Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15819
Subject:
XR_385390.3
Aligned Length:
3163
Identities:
779
Gaps:
2349

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCCTCTGCTGGCGCTAAACCCCGGAGAGCGGAGCGTGCACGCTGAGCCTCCTCGGCGGGCCCGGCCGCGGCGC  74

Query    1  -------------------------------------------------------ATGTCCAACCGAGTGGTCT  19
                                                                   |||||||||||||||||||
Sbjct   75  TGGGCATGCTCAGTGGGCCGGCCCCGGTAGAGCGGCGAGCGGCACAGGCACCAAGATGTCCAACCGAGTGGTCT  148

Query   20  GCCGAGAAGCCAGTCACGCCGGGAGCTGGTACACAGCCTCAGGACCGCAGCTGAATGCACAGCTAGAAGGTTGG  93
            ||||.||||||||.||||||||||||||||||||.|||||||||||.||||||||.||.|||||.|||||||||
Sbjct  149  GCCGGGAAGCCAGCCACGCCGGGAGCTGGTACACCGCCTCAGGACCTCAGCTGAACGCTCAGCTGGAAGGTTGG  222

Query   94  CTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGCCATTATTGCCCCCCATGCAGGATATACGTACTGTGG  167
            ||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||.||.||||||||
Sbjct  223  CTTTCACAAGTACAGTCTACGAAAAGACCTGCTAGAGCCATTATTGCACCCCATGCGGGATACACATACTGTGG  296

Query  168  GTCTTGTGCTGCCCATGCTTATAAACAAGTGGATCCGTCTATTACCCGGAGAATTTTCATCCTTGGGCCTTCTC  241
            |||.|||||||||||||||||.||||||||||||||.|||.|||||||||||||||||||||||||||||||.|
Sbjct  297  GTCCTGTGCTGCCCATGCTTACAAACAAGTGGATCCATCTGTTACCCGGAGAATTTTCATCCTTGGGCCTTCCC  370

Query  242  ATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTGGATATATATAGGACACCTCTGTATGACCTTCGTATT  315
            |||||||||||||.||||||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||
Sbjct  371  ATCATGTGCCCCTGTCTCGATGTGCACTCTCCAGTGTGGATATATATAGGACTCCTCTGTATGATCTTCGTATT  444

Query  316  GACCAAAAGATTTACGGAGAACTGTGGAAGACAGGAATGTTTGAACGCATGTCTCTGCAGACAGATGAAGATGA  389
            ||||||||||||||||||||.||.|||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct  445  GACCAAAAGATTTACGGAGAGCTATGGAAGACAGGAATGTTTGAACGAATGTCTCTGCAGACAGATGAAGATGA  518

Query  390  ACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAGCCATGGAAAGCCATAAGGATGAGTTTACCATTATTC  463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct  519  ACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAGCCATGGAAAGCCATAAAGATGAGTTTACCATTATTC  592

Query  464  CTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGAT  537
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGAT  666

Query  538  CCTAGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCATTGGGGTCAAAGGTTCCGTTACAGTTACTATGATGA  611
            ||||||||||||||||||||||||||||||||||||||.|||                                
Sbjct  667  CCTAGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCACTGG--------------------------------  708

Query  612  ATCCCAGGGGGAGATTTATAGATCCATTGAACATCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGACC  685
                                                         |||||||||||||||||||||||||||.|
Sbjct  709  ---------------------------------------------GGGTATGAGTATTATAGAACAATTAGATC  737

Query  686  CTGTATCTTTTAGCAATTACTTGAAGAAATACCATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTA  759
            |||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  738  CTGTATCTTTTAGCAATTATTTGAAGAAATATCATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTA  811

Query  760  AATGCTATCACAGAGCTCCAGAAGAATGGAATGAATATGAGTTTTTCGTTTTTGAATTATGCCCAGTCGAGCCA  833
            |||||||||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||||||||
Sbjct  812  AATGCTATCACAGAGCTTCAGAAGAATGGAATGAATATGAGCTTTTCCTTTTTGAATTATGCCCAGTCGAGCCA  885

Query  834  GTGTAGAAACTGGCAAGACAGTTCAGTGAGTTATGCAGCTGGAGCACTCACGGTCCAC----------------  891
            ||||||||.||||||||||||||||||.|||||.||||||||||||||||||||||||                
Sbjct  886  GTGTAGAAGCTGGCAAGACAGTTCAGTCAGTTACGCAGCTGGAGCACTCACGGTCCACTGAAGCTCCGATCCTC  959

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct  960  AGGGACACCACCTGCACAGACTCGTACTCTGTCCAGGGTCCAGCCTAGCCTTTACCAAGATGTTGGTTCTGGTG  1033

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1034  TGGGGGGATTCTGAAACCTCAGACTAATAGAACTCTCTTCTTCTTTTCTAGTAGGTGTAGTCCTCCTTAATTTC  1107

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1108  AACTCATTTTAAAAATGCTTTCTAGTTTGAGGCAGTGGAAGGAAGGCTGGAATCAAAATATTTGCCCAAATTGG  1181

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1182  CACACAGTGACTTGTAAAGCATTTAGCATATCTGAAATTTGCACTCTTTGCAGACTCATGCACATATATTCCGC  1255

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1256  TTTCAGAATAGTTTTGCAAATTGTACACAGACAAAGGGTGGAAGCTTTTTAATAAAAGAAACTGCATTTATAAA  1329

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1330  TGATCTGTATTAGAATATAAGAAATCTCCAGTTATAGACAATTACTACCCATGTTGTACAACAGATACCTTCTA  1403

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1404  TTTTAGTTGCTAATAAAGGGCTACACAACTCAAAATAGTCTGATTTAAACTTATTGCTTTGTGGTATAAATGGA  1477

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1478  AATTGTTTTTTATTAATTCTATCTCAGAATTTTTGTTAAAATGGCAAGCCTCAGCTTCGATGTAATAATGTTAA  1551

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1552  AATTATTTTATTTTTACATTTATGTGATTTTTTTTTAAATCACAGAAATTATAGTCATATTTTAAAGTTAACTT  1625

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1626  TCAAAACTATAGTCATTGCATTTTTGTGTGTGACATACCCTCATGTCATTATTATATTGTACTACAATATAAAT  1699

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1700  TCAAGGATGCTTTAAAAACAAGTAGATTTATTCCTTTCCTCCAATGACTGTGTTCGGTAGTCTGCACATGAAGA  1773

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1774  TATTGAAGAGTGTCATTAGTTGTGTTTCAAGTTGTTGCAGACCATCACCACTATGGTTTTTTGTTTGTTTGTTT  1847

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1848  GTTTTTATTGCTTTAAGCAATTTAACTCTTTCACTTGAATTTTTAGCAAGAAATCATTAACAATATTAGTAACA  1921

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1922  AGGCCTATTGGACTTCTGATAGTCCTGCAAAAAATTTGTTTGGGGAGGGCATGATTTTTGGTGCGGCTCTTCCA  1995

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1996  ACTAAAATAATGGTATGGTGTTGTATTTCTTTATCATAGATTTATTCTAGTCATTTTGGGGAGGAAAGTGTTAA  2069

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2070  CTCATTAAGCCATCATGCATGTTGTTCATCATCCCTGTTTTACCAACACTGGATGTTTCTATAACATTGGAGAG  2143

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2144  TGTTAGTCTTCAGTGTTATACCCAAGTAGCACAAGCTTTAGATGCCTTGCACCAATTTTCTTTTGGAGATTTAC  2217

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2218  GTTTCTTACTTATTAAATACCAATTTTCTATTCTCAAGAATGGGAGAAAATAATACTACCTTTTAGATTTAAAA  2291

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2292  TTTACCTACTTATACATGTAGGAAATATACTCTTATACATCAGTGTTTTATTTTCCATTATTTAGATACGCTTT  2365

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2366  TGAGTACTATAAATATTTATTTCTTGTTTAATACAGATTATAAAAATTTCTGAATTGACAATAGTGAATTTTTA  2439

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2440  AAATAATGTTTTCTGAGTATAGAATTTGAAAATACTGAAAAGTCAGAAGAAAAAATCTATTACCTACAATCTCA  2513

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2514  CTACTCCAGAGATAACACTGTTAAATGTTTTTCTGTATTTACTTGTAGTCCTTGTGTTTTTTATGAGTGTGTAT  2587

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2588  GTGTGTGTGTGTGTGTGTGCAACAACAGAATTGAGATTATAGTGCCCATACATTTGCGTTATGCCCTGTTATCC  2661

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2662  TAAGTATCTACTACCTGTGTCTCTGAAAGCACTATTTTAAAAATGCCTGCCTAATATGCTATACTGTATGAAAA  2735

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2736  TAGTTCTCTCTTTGGATGTTAGGCTGTTTCTAATTTTCCTCAATTTTATAATGGTACGGACATTCTGTGTAAAT  2809

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2810  TAGACCCAGTCTCTAGGATATAATCATGAAAATGAAATAAATGGTTTACATGATAATTTTGTAGGCCCTTTAAA  2883

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2884  AGTATGCCAAATTATATTTTCAATAGATTGTATCAAATTAACAGCACCCCCACATCAGCATCGTTTCTTTTAAT  2957

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2958  TTTTGAAAAATTGTTAAGCAAGTAATTGTTTCTTTTTTAAAGACTTTCTTTCGAATTAGTCATTTATTGTCTTT  3031

Query  892  -------------------------------------------------------  891
                                                                   
Sbjct 3032  TATAAATTTAGAATGTTTTTTTTGAAAAACAACATTAAAGAGACGTCTAGTTCTA  3086

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