Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15515
- Subject:
- XM_006514585.2
- Aligned Length:
- 3075
- Identities:
- 1162
- Gaps:
- 1800
Alignment
Query 1 ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA 74
||||||||||||||||||||||||||||||||.|||||||||||.||.||||||||||||||||||||||||||
Sbjct 1 ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTAAGGCCATTGACAGCCTCCCAGACTGTTAAGACATTTTCACA 74
Query 75 AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC 148
|||||.||||||||||..||||||.||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct 75 AAACAAACCAGCAGCAATTAGGACGTTTCAACAGATTCGGTGCTATTCTGCACCTGTAGCTGCTGAACCATTTC 148
Query 149 TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG 222
|.|||||||||||||||||||||||||||||.|||||||||||.|||.||||.||.||||||||||||||||||
Sbjct 149 TTAGTGGGACTAGTTCGAACTATGTGGAGGAAATGTACTGTGCCTGGTTGGAGAATCCCAAAAGTGTACATAAG 222
Query 223 TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT 296
|||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||.||||||.||||
Sbjct 223 TCATGGGACATTTTTTTCCGAAACACCAATGCTGGAGCCCCACCGGGCACTGCCTACCAGAGCCCCCTTTCCCT 296
Query 297 GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG 370
|||.|||.|||||||||||.|..||||||||||||||||||||||.||||||||.||.|||||.|||||.||||
Sbjct 297 GAGTCGAAGCTCCCTGGCTACCATGGCCCATGCACAGTCCCTGGTGGAAGCACAACCTAACGTCGACAAACTCG 370
Query 371 TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC 444
|||||||||||.||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGGAGGACCACTTGGCGGTGCAGTCTCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC 444
Query 445 CCCCTGGGGATTTTGGATGCTGATCTGGACTCCTCCGTGCCCGCTGACATTATCTCATCCACAGACAAACTTGG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCCTGGGGATTTTGGATGCTGATCTGGACTCCTCCGTGCCCGCTGACATTATCTCATCCACAGACAAACTTGG 518
Query 519 GTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCACTTTCATCGGGGGACAGG 592
||||||||||||..|.|||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 519 GTTCTATGGCCTACACGAGTCTGACCTTGACAAGGTCTTCCACTTACCCACCACCACTTTCATCGGGGGACAGG 592
Query 593 AATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCATATTGGGGTGGAGTTC 666
|..|||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||
Sbjct 593 AGCCAGCACTTCCTCTTCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCACATTGGTGTGGAGTTC 666
Query 667 ATGTTCATCAATGACCTGGAGCAGTGCCAGTGGATCCGGCAGAAGTTTGAGACCCCTGGGATCATGCAGTTCAC 740
||||||||.|||||..||||.||.||||||||||||||.||||||||||||||||||||.||||||||||||||
Sbjct 667 ATGTTCATTAATGATTTGGAACAATGCCAGTGGATCCGACAGAAGTTTGAGACCCCTGGAATCATGCAGTTCAC 740
Query 741 AAATGAGGAGAAACGGACCCTGCTGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCCTACAGCGGAAGT 814
.|||||||||||.||||||.||||||||||||||||.||.|||||||||||||||||||||||||||||.||||
Sbjct 741 CAATGAGGAGAAGCGGACCTTGCTGGCCAGGCTTGTACGATCCACCAGGTTTGAGGAGTTCCTACAGCGAAAGT 814
Query 815 GGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCATTGACAAG 888
|||||||.||||||||.||||||||.||||||||.|||||.||||||||||||||||||||.||||||||.|.|
Sbjct 815 GGTCCTCGGAGAAGCGTTTTGGTCTGGAAGGCTGTGAGGTGCTGATCCCTGCCCTCAAGACAATCATTGATATG 888
Query 889 TCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTTGCAAATGT 962
||.||||..|||||.||||||||.|||||||||||.||||||||||||||.|||||||||||||||||||||||
Sbjct 889 TCAAGTGCAAATGGAGTGGACTATGTGATCATGGGGATGCCACACAGAGGACGGCTGAACGTGCTTGCAAATGT 962
Query 963 CATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGGCTCCGGAG 1036
||||||||||||||||||.||.||.||||||||.||.||.||||||||||||||||||||||||||.||.||.|
Sbjct 963 CATCAGGAAGGAGCTGGAGCAAATATTCTGTCAGTTTGACTCAAAGCTGGAGGCAGCTGATGAGGGTTCTGGGG 1036
Query 1037 ATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGAACATTACCTTGTCCTTG 1110
|..|||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||.||.|||||||||
Sbjct 1037 ACATGAAGTACCACCTGGGCATGTATCACCGCAGGATCAACCGTGTGACCGACAGAAACATCACTTTGTCCTTG 1110
Query 1111 GTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAGTTTTACTG 1184
|||||.|||||||||||.||.|||||.||||||||.||.||||||||.|||||||||||.||||||||.|||||
Sbjct 1111 GTGGCTAACCCTTCCCATCTAGAGGCTGCTGACCCTGTCGTGATGGGAAAGACCAAAGCTGAACAGTTCTACTG 1184
Query 1185 TGGCGACACTGAAGGGAAAAAGGTAAGGCC----------CAGAGAGAGGC-----GTGCAAGGCAG---ATCG 1240
|||.||||||||||||||||||||.|.|.| ||..|.||.|| .|||..|.||| ||||
Sbjct 1185 TGGAGACACTGAAGGGAAAAAGGTGATGTCTATCCTGCTGCATGGGGATGCTGCTTTTGCTGGCCAGGGCATCG 1258
Query 1241 TCA----AGGCC--CCATGTTCCAGCATGGAGTT-CCG--CT-CAC---------------------------C 1277
| | ||.|| ||||.| |||| ||.|| ||| || ||| |
Sbjct 1259 T-ATATGAGACCTTCCATCT--CAGC---GACTTGCCGTCCTACACAACCCATGGCACTGTTCATGTGGTTGTC 1326
Query 1278 AACA---------------------------------------------------------------------- 1281
||||
Sbjct 1327 AACAACCAGATTGGCTTCACCACAGACCCTCGGATGGCCCGCTCCTCTCCCTACCCCACTGATGTGGCCCGAGT 1400
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1401 GGTGAATGCCCCCATTTTCCATGTCAACTCAGATGACCCTGAAGCTGTCATGTATGTATGCAAGGTGGCAGCTG 1474
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1475 AGTGGAGAAACACCTTCCACAAGGATGTTGTAGTTGATCTGGTGTGTTATCGACGAAATGGCCACAATGAGATG 1548
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1549 GACGAACCTATGTTTACACAGCCACTCATGTACAAGCAGATCCGCAAGCAGAAGCCTGTACTGCAGAAGTATGC 1622
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1623 AGAATTGCTAGTCTCCCAGGGTGTCGTCAATCAGCCTGAGTACGAGGAGGAAATCTCCAAGTATGATAAGATCT 1696
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1697 GTGAGGAAGCATTTACCAGATCCAAAGATGAGAAGATCTTGCACATCAAGCACTGGCTGGATTCCCCCTGGCCT 1770
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1771 GGCTTTTTCACCCTGGATGGACAGCCCAGGAGCATGACCTGCCCCTCCACTGGCCTGGAGGAGGATGTCTTGTT 1844
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1845 CCACATTGGAAAGGTGGCCAGCTCTGTACCTGTGGAGAACTTTACTATCCATGGAGGGCTGAGCCGGATCTTGA 1918
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1919 AGACCCGCAGAGAGCTTGTGACGAACCGGACTGTGGACTGGGCCCTGGCAGAGTACATGGCATTTGGCTCACTG 1992
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 1993 CTGAAGGAAGGCATCCATGTGCGGCTGAGTGGCCAGGATGTGGAGCGGGGCACCTTCAGCCATCGCCACCATGT 2066
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2067 GCTCCATGATCAGAATGTTGACAAAAGAACCTGCATCCCCATGAACCACCTTTGGCCAAATCAGGCCCCTTACA 2140
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2141 CTGTATGCAACAGCTCGCTGTCTGAGTACGGTGTCCTGGGCTTTGAGCTGGGCTTTGCCATGGCTAGCCCTAAT 2214
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2215 GCTCTGGTTCTCTGGGAGGCCCAGTTTGGTGACTTCAACAACATGGCACAGTGCATCATTGACCAGTTCATCTG 2288
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2289 CCCAGGACAGGCAAAGTGGGTGCGGCAGAATGGCATTGTGCTCCTGCTGCCTCATGGCATGGAAGGCATGGGTC 2362
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2363 CCGAGCATTCCTCTGCCCGCCCAGAGCGGTTTCTGCAGATGTGCAATGATGACCCAGATGTCCTGCCTGACCTG 2436
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2437 CAGGAAGAAAACTTTGACATCAATCAGCTCTATGACTGCAACTGGATTGTTGTCAACTGTTCCACCCCTGGCAA 2510
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2511 CTTCTTCCATGTGCTGCGACGACAGATCTTGCTGCCCTTCCGGAAGCCGTTAATCGTCTTCACTCCCAAATCCC 2584
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2585 TCCTGCGCCACCCTGAGGCAAGAACTAGCTTTGACGAGATGCTGCCAGGAACGCACTTCCAGCGTGTGATCCCA 2658
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2659 GAAAATGGACCTGCAGCTCAGGACCCACACAAAGTCAAGAGACTTCTCTTCTGCACTGGGAAGGTGTACTATGA 2732
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2733 CCTCACCCGAGAGCGCAAAGCCAGGAACATGGAGGAGGAGGTGGCTATTACAAGGATTGAGCAGCTATCACCAT 2806
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2807 TCCCCTTTGACCTCCTGCTGAAAGAGGCACAGAAGTATCCCAATGCTGAGCTGGCCTGGTGCCAGGAAGAGCAC 2880
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2881 AAGAACCAAGGCTACTATGACTATGTCAAGCCAAGACTTCGTACCACCATTGACCGTGCTAAGCCTGTCTGGTA 2954
Query 1282 -------------------------------------------------------------------------- 1281
Sbjct 2955 TGCTGGCCGAGACCCGGCAGCTGCTCCAGCCACTGGCAACAAGAAAACACACCTGACAGAGCTGCAGCGCTTTC 3028
Query 1282 ----------------------------------------- 1281
Sbjct 3029 TGGACACAGCCTTTGACCTGGACGCATTCAAGAAATTCTCT 3069
