Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15487
Subject:
XR_938573.3
Aligned Length:
2799
Identities:
163
Gaps:
2615

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGGAGGTCCGGGGCGCCGGACCCGCCGCGGCCTCGCCGGGCCTGGCTGGCCTGTTTGTTCTATACTTCTAATGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTAATAATTACCCAGAGCTTTGGATATATGCAATTCTGCAAAATAAATCAAAAGGAGTCAGAAGGCAATTTTAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTCCTAATAGACCCTTAGTTAGAATTTAACTTAAAAGCCATTTTTAACAAATGTAAACAATATCTCCCCTCCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCATCAAAGTCTGACGGAGACAAATGAAAAGATTTTTTAGAAGAATAGGACTATATCAAGACCAAAAAAAAAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAAAAAGCTAAGAAAGGGTACCATCAACAATCTTTACAGAACTTCTGGAAAGTAAAAAGCAAATGGTACTGGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGGGAATAACCAAAGAAAATGAAACCTCAGCCCCGGATGGCAAAGGACACAACTGGAGAAACTAGTTATTTCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAAGGCTTTGACTGGAATGGCATGCTTCTTTAAAGAATCAAAGTTGACTTGTAGAGCCAATAAAAGCCCCTTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGAAATGTGGCCTCATACCTTGTCTATGCCATCTCTGTACAAGATTCCCGACTTGTGACATCCTGAGACATAAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTGAAAAGGACCTAGAAGGAACTACTGGAAGAAATATCACCCCTATTAAACTGGGCAATTTTGTTTAAATATGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTGTTCTGGAGGAAACATGCATTGTCACCAGGCTGGATGGGACCCTTTCAAGTGCCACGATCACTCATATGGGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATCAGAGTGAAAGAAAAACCAGATGGTTTCATGCTTTCCATGTGAAGCCAGCTCCTCAGGAGGACTAGACTGCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GTTTCCACAAAGGATTTGAAGTTTAATTTCCTAGAGTGACTAATATTGGTAATGAACTCAACTGAAAGGAGGTA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCTAAGGAATGTATTATTCTGACTACCTTGCTGTCCTAGTTGCAATAGTGTTTTGTTCAATTACTATAAGAAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CACATTTTATTAGAAAATAAACATGTTATTTGTTACACCACTTTTTCTTTCTGTACTCCCAATAATGGTTCCTA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAGTCACATTTCCTCTCTCCTCTGAATTGTATTCCCAGTACAGAAATGCTGGGCCTGCATTTATGAATCCAACA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTCTGATTATTGGCCAAATAAACACAAGACCATGTTCATTACTATGTTTTAATATCAAAGTAAAAGTAACTACT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ATGCATCCAGAAACCAAAGCCCTAAATTTCACACAAAAAAATTTGTTAACTGGTTTGATTGGAAGTATAGTATA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GAAAAGAAATGCATCTAATTAAGTGTCTGGCATTTATGGATAGAGACCTCAGAAGACAGCTCTAATGTCAATCG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATTAACTTGAGAATAGAAGTTTTCTCCAGTCCTACTATGGATAGATAAACAAAGGTGGATATGCCTGTTATCTA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGTTATTTAGTTAACTGTTATAATAATATAACTACTGGTTTGGACCGAGGTAAGAAATGGCCCAAAAGTTGGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTTGTCCTCCAGACTTAAAACTATTAGAGCCATGTACACTAAACACTGGAAATTCAATCTGTGCCCTTCAACGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTACTTCATAATAAGACTTTGATACTATATAATGGCCACGAGTGTCTTTGCATTTTGCATCTGGGAGAAATTAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTGGGAAGATGGGATAATTACCAAAAGGCCTAGTTTATCCTATAAATGCAATATTACTCCTGTGACTGCTGAGA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACTCAGAGGAAATTCATTGGGCCTTACAAGAAAAACTCAGTTAAAAAACATATATTATCAGGCTCCAGAGTTAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GCTATTAACTCGGCTAGGATAGGGATTTCTTTCTTTTTTGTTTGTTTGTTTGTTTTCTGAAGATGGATTCTCAC  1850

Query    1  ------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATT  56
                              .||||||||.||.||||||||||||||||||||||..||||..||||||||.||||
Sbjct 1851  TCAATAGCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATT  1924

Query   57  CTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAA--CTAATTTTTGTATTTT  128
            |||.|||||||||||||||||||||||||||||.||||.|||.||||  |||.|.|  .|||||||||||||||
Sbjct 1925  CTCCTGCCTCGGCCTCCTGAGTAGCTGGGATTATAGGCATGTTCCAC--CACGCCAGGTTAATTTTTGTATTTT  1996

Query  129  TAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------  186
            |||.||||||.||||||||||.||||||.||||||||||||.||||||||||||||.|                
Sbjct 1997  TAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCATGATCCGCTGGCCTCAGC  2070

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2071  TTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGCCAGATTTCATTTTCTAAAACTACAAAATAA  2144

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2145  TACTCAAGTAGTTAATCATTTGAAAGCAGAAACAAAGACATGACAACAGTTTATAAAATTAATGTATCATGAGG  2218

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2219  ATAATTTTTGTGTATGGCTAATCAAATATCTGCTTTAACCATTCACAACTGGTATATTTAAAGATTCCCCCAAG  2292

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2293  AAAAATATTGTACTAATTTTTGATTCATCCCATTATAATTCTGATAATTGCTTTATTTTGTATTTTACCATGGA  2366

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2367  CTTGCTGGATATAAATATCTAAAGACTGCTGCAAACTGCCCAGAGAAAGGTTAAAATGTCAGAGTAAACAATTG  2440

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2441  GAAAACTGTAGTTTTAGTAGAAAATAGTAACAAGGAAAATTGTAAGGGTAAATACAAATCTAAAAATGAATTTT  2514

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2515  AATTTAAAATTTTCCTCAGTGCAAAAAGGAAAGAACTATTCCCCCTCCCTTTTCTTTCAGCATTTCCTTCAGAA  2588

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2589  AATGGAATTATAAATAAACTTCTTGCCAGTTTTGCATCCTAGGAATGTCATTCTTTTTTTTTCTTTTATTATTA  2662

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2663  TACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCACGCTGGTGCG  2736

Query  187  -------------------------------------------------------------  186
                                                                         
Sbjct 2737  CTGCACCCACTAACTCGTCATCTAGCATTAGGTATATTTCCCAATGCTATCCCTCCCCCCT  2797

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