Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15538
- Subject:
- NM_001320709.2
- Aligned Length:
- 2904
- Identities:
- 180
- Gaps:
- 2724
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGTCCAACCCCGAACGGGGGGAGATTCTGCTCACGGAACTGCAGGGGGATTCCCGAAGTCTTCCGTTTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGAATGTGAGTGCTGTTCAAAAATTAGACTTTTCAGATACAATGGTGCAGCAGAAATTGGATGATATCAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCGAATTAAGAGAGAAATAAGGAAAGAACTGAAAATCAAAGAAGGAGCTGAAAATCTGAGGAAAGTCACAACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATAAAAAAAGTTTGGCTTATGTAGACAACATTTTGAAAAAATCAAATAAAAAATTAGAAGAACTACATCACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGCAGGAATTAAATGCACATATTGTTGTATCAGATCCAGAAGATATTACAGATTGCCCAAGGACTCCAGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCAAATAATGACCCTCGTTGTTCTACTAGCAACAATAGATTGAAGGCCTTACAAAAACAATTGGATATAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTAAAGTAAAACAAGGTGCAGAGAATATGATACAGATGTATTCAAATGGATCTTCAAAGGATCGGAAACTCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGTACAGCTCAGCAACTGCTCCAGGACAGCAAGACAAAAATAGAAGTCATACGAATGCAGATTCTTCAGGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCAGACTAATGAATTGGCTTTTGATAATGCAAAACCTGTGATAAGTCCTCTTGAACTTCGGATGGAAGAATTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGCATCATTTTAGGATAGAGTTTGCAGTAGCAGAAGGTGCAAAGAATGTAATGAAATTACTTGGCTCAGGAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTAACAGACAGAAAAGCACTTTCAGAAGCTCAAGCAAGATTTAATGAATCAAGTCAGAAGTTGGACCTTTTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTATTCATTAGAGCAAAGATTAAACGAAGTCCCCAAGAATCATCCCAAAAGCAGGATTATTATTGAAGAACTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCACTTGTTGCTGCATCACCAACACTAAGTCCACGTCAAAGTATGATATCTACGCAAAATCAATATAGTACACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATCCAAACCAGCAGCACTAACAGGTACTTTGGAAGTTCGTCTTATGGGCTGCCAAGATATCCTAGAGAATGTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGGACGGTCAAAAGCAACATCAGTTGCACTGCCTGGTTGGAGTCCAAGTGAAACCAGATCATCTTTCATGAGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGAACGAGTAAAAATGATGTCTGTGCTGTTTTGAAGCTCGATAATACTGTGGTTGGCCAAACTAGCTGGAAACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATTTCCAATCAGTCATGGGACCAGAAGTTTACACTGGAACTGGACAGGTCACGTGAACTGGAAATTTCAGTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTGGCGTGATTGGCGGTCTCTGTGTGCTGTAAAATTTCTGAGGTTAGAAGATTTTTTAGACAACCAACGGCAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCATGTGTCTCTATTTGGAACCACAGGGTACTTTATTTGCAGAGGTTACCTTTTTTAATCCAGTTATTGAAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGACCAAAACTTCAAAGACAAAAGAAAATTTTTTCAAAGCAACAAGGCAAAACATTTCTCAGAGCTCCTCAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGAATATTAATATTGCCACTTGGGGAAGGCTAGTAAGAAGAGCTATTCCTACAGTAAATCATTCTGGCACCTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCCCTCAAGCTCCTGTGCCTACTACAGTGCCAGTGGTTGATGTACGCATCCCTCAACTAGCACCTCCAGCTAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGATTCTACAGTAACCAAATTGGACTTTGATCTTGAGCCTGAACCTCCTCCAGCCCCACCACGAGCTTCTTCTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTGGAGAAATAGATGAATCTTCTGAATTAAGAGTTTTGGATATACCAGGACAGGATTCAGAGACTGTTTTTGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATTCAGAATGACAGAAATAGTATACTTCCAAAATCTCAATCTGAATACAAGCCTGATACTCCTCAGTCAGGCCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGAATATAGTGGTATTCAAGAACTTGAGGACAGAAGATCTCAGCAAAGGTTTCAGTTTAATCTACAAGATTTCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGTGTTGTGCTGTCTTGGGAAGAGGACATTTTGGAAAGGTGCTTTTAGCTGAATATAAAAACACAAATGAGATG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTTGCTATAAAAGCCTTAAAGAAAGGAGATATTGTGGCTCGAGATGAAGTAGACAGCCTGATGTGTGAAAAAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATTTTTGAAACTGTGAATAGTGTAAGGCATCCCTTTTTGGTGAACCTTTTTGCATGTTTCCAAACCAAAGAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATGTTTGCTTTGTAATGGAATATGCTGCCGGTGGGGACCTAATGATGCACATTCATACTGATGTCTTTTCTGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCAAGAGCTGTATTTTATGCTGCTTGTGTAGTTCTTGGGTTGCAGTATTTACATGAACACAAAATTGTTTATAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGATTTGAAATTGGATAACTTATTGCTAGATACAGAGGGCTTTGTGAAAATTGCTGATTTTGGTCTTTGCAAAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAGGAATGGGATATGGAGATAGAACAAGCACATTTTGTGGCACTCCTGAATTTCTTGCCCCAGAAGTATTAACA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAAACTTCTTATACAAGGGCTGTAGATTGGTGGGGCCTTGGCGTGCTTATATATGAAATGCTTGTTGGTGAGTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCCCTTTCCTGGTGATGATGAAGAGGAAGTTTTTGACAGTATTGTAAATGATGAAGTAAGGTATCCAAGGTTCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TATCTACAGAAGCCATTTCTATAATGAGAAGGCTGTTAAGAAGAAATCCTGAACGGCGCCTTGGGGCTAGCGAG 2664
Query 1 ------------------------------------------------------------ATGGACAAAAAAGT 14
||||||||||||||
Sbjct 2665 AAAGATGCAGAGGATGTAAAAAAGCACCCATTTTTCCGGCTAATTGATTGGAGCGCTCTGATGGACAAAAAAGT 2738
Query 15 AAAGCCACCATTTATACCTACCATAAGAGGACGAGAAGATGTTAGTAATTTTGATGATGAATTTACCTCAGAAG 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AAAGCCACCATTTATACCTACCATAAGAGGACGAGAAGATGTTAGTAATTTTGATGATGAATTTACCTCAGAAG 2812
Query 89 CACCTATTCTGACTCCACCTCGAGAACCAAGGATACTTTCGGAAGAGGAGCAGGAAATGTTCAGAGATTTTGAC 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 CACCTATTCTGACTCCACCTCGAGAACCAAGGATACTTTCGGAAGAGGAGCAGGAAATGTTCAGAGATTTTGAC 2886
Query 163 TACATTGCTGATTGGTGT 180
||||||||||||||||||
Sbjct 2887 TACATTGCTGATTGGTGT 2904
