Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15683
- Subject:
- NM_014858.4
- Aligned Length:
- 2149
- Identities:
- 850
- Gaps:
- 1235
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGAGGTGCAGATCGGACGAGCTGCAGCAACAACAGGGCGAGGAGGATGGAGCTGGGCTGGAAGATGCCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCCACCTGCCGGGCGCGGACCTCCGGCCTGGGGAGACCACGGGTGCTAACTCTGCTGGCGGGCCAACTTCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGCCGGCGCTGCCGCGGCGCCCAACCCAGGTCCCCGAAGCAAGCCTCCTGATTTAAAGAAAATCCAGCAGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCAGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTCTCGGGAAAGGGAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAGACGTCTCAGGATTCCCAGCAGCATCAGCAGCAGCAGGGTATGTCCGACCATGACTCCCCAGATGAGAAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCGCTCTCCGGAGATGCATCGCGTCTCCTACGCCATGTCCCTGCACGACCTGCCCGCCCGGCCCACCGCCTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACCGCGTGCTGCAGCAGATCCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAGCCTGCACAGCAGCAGTGGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGCAGCAGCGGGAGCAGCAGCCGGCGCACCAAGAGTAGCTCCCTGGAGCCCCAGCGTGGCAGCCCTCACCTGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCGCAAGGCCCCCCAGGACAGCAGCCTGGCCGCCATCCTGCACCAGCACCAGTGCCGTCCCCGCTCTTCCTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCACCGACACTGCTCTGCTGCTGGCCGACGGCAGCAACGTGTACCTCCTGGCTGAGGAGGCCGAAGGCATCGG 740
Query 1 --------------ATGGAG-------------GAG--------------AAGGTG------------------ 15
|.|||| ||| |.||||
Sbjct 741 GGACAAGGTCGATAAGGGAGACCTGGTGGCCCTGAGCCTCCCCGCCGGCCATGGTGACACCGACGGCCCCATCA 814
Query 16 GCCT--ACCAGTCCTATGAGAGGGCACGGGACATCCAG------GAGGCCG----TGGAGTCCTG--------- 68
|||| ||..|.||.||| ||||||.||||..|||| .|||||| ||....||||
Sbjct 815 GCCTGGACGTGCCCGATG---GGGCACCGGACCCCCAGCGGACCAAGGCCGCCATTGACCACCTGCACCAGAAG 885
Query 69 --CCTGACCCGGGTCAC---------CAAGCTGGAGCTGCAG-------------------------------- 99
||||| .|.|||| ||||.|.||||.|.||
Sbjct 886 ATCCTGA---AGATCACCGAGCAGATCAAGATTGAGCAGGAGGCTCGCGACGACAATGTGGCAGAGTATCTGAA 956
Query 100 ------CAGCAAC-------AGCAGCAGGTGGTAC--------------------------------------- 121
||.|||| |||||||||||..||
Sbjct 957 ACTGGCCAACAACGCGGACAAGCAGCAGGTGTCACGCATCAAGCAAGTGTTCGAGAAGAAGAACCAGAAGTCAG 1030
Query 122 ---------------------------AGCTGGAG----------GGCG-----TGGAGAATG---CCAACG-- 148
|||||||| |||| .|||||.|| ..||||
Sbjct 1031 CCCAGACCATCGCCCAGCTGCACAAGAAGCTGGAGCACTACCGCCGGCGCCTGAAGGAGATTGAGCAGAACGGG 1104
Query 149 ----CGCGG------------GCGCTGCTGGGC---------------AAGTTCAT------CAACGTGCGCGC 185
||||| |.|||||.||.| |||..|.| ||||||||||||
Sbjct 1105 CCCTCGCGGCAGCCCAAGGACGTGCTGCGGGACATGCAGCAGGGGCTGAAGGACGTGGGCGCCAACGTGCGCGC 1178
Query 186 AGGCATCAGCGGCTTTGGGGGCGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTGGCCTCTCACAGGCCACCC 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 AGGCATCAGCGGCTTTGGGGGCGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTGGCCTCTCACAGGCCACCC 1252
Query 260 ACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTGCCAGCCTCATCCGCAACAAGTTTGGCAGTGCTGACAACATC 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 ACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTGCCAGCCTCATCCGCAACAAGTTTGGCAGTGCTGACAACATC 1326
Query 334 GCCCACCTGAAGGACCCCCTGGAAGATGGGCCCCCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCCACACT 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 GCCCACCTGAAGGACCCCCTGGAAGATGGGCCCCCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCCACACT 1400
Query 408 CGTCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAGGCAGCA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1401 CGTCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAGGCAGCA 1474
Query 482 ACTCTGGGGCTGGGCCTGGTGGGGCGCTGGGGAGCCCTAAGTCCAATGCACTGTATGGTGCTCCTGGAAACCTG 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475 ACTCTGGGGCTGGGCCTGGTGGGGCGCTGGGGAGCCCTAAGTCCAATGCACTGTATGGTGCTCCTGGAAACCTG 1548
Query 556 GATGCTCTGCTGGAAGAGCTACGGGAGATCAAGGAGGGACAGTCTCACCTGGAGGACTCCATGGAAGACCTGAA 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549 GATGCTCTGCTGGAAGAGCTACGGGAGATCAAGGAGGGACAGTCTCACCTGGAGGACTCCATGGAAGACCTGAA 1622
Query 630 GACTCAGCTGCAGAGGGACTACACCTACATGACCCAGTGCCTGCAGGAGGAGCGCTACAGGTACGAGCGGCTGG 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 GACTCAGCTGCAGAGGGACTACACCTACATGACCCAGTGCCTGCAGGAGGAGCGCTACAGGTACGAGCGGCTGG 1696
Query 704 AGGAGCAGCTCAACGACCTGACTGAGCTTCATCAGAACGAGATGACGAACCTGAAGCAGGAGCTGGCCA----- 772
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 AGGAGCAGCTCAACGACCTGACTGAGCTTCATCAGAACGAGATGACGAACCTGAAGCAGGAGCTGGCCAGCATG 1770
Query 773 ------------------CACTTC-------------------TCCAGGAGGGACCCTTGGACTTCT------- 802
||.|.| ||||||||| ||.||||.|.||
Sbjct 1771 GAGGAGAAGGTGGCCTACCAGTCCTATGAGAGGGCACGGGACATCCAGGAGG---CCGTGGAGTCCTGCCTGAC 1841
Query 803 --------------------------------------TTGTGTGTCCAGTT--------TGG----------- 819
..||| ||.|||.| |||
Sbjct 1842 CCGGGTCACCAAGCTGGAGCTGCAGCAGCAACAGCAGCAGGTG-GTACAGCTGGAGGGCGTGGAGAATGCCAAC 1914
Query 820 --------CCTCCTGCCCAAACTGTCCAT--------TCCAGCAGCTCCTGCCC--CCTTCT-CTGTACTTG-- 872
.||.|||..||| ||.||| |||.|..||||.||.|| .||.|| .|||.|.||
Sbjct 1915 GCGCGGGCGCTGCTGGGCAA---GTTCATCAACGTGATCCTGGCGCTCATGGCCGTGCTGCTGGTGTTCGTGTC 1985
Query 873 ------------CTTCTGTC----------TGA-------------------------CACCTTC----TC--- 892
|||| .|| ||| ||||.|| ||
Sbjct 1986 CACCATCGCCAACTTC-ATCACGCCCCTCATGAAGACACGCCTGCGCATCACCAGCACCACCCTCCTGGTCCTC 2058
Query 893 --CCTGTTGGCCT------GAAG----GGAGCTTAGAATGCAGC-CCTA---CCTGGAGA-------------- 936
|||||| ||| |||| || ||.|.|..| |||| |||||||.
Sbjct 2059 GTCCTGTT--CCTCCTCTGGAAGCACTGG------GACTCCCTCACCTACCTCCTGGAGCACGTGTTGCTGCCC 2124
Query 937 --- 936
Sbjct 2125 AGC 2127
