Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15819
Subject:
XR_876587.2
Aligned Length:
3382
Identities:
639
Gaps:
2716

Alignment

Query    1  -----------------ATGTCCAACCGAGTGGTCTGCCGAGAAGCCAGTCACGCCGGGAGCTGGTACACAGCC  57
                             |||||||||||||||||||||||.||||||||.||||||||||||||||||||.|||
Sbjct    1  GCGGCACAGGCACCAAGATGTCCAACCGAGTGGTCTGCCGGGAAGCCAGCCACGCCGGGAGCTGGTACACCGCC  74

Query   58  TCAGGACCGCAGCTGAATGCACAGCTAGAAGGTTGGCTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGC  131
            ||||||||.||||||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct   75  TCAGGACCTCAGCTGAACGCTCAGCTGGAAGGTTGGCTTTCACAAGTACAGTCTACGAAAAGACCTGCTAGAGC  148

Query  132  CATTATTGCCCCCCATGCAGGATATACGTACTGTGGGTCTTGTGCTGCCCATGCTTATAAACAAGTGGATCCGT  205
            |||||||||.||||||||.|||||.||.|||||||||||.|||||||||||||||||.||||||||||||||.|
Sbjct  149  CATTATTGCACCCCATGCGGGATACACATACTGTGGGTCCTGTGCTGCCCATGCTTACAAACAAGTGGATCCAT  222

Query  206  CTATTACCCGGAGAATTTTCATCCTTGGGCCTTCTCATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTG  279
            ||.||||                                                                   
Sbjct  223  CTGTTAC-------------------------------------------------------------------  229

Query  280  GATATATATAGGACACCTCTGTATGACCTTCGTATTGACCAAAAGATTTACGGAGAACTGTGGAAGACAGGAAT  353
                                                                                      
Sbjct  230  --------------------------------------------------------------------------  229

Query  354  GTTTGAACGCATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACAGCTAAAG  427
                                                                                      
Sbjct  230  --------------------------------------------------------------------------  229

Query  428  CCATGGAAAGCCATAAGGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAG  501
                      ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  230  ----------CCATAAAGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGTCAAAAGAACAG  293

Query  502  GAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCA  575
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  294  GAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTCTTCTGATTTCTGCCA  367

Query  576  TTGG----------------------------------------------------------------------  579
            .|||                                                                      
Sbjct  368  CTGGGTGGTTTACAGATCAGTTCCAATCAATTTACTAAAAAGCGTGCTCTGGAATGGATTCACAAATGAGCTAC  441

Query  580  --------------------------------------------------------------------------  579
                                                                                      
Sbjct  442  CCTCCTTCCCTCAAAGAGTAAGGTTTCTGCTTTACAGGATTTTTTTTTCCTTGGGTTATTTTTCCTCTCATCTT  515

Query  580  --------------------------------------------------------------------------  579
                                                                                      
Sbjct  516  TTGAATTTGAAAAGAACTGAGGGAAGGCACCTGAAGAAACCACTGATACACTCACTAGGGAGTTGCAGAGCTTG  589

Query  580  --------------------------------------------------------------------------  579
                                                                                      
Sbjct  590  TCCCGCCCCTAGGGCGGAGTCCATGCTCCTAAAGCTAAAGCTCACACTTGAAGTGGAAACAGGGGCTCAGAGAA  663

Query  580  ---------------------------------------GGTCAAAGGTTCCGTTACAGTTACTATGATGAATC  614
                                                   |||||||||||||||||||||||||||||||||||
Sbjct  664  TCCATTTTCCCAGTGTGCCTTCTGAAAGGATAAGTCTCAGGTCAAAGGTTCCGTTACAGTTACTATGATGAATC  737

Query  615  CCAGGGGGAGATTTATAGATCCATTGAACATCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGACCCTG  688
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  738  CCAGGGGGAGATTTATAGATCCATTGAACATCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGATCCTG  811

Query  689  TATCTTTTAGCAATTACTTGAAGAAATACCATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAAT  762
            ||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  812  TATCTTTTAGCAATTATTTGAAGAAATATCATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAAT  885

Query  763  GCTATCACAGAGCTCCAGAAGAATGGAATGAATATGAGTTTTTCGTTTTTGAATTATGCCCAGTCGAGCCAGTG  836
            ||||||||||||||.|||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||
Sbjct  886  GCTATCACAGAGCTTCAGAAGAATGGAATGAATATGAGCTTTTCCTTTTTGAATTATGCCCAGTCGAGCCAGTG  959

Query  837  TAGAAACTGGCAAGACAGTTCAGTGAGTTATGCAGCTGGAGCACTCACGGTCCAC-------------------  891
            |||||.||||||||||||||||||.|||||.||||||||||||||||||||||||                   
Sbjct  960  TAGAAGCTGGCAAGACAGTTCAGTCAGTTACGCAGCTGGAGCACTCACGGTCCACTGAAGCTCCGATCCTCAGG  1033

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1034  GACACCACCTGCACAGACTCGTACTCTGTCCAGGGTCCAGCCTAGCCTTTACCAAGATGTTGGTTCTGGTGTGG  1107

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1108  GGGGATTCTGAAACCTCAGACTAATAGAACTCTCTTCTTCTTTTCTAGTAGGTGTAGTCCTCCTTAATTTCAAC  1181

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1182  TCATTTTAAAAATGCTTTCTAGTTTGAGGCAGTGGAAGGAAGGCTGGAATCAAAATATTTGCCCAAATTGGCAC  1255

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1256  ACAGTGACTTGTAAAGCATTTAGCATATCTGAAATTTGCACTCTTTGCAGACTCATGCACATATATTCCGCTTT  1329

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1330  CAGAATAGTTTTGCAAATTGTACACAGACAAAGGGTGGAAGCTTTTTAATAAAAGAAACTGCATTTATAAATGA  1403

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1404  TCTGTATTAGAATATAAGAAATCTCCAGTTATAGACAATTACTACCCATGTTGTACAACAGATACCTTCTATTT  1477

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1478  TAGTTGCTAATAAAGGGCTACACAACTCAAAATAGTCTGATTTAAACTTATTGCTTTGTGGTATAAATGGAAAT  1551

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1552  TGTTTTTTATTAATTCTATCTCAGAATTTTTGTTAAAATGGCAAGCCTCAGCTTCGATGTAATAATGTTAAAAT  1625

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1626  TATTTTATTTTTACATTTATGTGATTTTTTTTTAAATCACAGAAATTATAGTCATATTTTAAAGTTAACTTTCA  1699

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1700  AAACTATAGTCATTGCATTTTTGTGTGTGACATACCCTCATGTCATTATTATATTGTACTACAATATAAATTCA  1773

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1774  AGGATGCTTTAAAAACAAGTAGATTTATTCCTTTCCTCCAATGACTGTGTTCGGTAGTCTGCACATGAAGATAT  1847

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1848  TGAAGAGTGTCATTAGTTGTGTTTCAAGTTGTTGCAGACCATCACCACTATGGTTTTTTGTTTGTTTGTTTGTT  1921

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1922  TTTATTGCTTTAAGCAATTTAACTCTTTCACTTGAATTTTTAGCAAGAAATCATTAACAATATTAGTAACAAGG  1995

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 1996  CCTATTGGACTTCTGATAGTCCTGCAAAAAATTTGTTTGGGGAGGGCATGATTTTTGGTGCGGCTCTTCCAACT  2069

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2070  AAAATAATGGTATGGTGTTGTATTTCTTTATCATAGATTTATTCTAGTCATTTTGGGGAGGAAAGTGTTAACTC  2143

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2144  ATTAAGCCATCATGCATGTTGTTCATCATCCCTGTTTTACCAACACTGGATGTTTCTATAACATTGGAGAGTGT  2217

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2218  TAGTCTTCAGTGTTATACCCAAGTAGCACAAGCTTTAGATGCCTTGCACCAATTTTCTTTTGGAGATTTACGTT  2291

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2292  TCTTACTTATTAAATACCAATTTTCTATTCTCAAGAATGGGAGAAAATAATACTACCTTTTAGATTTAAAATTT  2365

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2366  ACCTACTTATACATGTAGGAAATATACTCTTATACATCAGTGTTTTATTTTCCATTATTTAGATACGCTTTTGA  2439

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2440  GTACTATAAATATTTATTTCTTGTTTAATACAGATTATAAAAATTTCTGAATTGACAATAGTGAATTTTTAAAA  2513

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2514  TAATGTTTTCTGAGTATAGAATTTGAAAATACTGAAAAGTCAGAAGAAAAAATCTATTACCTACAATCTCACTA  2587

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2588  CTCCAGAGATAACACTGTTAAATGTTTTTCTGTATTTACTTGTAGTCCTTGTGTTTTTTATGAGTGTGTATGTG  2661

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2662  TGTGTGTGTGTGTGTGCAACAACAGAATTGAGATTATAGTGCCCATACATTTGCGTTATGCCCTGTTATCCTAA  2735

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2736  GTATCTACTACCTGTGTCTCTGAAAGCACTATTTTAAAAATGCCTGCCTAATATGCTATACTGTATGAAAATAG  2809

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2810  TTCTCTCTTTGGATGTTAGGCTGTTTCTAATTTTCCTCAATTTTATAATGGTACGGACATTCTGTGTAAATTAG  2883

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2884  ACCCAGTCTCTAGGATATAATCATGAAAATGAAATAAATGGTTTACATGATAATTTTGTAGGCCCTTTAAAAGT  2957

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 2958  ATGCCAAATTATATTTTCAATAGATTGTATCAAATTAACAGCACCCCCACATCAGCATCGTTTCTTTTAATTTT  3031

Query  892  --------------------------------------------------------------------------  891
                                                                                      
Sbjct 3032  TGAAAAATTGTTAAGCAAGTAATTGTTTCTTTTTTAAAGACTTTCTTTCGAATTAGTCATTTATTGTCTTTTAT  3105

Query  892  ----------------------------------------------------  891
                                                                
Sbjct 3106  AAATTTAGAATGTTTTTTTTGAAAAACAACATTAAAGAGACGTCTAGTTCTA  3157

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