Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15750
- Subject:
- XR_001755677.2
- Aligned Length:
- 2393
- Identities:
- 1127
- Gaps:
- 1263
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTCTCTTTGTCGGAGGAGCTCCTCTGTTTCCTGTGCAGTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCC 74
Query 1 -----------------ATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTG 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGCGGACGCAGGAGCGATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTG 148
Query 58 GCTGGACATGTGGGGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTGGACATGTGGGGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA 222
Query 132 CATCCTGTGCGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAG 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATCCTGTGCGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAG 296
Query 206 GGGAGCCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGAGCCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTG 370
Query 280 AGGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCCTAT 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCCTAT 444
Query 354 CGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTACACACCT 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTACACACCT 518
Query 428 ACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGTCTCTGGACCTA 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGTCTCTGGACCTA 592
Query 502 GTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAGAG 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAGAG 666
Query 576 TGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTCCAGATCTATCAGTTTCCTA 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTCCAGATCTATCAGTTTCCTA 740
Query 650 CAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGCCGTTTGCTGTCATTGGCAGCACA 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGCCGTTTGCTGTCATTGGCAGCACA 814
Query 724 GAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCACTGTGCAGGTTGAAAACGA 797
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCACTGTGCAG----------- 877
Query 798 GGCCCACTGCGACTTTGTGAAGCTGCGGGAGATGCTGATTCGGGTCAACATGGAGGATCTGCGGGAGCAGACCC 871
Sbjct 878 -------------------------------------------------------------------------- 877
Query 872 ACACCCGGCACTATGAGCTGTATCGCCGCTGTAAGCTGGAGGAGATGGGCTTCAAGGACACCGACCCTGACAGC 945
Sbjct 878 -------------------------------------------------------------------------- 877
Query 946 AAACCCTTCAGTTTACAGGAGACATATGAGGCCAAAAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 ----------GTTTACAGGAGACATATGAGGCCAAAAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGA 941
Query 1020 GGAGATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGC 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 GGAGATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGC 1015
Query 1094 ACGAGAAGTTTGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTG 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 ACGAGAAGTTTGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTG 1089
Query 1168 GATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCCCCAGTCCCAGGGCTCCCAGGCTGG 1241
|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1090 GATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGG 1163
Query 1242 AGGCTCACAGACTCTGAAGAGAGACAAAGAGAAGAAAAA-------TAATC-------CATGGCTG-TGTACTG 1300
||||||||||||||||||||||||||||||||||||||| ||||| || ||.| ||.|||
Sbjct 1164 AGGCTCACAGACTCTGAAGAGAGACAAAGAGAAGAAAAACTTTTTTTAATCTTGTCTTCA--GCAGCTGCACT- 1234
Query 1301 AA------------------------------------------------------------------------ 1302
||
Sbjct 1235 AAGTCTAAAGGAGAAGACTGCCATTATAGAAGAGTTAGGGTTCCATATTGTCTCAAATCAGAAATCAACCAATT 1308
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1309 TCCTCTCCCCTCAAACTGCAAGCACACACACATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTCC 1382
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1383 AGGCAAGAAGCTCTCTTCCTGACTCACATGGTATTTTAAATGGAAGTGTCTTGTCCTAACTAACAAGGCAGGAA 1456
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1457 AAGAACCATCAGAGCTGGAAAATGGACGAAATGTAACCTCAGAGAAACAACTACAGGACCACTCACCCAAGTGT 1530
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1531 AAGTGACTGGGGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTTCACAAGGTTTTGTTTGAGTTTT 1604
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1605 ATGTTTTTCTTTTAAACATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGAATAT 1678
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1679 GCAAGAGAAAGTCAAGTGACATTTGTATCTTCTTCAGCATTCGCAGACCTTCTATAGATTCCAGCAAAGGGGGA 1752
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1753 AAATGTATCCACTATCTAACACTTAGGTAGAGAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCAT 1826
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1827 TCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAGGTTTCTGCTCAACCTGGGATCTGGAGGGAGAGCTTTGAT 1900
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1901 GTTGGTAAATCTGCCTTGAATTCATTGGTTTAACTTGCATCAAAATACCATGTGAGTGTGCTCATTCTCATATA 1974
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1975 TCCCCTACCACCATCACCACCATTCTGCTGTTCAGTGTCTCTTGAGAGAGCCTCTTTGCATGTTTTCCAGAATC 2048
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2049 TGTGTGTGTTTTTCCTTTCTTCTCCTTTGTTCTTTTTGCTCAAAGGTGTGACCAGTCATTGCCCCTCTGGGGCT 2122
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2123 TTCATTCTCCAGGAGAAACATCCCAGAACCAGCACTGTTTAGCCTGATACCTTTCTAATGTCCATGTCAATTTT 2196
Query 1303 ------------------------- 1302
Sbjct 2197 CAATAAAATTCAAAGAAATGCTAAA 2221
