Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15494
Subject:
NM_001271068.1
Aligned Length:
484
Identities:
208
Gaps:
254

Alignment

Query   1  ATGAGCGATAACGATGACATCGAGGTGGAGAGCGACGCTGACAAACGGGCTCATCATAATGCACTGGAACGAAA  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGAGCGATAACGATGACATCGAGGTGGAGAGCGACGCTGACAAACGGGCTCATCATAATGCACTGGAACGAAA  74

Query  75  ACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAG----  144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  75  ACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAGCTCT  148

Query 145  ---------------------GCATCCCGGGCCCAAATCCTAGACAAAGCCACAGAATAT-ATCCAGTATATGC  196
                                |.|..||.|.||   .||.|.|.|||||        |.| ||.||| |.||||
Sbjct 149  ATTTCCTCTTTTGGAAATTGTGTACTCCTGTCC---TTCATCGTCAAAG--------TTTGATGCAG-AAATGC  210

Query 197  GAAGGAAAAACCACACACACCAGCAAGATATTGACGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAGCAAGTC  270
                          ||||||..|     |||       ||||||                    .|.|||   
Sbjct 211  ---------------CACACCTTC-----ATT-------TCAAGC--------------------TACCAA---  234

Query 271  CGTGCACTGG-----AGAAGGCGAGGTCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAACAGCCTC  339
            ||||||..|     ||||.||.||.|.                                              
Sbjct 235  -GTGCACAAGAAAAAAGAATGCAAGATT----------------------------------------------  261

Query 340  TACACCAACGCCAAGGGCAGCACCATCTCTGCCTTCGATGGGTGCTCGGACTCCAGCTCGGAGTCTGAGCCTGA  413
                                                                                     
Sbjct 262  --------------------------------------------------------------------------  261

Query 414  AGAGCCCCAAAGCAGGAAGAAGCTCCGGATGGAGGCCAGC  453
                                                   
Sbjct 262  ----------------------------------------  261