Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15555
- Subject:
- XM_006502875.1
- Aligned Length:
- 5198
- Identities:
- 867
- Gaps:
- 4189
Alignment
Query 1 ATGGCCCCTGAGCCAGCCCCAGGGAGGACGATGGTGCCCCTTGTGCCTGCACTGGTGATGCTTGGTTTGGTGGC 74
|||||.||.|||||||||||||||||||.|||||||||||||||||||||.||.|||||||||||||||.||||
Sbjct 1 ATGGCTCCCGAGCCAGCCCCAGGGAGGAGGATGGTGCCCCTTGTGCCTGCTCTCGTGATGCTTGGTTTGATGGC 74
Query 75 AGGCGCCCATGGTGACAGCAAACCTGTCTTCATTAAAGTCCCTGAGGACCAGACTGGGCTGTCAGGAGGGGTAG 148
|||.||.|||||.|||||||||||.|||||..||||.|||||.||||||||||||||||||||.||||||||.|
Sbjct 75 AGGTGCTCATGGCGACAGCAAACCCGTCTTTGTTAAGGTCCCCGAGGACCAGACTGGGCTGTCGGGAGGGGTGG 148
Query 149 CCTCCTTCGTGTGCCAAGCTACAGGAGAACCCAAGCCGCGCATCACATGGATGAAGAAGGGGAAGAAAGTCAGC 222
|||||||||||||||||||.|||||.|||||||||||.||.||.||.|||||||||||||||||||||||||||
Sbjct 149 CCTCCTTCGTGTGCCAAGCCACAGGGGAACCCAAGCCTCGAATTACGTGGATGAAGAAGGGGAAGAAAGTCAGC 222
Query 223 TCCCAGCGCTTCGAGGTCATTGAGTTTGATGATGGGGCAGGGTCAGTGCTTCGGATCCAGCCATTGCGGGTGCA 296
|||||||||||.|||||.|||||||||||.|||||.||||||||||||||.||||||||||||||.||.|||||
Sbjct 223 TCCCAGCGCTTTGAGGTAATTGAGTTTGACGATGGAGCAGGGTCAGTGCTGCGGATCCAGCCATTACGAGTGCA 296
Query 297 GCGAGATGAAGCCATCTATGAGTGTACAGCTACTAACAGCCTGGGTGAGATCAACACTAGTGCCAAGCTCTCAG 370
||||||.|||||||||||||||||.|||||.||.|||||.||.||.|||||||||||.|||||||||||.||||
Sbjct 297 GCGAGACGAAGCCATCTATGAGTGCACAGCCACGAACAGTCTCGGGGAGATCAACACAAGTGCCAAGCTGTCAG 370
Query 371 TGCTCGAAGAGGAACAGCTGCCCCCTGGGTTCCCTTCCATCGACATGGGGCCTCAGCTGAAGGTGGTGGAGAAG 444
||||.||||||||.||||||||..||||||||||..|.|||||||||||.||||||||||||||||||||||||
Sbjct 371 TGCTTGAAGAGGACCAGCTGCCGTCTGGGTTCCCGACTATCGACATGGGACCTCAGCTGAAGGTGGTGGAGAAG 444
Query 445 GCACGCACAGCCACCATGCTATGTGCTGCAGGCGGAAATCCAGACCCTGAGATTTCTTGGTTCAAGGACTTCCT 518
|..|||||.|||||||||||.|||||.||.||.||.||.||||||||||||||.|||||||||||.||||||||
Sbjct 445 GGTCGCACTGCCACCATGCTGTGTGCAGCCGGTGGGAACCCAGACCCTGAGATCTCTTGGTTCAAAGACTTCCT 518
Query 519 TCCTGTAGACCCTGCCACGAGCAACGGCCGCATCAAGCAGCTGCGTTC------------------AGGTGCCT 574
||||||.||||||||..|.||||||||.||.|||||.||||||||.|| ||||||.|
Sbjct 519 TCCTGTGGACCCTGCTGCAAGCAACGGTCGTATCAAACAGCTGCGATCAGGTGGTTCACCAATCAGAGGTGCAT 592
Query 575 TGCAGATAGAGAGCAGTGAGGAATCCGACCAAGGCAAGTACGAGTGTGTGGCGACCAACTCGGCAGGCACACGT 648
||||||||||||||||.|||||.||.||||||||||||||||||||||||||.||||||||.|||||||||||.
Sbjct 593 TGCAGATAGAGAGCAGCGAGGAGTCTGACCAAGGCAAGTACGAGTGTGTGGCCACCAACTCTGCAGGCACACGC 666
Query 649 TACTCAGCCCCTGCGAACCTGTATGTGCGAG---GT-------------------------------------A 682
|||||.|||||.||.|||||||||||||||| || |
Sbjct 667 TACTCGGCCCCCGCCAACCTGTATGTGCGAGTGCGTCGCGTGGCTCCTCGTTTCTCCATCCCTCCCAGCAGCCA 740
Query 683 AG----GA--------------------CTCA-------GGCAGT-GCCTGGCCCCTG---------------- 708
|| || |||| |||||| |.|..||||.||
Sbjct 741 AGAGGTGATGCCGGGCGGCAGCGTGAATCTCACATGTGTGGCAGTGGGCGCGCCCATGCCGTATGTGAAATGGA 814
Query 709 ------------------TCACCACAGAG---------------------------CTG-----------TG-- 724
|.||||.|||| ||| ||
Sbjct 815 TGATGGGCGCCGAGGAACTGACCAAAGAGGATGAGATGCCAGTCGGCCGAAATGTTCTGGAGCTCAGCAATGTC 888
Query 725 -------CTGC-------ACCTGCCGGGC--TCTCT------------------------GCCCAG-------- 750
|||| |||||...||| ||||| ||||||
Sbjct 889 ATGCGATCTGCCAACTATACCTGTGTGGCCATCTCTTCATTAGGCATGATAGAAGCCACGGCCCAGGTCACAGT 962
Query 751 ---AGCCCT-----------------------TGGTG-CAGACACGCAAGGGACTGCCATGGGCCCAGT----C 793
|||.|| ||||| ||||.|| .||.|||| ||||| |
Sbjct 963 AAAAGCTCTGCCAAAGCCTCCAATTGATCTTGTGGTGACAGAGAC------AACCGCCA-----CCAGTGTTAC 1025
Query 794 TCT----------TCT--------CCTTCCTGCTTCTTTCT---GCA-----------GCAGCAGCAACAG--- 832
||| ||| |...||||..||.|||| ||| |||||.|..||||
Sbjct 1026 TCTGACATGGGACTCTGGAAATACCGAGCCTGTGTCCTTCTACGGCATCCAGTACCGCGCAGCTGGCACAGACG 1099
Query 833 ----CTCCC----ACTG--------GGCAAG--------------TTCCTGGCGTCTGCCACTACTTC------ 870
||.|| |.|| |||.|| ||..||||.||.|||.|| .|||
Sbjct 1100 GCCCCTTCCAGGAAGTGGATGGTGTGGCCAGCACCCGATACAGCATTGGTGGCCTCAGCCCCT-TTTCGGAATA 1172
Query 871 -GCCTTCCTT-----------------CCTTG-------------CAG---------------GCCCATGGGGA 898
||.||||.| |.||| ||| .|.||.||||.
Sbjct 1173 TGCTTTCCGTGTGTTGGCTGTTAACAGCATTGGGCGAGGACCACCCAGTGAGGCAGTGCGAGCACGCACGGGGG 1246
Query 899 AGCAGCCACTCT-------TGGGAGCATTTGTATCTTTTGTAGG-------TCTT---GCC-GCA------TGG 948
|||||.|||.|| |..|.|| |.|.||.||| .||| ||| ||| |||
Sbjct 1247 AGCAGGCACCCTCCAGCCCTCCGCGC--------CGTGTGCAGGCTCGAATGCTTAGCGCCAGCACCATGCTGG 1312
Query 949 GCCCG---------------GAGCCCCAT----------GGGAATTTGGAG----CCAT---CCA-AT--CCGA 987
.||.| ||||||.|| |||.||.|.|.| |.|| ||| || ||||
Sbjct 1313 TCCAGTGGGAACCACCTGAAGAGCCCAATGGCCTGGTACGGGGATATCGCGTCTACTATACCCCAGATTCCCGA 1386
Query 988 CTTC--TTGGTGTATGTGCATGTGTGTGTGCAC-------ACACGGGCACA------CTTATCTGTGTG----- 1041
|..| ||| .|.||.|| |||| ||||.|.|.|| ||||.|...|||
Sbjct 1387 CGCCCTTTG-----AGCGCCTG-------GCACAAGCATAACACTGACGCAGGACTCCTTACCACCGTGGGCAG 1448
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1449 CCTGCTACCTGGCATCACCTACAGCCTCCGAGTCCTTGCCTTCACTGCTGTGGGTGACGGCCCACCCAGCCCCA 1522
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1523 CCATCCAAGTCAAGACACAGCAGGGAGTGCCTGCACAGCCTGCGGACTTCCAGGCTAACGCTGAGTCGGACACC 1596
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1597 AGGATCCAGCTCTCGTGGCTGCTGCCCCCGCAGGAGCGGATCGTCAAGTATGAGCTGGTGTACTGGGCAGCCGA 1670
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1671 GGATGAGGGCCAGCAGCACAAGGTGACCTTCGACCCCACCTCCTCCTACACTCTGGAGGACCTGAAGCCTGACA 1744
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1745 CATTGTACCACTTCCAGCTGGCTGCCCGTTCAGATTTGGGGGTGGGCGTCTTCACGCCCACCGTAGAGGCCCGT 1818
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1819 ACAGCACAGTCCACCCCATCAGCCCCTCCCCAGAAGGTGACATGTGTGAGCACGGGCTCCACCACGGTCCGGGT 1892
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1893 AAGTTGGGTTCCACCGCCGGCCGACAGCCGCAACGGCATTATCACCCAGTACTCCGTGGCCTATGAGGCAGTGG 1966
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1967 ACGGCGAAGACCGTAAGCGACATGTGGTGGATGGCATCAGCCGTGAGCATTCCAGCTGGGACCTGCTGGGCCTG 2040
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2041 GAGAAGTGGACGGAGTACCGGGTGTGGGTGCGGGCACACACAGATGTGGGCCCTGGCCCTGAGAGCAGCCCGGT 2114
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2115 GCTGGTGCGCACCGATGAGGACGTGCCTAGCGGGCCACCACGGAAGGTAGAGGTTGAGCCTCTGAACTCCACTG 2188
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2189 CTGTGCATGTCTCCTGGAAGCTGCCCGTCCCCAACAAGCAGCACGGACAGATTCGTGGCTACCAGGTCACCTAT 2262
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2263 GTGCGGTTGGAGAATGGTGAGCCCCGAGGCCAACCCATCATCCAGGATGTCATGCTGGCTGAGGCTCAGGAGAC 2336
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2337 CACCATCAGCGGCCTCACCCCCGAGACCACCTACTCCATCACCGTCGCTGCCTACACCACTAAGGGGGATGGTG 2410
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2411 CCCGAAGCAAGCCCAAGGTGGTTACTACAACAGGGGCAGTGTTTGCCAAGAATTTCCGTGTGGCCGCTGCGATG 2484
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2485 AAGACATCTGTGCTGCTCAGTTGGGAGGTCCCCGACTCTTATAAGTCAGCTGTGCCCTTCAAGATCCTGTACAA 2558
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2559 TGGGCAGAGCGTGGAGGTGGATGGGCACTCGATGCGGAAGCTGATTGCAGACCTGCAACCCAACACGGAGTACT 2632
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2633 CCTTCGTCCTGATGAATCGTGGCAGTAGCGCCGGGGGCCTACAGCACCTGGTGTCCATCCGCACTGCCCCGGAC 2706
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2707 CTCCTACCCCAGAAGCCACTGCCTGCCTCCGCCTTTATAGAGGATGGCCGCTTCTCCCTCTCCATGCCTCAAGT 2780
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2781 GCAGGACCCCTCGCTAGTCAGGTGGTTCTACATTGTGGTGGTGCCCATTGACCGTGTGGGCGGGAACTTGCTGG 2854
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2855 CACCAAGATGGAACACACCAGAGGAGTTGGAGCTGGACGAGCTTCTGGAGGCCATCGAGCAGGGCGAGGAGAAA 2928
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2929 CAGCGGAGGCGCCGGCGCCAAGCAGAGCGGCTGAAGCCTTATGTGGCGGCCCAAGTGGATGTGCTCCCTGACAC 3002
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3003 CTTCACCCTGGGGGACAAGAAGAGCTACCGCGGCTTCTACAACCGGCCCCTGTCTCCGGATCTGAGTTACCAGT 3076
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3077 GCTTCGTTCTCGCCTCCCTCAAGGAACCCATGGACCAGAAGCGCTACGCCTCCAGCCCCTACTCGGACGAGATT 3150
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3151 GTAGTCCAGGTGACGCCAGCACAGCAGCAGGAGGAGCCCGAGATGCTGTGGGTGACAGGCCCTGTCCTGGCGGT 3224
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3225 CATTCTCATCATACTCATTGTCATCGCCATCCTCCTGTTCAAGAGGAAGAGAACACACTCCCCATCATCAAAGG 3298
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3299 ATGAGCAGTCAATCGGGCTGAAGGACTCCCTGTTGGCCCACTCTTCTGACCCTGTGGAGATGCGAAGGCTTAAC 3372
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3373 TACCAGACCCCAGGTTCCAGTGCCCCCAGTTGCCCGAATATCTCAAGTATGCGAGACCACCCGCCCATCCCCAT 3446
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3447 CACTGACCTGGCAGACAATATTGAGCGCCTCAAAGCCAACGATGGGCTCAAGTTCTCCCAGGAGTATGAGTCCA 3520
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3521 TTGACCCTGGACAGCAGTTCACATGGGAGAATTCCAACTCGGAGGTGAACAAGCCCAAGAACCGCTATGCAAAT 3594
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3595 GTCATTGCCTATGACCATTCTCGAGTCCTCCTCACCTCCATTGATGGTGTTCCTGGGAGTGACTACATCAATGC 3668
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3669 CAACTACATTGATGGCTACCGAAAGCAGAATGCCTACATCGCCACACAGGGTCCGCTGCCCGAGACCATGGGCG 3742
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3743 ATTTCTGGAGGATGGTGTGGGAACAGCGCACAGCCACAGTGGTCATGATGACCAGGCTAGAGGAGAAATCCCGG 3816
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3817 GTGAAGTGTGATCAGTATTGGCCAGTCCGTGGCACTGAGACCTATGGCCTCATTCAGGTGACCCTGGTGGACAC 3890
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3891 TGTGGAGTTGGCCACATACACCATGCGCACCTTTGCCCTCCATAAGAGTGGCTCCAGTGAGAAGCGTGAGCTGC 3964
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3965 GTCAGTTCCAGTTCATGGCCTGGCCAGACCACGGCGTTCCTGAGTACCCCACTCCCATCTTGGCCTTCCTGAGA 4038
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4039 CGGGTCAAGGCCTGTAACCCACTAGATGCGGGGCCCATGGTGGTGCATTGCAGTGCGGGTGTGGGGCGCACAGG 4112
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4113 CTGCTTCATCGTCATCGACGCAATGCTGGAGCGTATGAAGCACGAGAAGACGGTTGACATCTATGGCCACGTGA 4186
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4187 CGTGCATGCGCTCACAAAGGAACTACATGGTGCAGACCGAGGACCAGTATGTGTTCATCCACGAGGCCCTGCTA 4260
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4261 GAGGCTGCCATGTGCGGACACACCGAGGTGCTCGCTCGGAACCTCTATGCCCACATCCAGAAGCTAGGCCAAGT 4334
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4335 GCCTCCCGGGGAGAGCGTCACGGCCATGGAACTTGAGTTCAAGTTGCTGGCCAACTCCAAGGCCCACACGTCGC 4408
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4409 GCTTTGTCAGTGCCAACCTGCCCTGCAACAAGTTCAAGAACCGCCTAGTGAACATCATGCCCTATGAGCTGACC 4482
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4483 CGAGTGTGCTTGCAACCCATCCGTGGTGTGGAGGGCTCAGACTACATCAATGCCAGCTTTCTAGATGGCTACAG 4556
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4557 ACAGCAGAAGGCCTACATAGCTACACAGGGGCCTCTGGCAGAGAGCACCGAGGACTTCTGGCGCATGTTATGGG 4630
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4631 AGCACAATTCCACCATCATCGTCATGCTGACCAAGCTTCGGGAGATGGGCAGGGAGAAATGTCACCAGTACTGG 4704
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4705 CCAGCAGAGCGCTCCGCTCGCTATCAGTACTTCGTTGTTGACCCGATGGCTGAGTACAACATGCCCCAGTATAT 4778
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4779 TCTGCGTGAATTCAAAGTCACAGACGCCCGGGATGGGCAGTCAAGGACAATCCGACAGTTCCAGTTTACAGACT 4852
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4853 GGCCAGAGCAAGGAGTACCCAAAACAGGTGAAGGCTTCATCGACTTCATCGGGCAGGTGCACAAGACAAAGGAG 4926
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4927 CAGTTTGGCCAGGATGGGCCCATCACGGTGCACTGCAGTGCTGGTGTGGGCCGCACCGGTGTGTTCATCACCCT 5000
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5001 GAGCATTGTCCTGGAGCGCATGCGGTATGAGGGTGTGGTTGACATGTTCCAGACCGTGAAGACCCTCCGCACAC 5074
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5075 AGCGCCCTGCAATGGTGCAGACAGAGGACCAATACCAGCTGTGCTACCGTGCGGCCCTGGAATACCTCGGCAGC 5148
Query 1042 ------------------ 1041
Sbjct 5149 TTTGATCACTATGCAACG 5166
