Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15747
- Subject:
- NM_001037221.2
- Aligned Length:
- 2265
- Identities:
- 818
- Gaps:
- 1362
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGTTTCGCGACCAGGTCGGGGTGCTGGCGGGCTGGTTTAAGGGCTGGAACGAGTGCGAGCAGACTGTTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTGCTGTCGCTGCTCAAGCGCGTAAGCCAGACCCAGGCCCGCTTCCTTCAGCTCTGCCTGGAGCACTCGCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGACTGCGCCGAGCTGCACGTCCTGGAAGGAGAGGCCAACAGCCCGGGAATCATTAACCAATGGCAACAGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCAAGGATAAAGTGATTTCCCTTCTGCTAACTCACCTGCCTTTGCTGAAGCCAGGAAACCTCGACGCGAAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAGTATATGAAACTGCTGCCCAAGATCCTGGCACACTCTATCGAACACAACCAGCACATTGAGGAGAGCAGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCTGCTGTCCTATGCTTTGATCCACCCAGCCACTTCCTTGGAAGACCGCAGCGCACTAGCCATGTGGCTGAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACTTGGAGGACCGCACATCCACCAGCTTTGGTAGCCAGAACCGAGGCCGCTCGGACTCTGTGGATTATGGACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACGCATTACTATCACCAAAGACAGAACTCTGACGATAAGCTCAATGGCTGGCAGAACTCTCGGGATTCTGGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTGCATCAGTGCCTCCAACTGGCAGGACAAGAGCCTGGGCTGTGAGAATGGCCATGTGCCCCTCTACTCTTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCGTCTGTCCCTGCCACAATCAACACGATTGGAACCGGCGCAAGCACGATTCTCTCAGGCCAGGCACACCACAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCTTTGAAACGATCTGTGTCCCTTACCCCACCCATGAATGTGCCAAACCAGCCTCTAGGACATGGATGGATGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCATGAGGACTTACGAGCTAGAGGACCTCAGTGCCTCCCATCCGATCATGCCCCCCTGTCTCCACAAAGCAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAGCCTCTTCAGGAAGTGGTGGGAGTGAACACTTAGAAGATCAGACCACTGCTCGTAACACATTCCAAGAAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGTAGTGGTATGAAAGATGTTCCAGCTTGGTTAAAAAGCCTCCGCCTGCACAAGTACGCTGCGCTCTTCTCGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGATGACTTATGAGGAAATGATGGCCCTCACTGAGTGTCAACTGGAGGCTCAGAATGTTACCAAAGGCGCAAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACAAAATTGTAATCAGTATTCAGAAGCTCAAAGAAAGACAGAACCTCCTGAAGTCTTTGGAAAGGGACATCAT 1184
Query 1 -------------------------------------------ATGATCCTGACTCCGATCAAGGCCTACAGCT 31
|||||||||||.||.||||||||||||||||
Sbjct 1185 CGAAGGGGGCAGCCTGCGCACCCCCCTCCAGGAGCTACATCAGATGATCCTGACACCCATCAAGGCCTACAGCT 1258
Query 32 CCCCGAGCACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGGCCCCGCGTCAGCCCTCACTGATGGGCCCCGAG 105
|.||.||.||||||||.||||..|||.|||||| |||||||||||||| |||
Sbjct 1259 CTCCCAGTACCACCCCTGAGGTGCGCTGCCGGG------------------AGCCCTCACTGATG------GAG 1308
Query 106 AGCCAGAGCCCCGACTGCAAAGATGGGGCCGCAGC---CACTGGCGCCACGGCCACCCCCTCGGCCGGGGCCAG 176
||||..|||||.|||||||||||..|.||.||||| |||..|||||||.||||...||||.|||||.|||||
Sbjct 1309 AGCCCAAGCCCTGACTGCAAAGACAGCGCTGCAGCAGTCACCAGCGCCACAGCCAGTGCCTCAGCCGGTGCCAG 1382
Query 177 CGGGGGGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGAGCTGGCCGTCGCCCCCCTGCCAGAGGGGGACC 250
|||.||.||.||.||.|.||||||||||||||||||.||.||||||||.||||||||.|||||.||||||||||
Sbjct 1383 CGGTGGACTGCAACCACCCCAGCTGAGCAGCTGCGACGGAGAGCTGGCTGTCGCCCCTCTGCCGGAGGGGGACC 1456
Query 251 TCCCCGGGCAGTTCACACGCGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCTGATGAGGAAAAT 324
||||.|||||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||.||||||
Sbjct 1457 TCCCGGGGCAGTTCACCCGAGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCCGATGAAGAAAAT 1530
Query 325 ATAAGTTCCTATTTACAGCTCATAGACAAGTGTCTAATTCATGAGGCATTTACAGAGACACAGAAAAAAAGATT 398
|||||.||||||.||||||||.|||||||||||||..|||||||||||||||||||||||||||||||||||||
Sbjct 1531 ATAAGCTCCTATCTACAGCTCTTAGACAAGTGTCTTGTTCATGAGGCATTTACAGAGACACAGAAAAAAAGATT 1604
Query 399 GTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGAT 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1605 GTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGAT 1678
Query 473 ATCGACAGCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCTCCCGACGGCTGGCTCTGTGGGCGGTGGCATG 546
|||||||||||||||||||.|||||||||||.||||||||||||||.||.||..|||||||||||.|.||||||
Sbjct 1679 ATCGACAGCAAAGAAATCGTGGCTTTGGGCAGTCCAACTCCCTCCCAACAGCCAGCTCTGTGGGCAGCGGCATG 1752
Query 547 GGCAGACGGAACCCGCGCCAGTACCAGATCCCCTCTCGGAACGTCCCTTCCGCCCGCCTGGGCCTCTTGGGCAC 620
||||||||||||||.||.||||||||||||.|.||||||||.|||||||||||||||||.||.|||.|||||||
Sbjct 1753 GGCAGACGGAACCCACGACAGTACCAGATCGCATCTCGGAATGTCCCTTCCGCCCGCCTTGGTCTCCTGGGCAC 1826
Query 621 CAGTGGATTCGTCAGCTCCAACCAGCGCAACACCACAGCTACCCCCACCATCATGAAACAAGGAAGACAGAACC 694
|||||||||.||||||||||||||||||.|||||.|.||.|.||||||||||||||||||||||||||||||||
Sbjct 1827 CAGTGGATTTGTCAGCTCCAACCAGCGCCACACCGCTGCCAACCCCACCATCATGAAACAAGGAAGACAGAACC 1900
Query 695 TGTGGTTTGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCGCACCCACAGCTCAGTCCAGAGGACCCGCTCG 768
|.||||||||||||||.|||||||||||.||||||||.|||||||||||||||||.|||||||.||||||||||
Sbjct 1901 TCTGGTTTGCCAACCCTGGGGGCAGCAACAGCATGCCCAGCCGCACCCACAGCTCCGTCCAGAAGACCCGCTCG 1974
Query 769 CTGCCCGTGCACACTTCCCCACAGAACATGCTGATGTTCCAGCAGCCAGGTTCCCAAGTTCACAGTGGACTGTG 842
|||||||||||.|||||||||||.||||||||||||||||||||.||
Sbjct 1975 CTGCCCGTGCATACTTCCCCACAAAACATGCTGATGTTCCAGCAACC--------------------------- 2021
Query 843 TTTAACAGACCTTAGAGGTTGGTTGAGCCTGAGTGGAGCCCCTTCCATGCCAGCGCTGACAGTCCCCAAGTCCT 916
Sbjct 2022 -------------------------------------------------------------------------- 2021
Query 917 CCCAGGGAGAATTCCAGCTTCCCGTGACCGAACCTGACATCAACAACAGGCTGGAGTCGTTGTGCCTCAGTATG 990
||||||.||||||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||
Sbjct 2022 -------AGAATTTCAGCTTCCTGTGACTGAACCTGACATCAACAATAGGCTGGAGTCCTTGTGCCTCAGTATG 2088
Query 991 ACCGAACACGCCCTGGGAGACGGGGTTGACCGGACCTCCACCATC 1035
||.||.||.||||||||||||||||||||||||||||||||.|||
Sbjct 2089 ACGGAGCATGCCCTGGGAGACGGGGTTGACCGGACCTCCACAATC 2133
