Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15487
Subject:
XR_002959365.1
Aligned Length:
2930
Identities:
160
Gaps:
2747

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACACTGCACGCAGGCTGGGCCGACTGGGGAGCTCATAGGCCAGGCTCTGACACCCAGGCAGGGCCTAGGGTGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACGATGGCAGGTGGGGGCAGCGACCTGAGCACCAGGGGGCTGAACGGAGGTGTTTCACAAGTAGCAAATGAGAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAACCATCTTCCTGCACACAGCCAAAGTCTGCAAAGGCTGTTCACGGAAGACCAGGATGTAGATGAGGGACTTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCTATGACACTGTATTCAAGCACTTCAAAAGACATAAGCTGGAGATATCAAATGCAATAAAAAAGACATTTCCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTCCTTGAGGGCCTCCGCGATCGGGAACTCATCACAAATAAAATGTTTGAAGATTCTGAAGATTCTTGTAGAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCTGGTCCCTGTACAAAGAGTGGTGTACAATGTTCTCAGTGAACTGGAGAAGACATTTAACCTGTCAGTTTTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGCACTGTTCAGCGAGGTCAACATGCAGGAATACCCCGATTTAATTCACATTTATAAAAGCTTCAAAAATGCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATCCAAGACAAATTGTCTTTCCAAGAAAGTGATCGAAAAGAAAGGGAAGAGAGGCCTGACATCAAACTAAGTCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAAACAAGAGCGACCAGCATGTGAAAATGAGAAGTGTTCCTATGTCATGTGTTTCTCAGGAGAAGTGCCAGAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCCCGGAAGCAAGGAAGGAAAGTGACCAAGCATGTGGCAAAATGGATACTGTGGATATTGCAAACAACTCTACT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTGGGAAAACCCAAGAGGAAAAGAAGAAAAAAGAAGGGGCATGGCTGGAGCAGAATGGGAACGAGAACGCAGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAACAACCAACAAAATGATAACAGCAAAGCCGATGGCCAGCTGGTCTCGAGTGAAAAGAAGGCGAACATGAATC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGAAAGACCTTTCCAAGATTAGGGGGAGAAAGAGAGGCAAACCTGGAACCCACTTTACTCAGAGTGACAGAGCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCACAGAAAAGAGTCCGATCAAGAGCTTCAAGAAAGCACAAAGATGAAACTGTGGATTTTCAGGCTCCTTTACT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCCAGTGACCTGTGGTGGGGTGAAGGGAATTTTACATAAGGAGAAATTGGAACAAGGAACCTTGGCAAAGTGTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TACAGACTGAGGATGGAAAATGGTTCACCCCCATGGAATTTGAAATCAAAGGAGGCTACGCAAGATCAAAGAAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGGAGGCTGAGTGTGCGCTGTGGCGGGTGGCCCCTACGACGGCTGATGGAGGAAGGATCTCTACCTAATCCTCC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAGAATATATTACAGGAACAAAAAGAGAATACTGAAGTCTCAAAACAATAGCTCAGTTGACCCTTGTATGAGAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACTTGGATGAGTGTGAGGTGTGCCGGGACGGAGGGGAGCTGTTCTGTTGCGACACTTGTTCAAGAGTCTTCCAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAGGACTGCCACATCCCACCTGTGGAAAGTGAGAAGACCCCGTGGAATTGCATCTTCTGCAGGATGAAGGAGTC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCCGGGAAGCCAACAGTGTTGTCAGGAATCTGAGGTCCTGGAGAGGCAGATGTGTCCTGAGGAACAGTTGAAAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTGAGTTCCTCCTCTTGAAAGTCTATTGCTGTTCTGAGAGCTCCTTTTTTGCCAAGATTCCATACTATTATTAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GTAAGTAACAACAGCAACCCATGATTACAGGCTGCCATGACATTACCTGACCCTGAAATGGGCCCTCGTGAGAT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTGTGATCTTAATCCCACGGGGCAAGAGCACACGCTGTCATTAGTTGCCTTCACCTTGTTGTATTTCTGCTGGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTTTATGGGAATCCACAGAAGGTAGACACTGAACTATGCTGGTAGCTTTTCCATTGGTATATTTGTCACCAGAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TAGAGAGGCGTGTCAAGGCCTGAAGGAGCCCATGTGGTTGGATAAAATCAAGAAAAGGCTGAATGAGCACGGTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ACCCCCAAGTGGAGGGGTTTGTACAAGACATGCGCCTCATCTTCCAGAACCACAGGGCCTCTTACAAGTATAAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GATTTTGGCCAAATGGGACTTAGACTGGAGGCTGAATTTGAGAAGGATTTCAAGGAAGTGTTTGCTATTCAGGA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AACAAATGGGAACAGTTGACTGGTTTAGTGGATGCTGAAGGCCTTCAGGAAATATGCTACTGGTTGCCACTGAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTCAAACTGAGAGCACTTGGGAAATAGCACATGCAGGGAGAGGCTTTTCTCTGAGCCTCCCTCATCTGCCCAAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AACAAATCCTCAAAAGAAATTTGATCATCATGAATCCCATCCCCAAGAATCTCATCAACCAGGGAAGAGGAACT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GAGATCACAGGGAAGGAGATTGGAGGTGATACCAGCACAGACAGACTCTCACCTCTTCTCCTGAGGTCTGCTCC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AGACAACATTTATTACTCACAAGACCTTTTTCCTCCGTTTTTTTTTTGAGATGGAGTCTCACACAGTCACCCGG  2442

Query    1  -------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCG  67
                   |||||.||||||.|||||||||||||||||||||...|||||.|.||||||.|||||||.||.|||.
Sbjct 2443  GATTGGAATGCAATGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCCCGGATTCAAGTGATTCTCCTGTCTCA  2516

Query   68  GCCTCCTGAGTAGCTGGGATTACAGGCGTG--TGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGAGAC  138
            ||||||..||||||||||||||||   |||  ||||||.|..|.||.|||| ||||||.||||||||.||||||
Sbjct 2517  GCCTCCCAAGTAGCTGGGATTACA---GTGCCTGCCACCATGCCCAGCTAATTTTTTGCATTTTTAGTAGAGAC  2587

Query  139  GGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------  186
            ||||||||||..||||||||||||||||||||||||||||||||||.|                          
Sbjct 2588  GGGGTTTCACTATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGAGCCGCCCGCCTTGGCCTCCCAAAGT  2661

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2662  GCTGGGACGTGACAGGAGTGAGCCACCACACCTGGCCACTCGCAAGACCTTTTATCTGAAAACCAGCCAAGCTT  2735

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2736  TATTCACGACACACTTCTTCCCTTCACTCTCCCACTTCTGTGGTCAACTCCCTGCAGAACTCCCAAACTGCCGT  2809

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2810  TCTTTTCGATAGCTCACGATGGTGTATGAGTGTCAATCATCTGACCCTTCTTGGAGTCTCATATTTCGTGGAAC  2883

Query  187  --------------------------------------------  186
                                                        
Sbjct 2884  TCCTGTGCAAACATATATTATTAAATTTTTTTTCCTCCTGTCAA  2927

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