCCCGGCTTCTGGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAGGCACCTGA 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 CAAGAGGGTGCCCTCCCCTGGGCTGCAGGGACAAAAATGCCTGTGGCGTGAGCAGACCCCAGCTGGGCTCTCAG 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 GAGACCCCTCACCCTCCACCCGACACGGAGGCTCAGGAGACCCCTCACCCTCCACCCAGCACTGAAGCTCAGGC 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 AGGCACAGCACACCCTGGGTCCTGGGGATGACGCTGACCTGAGGGTGGCAGAGGTGAGGTTCCCAGCCACACCG 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 CTGCTGGCAGGTCAGGCCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGTCCAGGGCCTGGGGTCCGGCCCTGTG 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 TGGGAAGTGAGCCTAGCAGATGTGCTCGGAGGTGCCACCGATGAAAAAATACTGCCACTCTGTTCACGTGGAGT 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 TTAAGACAACGTGGGAATCGCATGTTGACACCAGGGAATTAGTTTAAAAGTTAAGGAGCTACTGAGAAACATCT 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 CTCCTCCTCACAGCTCACAGTTTAAAACTACGTGAACTTTTAACACCTGAGAGACCCAGGCAGGCATGCTCTGA 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 ACGCTTTAGTCCAATGCAGGGAACCCTCGTTTCACAGACAGAGCGTACAGGCTCACGGGGCCGCGCCAGGAGCA 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 TACCTGGCCTGGCGGCGGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCCTGCGTTGCTGGCTCTGTGGACTCTG 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 GGCTTGGCAGCTGTGCGGAACGTGGGCCGGCATCGCTGTGCTCAGCCAGCGACCCCTGGGGGCCTAGCTCTGCT 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 GAGGGCCGGCTGCCTGGTGGTGGGGTTCGTACCCTCCCACCCCTCCTGCTGTCAGCTGAGCCCAGCCTCACTTC 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 CCCCTCCCTGTTCTGGAAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGGAGACGCAATGGTAGGAACAGCGCAA 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 GAGGCGGCCACTGCCCCACCTCAACGGAAAGCTGTCCCACACAAAGCAGGGGCCGCCCACCTGCCCAGACCCCA 3256
Query 187 -------------- 186
Sbjct 3257 CGGAAGGGGTGGCC 3270
