Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15512
• Subject: NM_001252260.1
• Aligned Length: 846
• Identities: 583
• Gaps: 213

Alignment

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct   1  ATGGAAGACTCGATGGATATGGACATGAGTCCTCTTAGGCCTCAGAACTACCTTTTCGTGGATAATGATGAAAA  74

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct  75  TGAGCACCAGTTGTCATTAAGAACGGTCAGTTTAGGAGCAGGGGCAAAAGATGAGTTACACATCGTAGAGGCAG  148

Query   1  -----------------------------------------------------ATGTCTGTACAGCCAACGGTT  21
                                                                |||||||||||.|||||.|||
Sbjct 149  AAGCAATGAACTATGAAGGCAGTCCAATTAAAGTAACACTGGCAACTTTGAAAATGTCTGTACAACCAACAGTT  222

Query  22  TCCCTTGGGGGCTTTGAAATAACACCACCAGTGGTCTTAAGGTTGAAGTGTGGTTCAGGGCCAGTGCATATTAG  95
           |||||.||||||||||||||.||||||||.|||||||||.||||||||||||||||||||||.|||||.|||||
Sbjct 223  TCCCTAGGGGGCTTTGAAATTACACCACCTGTGGTCTTACGGTTGAAGTGTGGTTCAGGGCCTGTGCACATTAG  296

Query  96  TGGACAGCACTTAGTAGCTGTGGAGGAAGATGCAGAGTCAGAAGATGAAGAGGAGGAGGATGTGAAACTCTTAA  169
           |||||||||..||||||||||.|||||||||||||||||.|||||||||||.||||||||.||.|||||||||.
Sbjct 297  TGGACAGCATCTAGTAGCTGTAGAGGAAGATGCAGAGTCTGAAGATGAAGATGAGGAGGACGTAAAACTCTTAG  370

Query 170  GTATATCTGGAAAGCGGTCTGCCCCTGGAGGTGGTAGCAAGGTTCCACAGAAAAAAGTAAAACTTGCTGCTGAT  243
           |.||.|||||||||||.|||||.|||||||||||||.|||||||||||||||||||||||||||      ||||
Sbjct 371  GCATGTCTGGAAAGCGATCTGCTCCTGGAGGTGGTAACAAGGTTCCACAGAAAAAAGTAAAACT------TGAT  438

Query 244  GAAGATGAT---GACGATGATGATGAAGAGGATGATGATGAAGATGATGATGATGATGATTTTGATGATGAGGA  314
           |||||||||   |||||||||||.||.||.||.||||||||.||||||||||||||||||||||||||.|||||
Sbjct 439  GAAGATGATGAGGACGATGATGAGGACGATGAGGATGATGAGGATGATGATGATGATGATTTTGATGAAGAGGA  512

Query 315  AGCTGAAGAAAAAGCGCCAGTGAAGAAATCTATACGAGATACTCCAGCCAAAAATGCACAAAAGTCAAATCAGA  388
           |.||||||||||.|..|||||||||||||||.||||||||||.||||||||||||||||||||.|||||.||.|
Sbjct 513  AACTGAAGAAAAGGTCCCAGTGAAGAAATCTGTACGAGATACCCCAGCCAAAAATGCACAAAAATCAAACCAAA  586

Query 389  ATGGAAAAGACTCAAAACCATCATCAACACCAAGATCAAAAGGACAAGAATCCTTCAAGAAACAGGAAAAAACT  462
           ||||||||||||.|||||   ||||||||||.||||||||.||.|||||.||||||||.|||||||||||.|||
Sbjct 587  ATGGAAAAGACTTAAAAC---CATCAACACCGAGATCAAAGGGTCAAGAGTCCTTCAAAAAACAGGAAAAGACT  657

Query 463  CCTAAAACACCAAAAGGACCTAGTTCTGTAGAAGACATTAAAGCAAAAATGCAAGCAAGTATAGAAAAAGGTGG  536
           |||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||
Sbjct 658  CCTAAAACACCAAAAGGACCTAGTTCTGTAGAAGACATTAAGGCAAAAATGCAAGCAAGTATAGAAAAAGGCGG  731

Query 537  TTCTCTTCCCAAAGTGGAAGCCAAATTCATCAATTATGTGAAGAATTGCTTCCGGATGACTGACCAAGAGGCTA  610
           ||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 732  TTCTCTTCCCAAAGTGGAAGCCAAGTTCATTAATTATGTGAAGAATTGTTTCCGGATGACTGACCAGGAGGCTA  805

Query 611  TTCAAGATCTCTGGCAGTGGAGGAAGTCTCTT  642
           |||||||||||||||||||||||||.||||||
Sbjct 806  TTCAAGATCTCTGGCAGTGGAGGAAATCTCTT  837