Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15832
• Subject: XM_006519506.3
• Aligned Length: 2184
• Identities: 1712
• Gaps: 165

Alignment

Query    1  ATGGAGGGCTCACGTCCCCGCGCCCCGAGCGGCCACTTAGCGCCGTCGCCGCCGGCTTTCGACGGCGAGCTGGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TCTGCAGCGATACTCCAACGGGCCAGCCGTGAGCGCAGGGTCGCTCGGGATGGGAGCGGTGAGCTGGTCTGAGA  148
                                                             ||||||||.|||.|.||||||||||
Sbjct    1  -------------------------------------------------ATGGGAGCAGTGGGTTGGTCTGAGA  25

Query  149  GTCGTGCAGGCGAACGGCGCTTCCCCTGCCCTGTATGCGGGAAGCGCTTCCGCTTCAACTCTATCCTTGCTTTG  222
            .||||||||||||||||||||||||.||.|||||.|||||.|||||||||||.|||||.||.|||.|.||||||
Sbjct   26  CTCGTGCAGGCGAACGGCGCTTCCCTTGTCCTGTGTGCGGAAAGCGCTTCCGATTCAATTCCATCTTGGCTTTG  99

Query  223  CACCTGCGGGCGCACCCAGGAGCCCAGGCCTTCCAGTGCCCTCACTGCGGCCACCGCGCGGCGCAGCGGGCTCT  296
            ||||||.|.||.|||||.||.|||||.||||||||||||||.||.||||||||||||||.||||||||||||||
Sbjct  100  CACCTGAGAGCCCACCCGGGCGCCCAAGCCTTCCAGTGCCCACATTGCGGCCACCGCGCAGCGCAGCGGGCTCT  173

Query  297  GCTGCGCTCGCACCTGCGCACACACCAGCCCGAGCGCCCACGTAGTCCTGCTGCACGCCTGTTGCTGGAGTTGG  370
            |||||||||.|||||.||.||.||||||||.|||||.|||||.||.|||||||||||.||||||||||||||||
Sbjct  174  GCTGCGCTCACACCTCCGAACGCACCAGCCGGAGCGTCCACGCAGCCCTGCTGCACGGCTGTTGCTGGAGTTGG  247

Query  371  AAGAGCGCGCGCTACTACGCGAGGCCCGACTGGGGAGAGCCCGAAGCTCAGGGGGCATGCAGGCCACCCCTGCC  444
            |.||.|||||.||.||.|||||.||||||||.|||||||||.||||||||||.|||||||||.|||.|||||||
Sbjct  248  AGGAACGCGCCCTGCTTCGCGAAGCCCGACTCGGGAGAGCCAGAAGCTCAGGCGGCATGCAGTCCAGCCCTGCC  321

Query  445  ACTGAGGGTCTGGCGCGGCCCCAGGCTCCTTCATCGTCCGCCTTCCGTTGCCCCTACTGCAAAGGCAAGTTTCG  518
            .|.|||||.|||||.||.||.||||..|||||.||.||.||||||||||||||.|.||||||||||||||||||
Sbjct  322  GCAGAGGGCCTGGCTCGCCCTCAGGTCCCTTCCTCATCTGCCTTCCGTTGCCCTTTCTGCAAAGGCAAGTTTCG  395

Query  519  CACCTCGGCGGAGCGCGAACGCCACCTGCACATCCTGCATAGGCCCTGGAAGTGCGGCCTGTGCAGTTTCGGCT  592
            ||||||.||||||||.||||||||||||||.||||||||.|||||||||||||||.||.||||||||||.||||
Sbjct  396  CACCTCAGCGGAGCGGGAACGCCACCTGCATATCCTGCACAGGCCCTGGAAGTGCAGCTTGTGCAGTTTTGGCT  469

Query  593  CCAGCCAGGAGGAGGAGCTGCTGCACCACAGCCTGACGGCCCACGGGGCTCCCGAGCGTCCCCTGGCGGCCACC  666
            |||||||||||||||||.|||||||||||||.||||||||||||||||||.|||||||.|||||||||||.||.
Sbjct  470  CCAGCCAGGAGGAGGAGTTGCTGCACCACAGTCTGACGGCCCACGGGGCTTCCGAGCGCCCCCTGGCGGCTACA  543

Query  667  TCCGCTGCGCCTCCGCCTCAGCCTCAGCCTCCACCCCAGCCCGAACCCAGATCAGTTCCCC---AGCCGGAGCC  737
            |         ||.|||||.|.||.|.||||||||||||||..|||||||||||   |.|||   ||||.|||||
Sbjct  544  T---------CTACGCCTGAACCCCCGCCTCCACCCCAGCAAGAACCCAGATC---TGCCCTTGAGCCTGAGCC  605

Query  738  GGA------------GCCGGAGCCCGAACGTGAGGCAACCCCGACCCCAGCTCCTGCCGCTCCCGAGGAGCCCC  799
            .||            |||.|||||.||.||.|||||||.|||..|||||.|||||||..||||.||||||||||
Sbjct  606  TGAGCCTGAACCTAGGCCAGAGCCTGACCGGGAGGCAAACCCTGCCCCAACTCCTGCACCTCCGGAGGAGCCCC  679

Query  800  CAGCGCCTCCGGAGTTCCGCTGCCAAGTGTGCGGCCAGAGCTTTACACAGTCTTGGTTTCTCAAGGGCCACATG  873
            |.|||||.||.||.|||||.|||||.||||||||||||||||||||||||||.||||||||||||||.||||||
Sbjct  680  CTGCGCCACCTGAATTCCGTTGCCAGGTGTGCGGCCAGAGCTTTACACAGTCCTGGTTTCTCAAGGGTCACATG  753

Query  874  CGTAAGCACAAGGCCTCCTTCGATCATGCGTGTCCGGTGTGCGGCCGCTGCTTCAAGGAGCCCTGGTTCCTTAA  947
            ||.|||||||||||||||||.|||||||||||.||.||.||.||.|||||||||||||||||||||||||||||
Sbjct  754  CGCAAGCACAAGGCCTCCTTTGATCATGCGTGCCCCGTATGTGGTCGCTGCTTCAAGGAGCCCTGGTTCCTTAA  827

Query  948  GAACCACATGAAGGTGCACGCCAGCAAGCTGGGCCCACTGCGTGCCCCGGGGCCTGCCTCCGGGCCTGCCCGCG  1021
            |||||||||||||||||||.|||||||||||||.||..|||||||.||.||.||||.|||.|..||||||.|.|
Sbjct  828  GAACCACATGAAGGTGCACACCAGCAAGCTGGGTCCTTTGCGTGCTCCAGGCCCTGGCTCTGCACCTGCCAGGG  901

Query 1022  CCCCCCAGCCTCCTGACCTCGGCCTGCTGGCCTATGAGCCGTTGGGCCCAGCGCTCCTCTTGGCCCCGGCTCCC  1095
            ||||.||||||||.|||||..||||.|||||.||||||||..|||||||.||.||||||.|||||||.||.|||
Sbjct  902  CCCCTCAGCCTCCCGACCTGAGCCTACTGGCATATGAGCCACTGGGCCCTGCACTCCTCCTGGCCCCAGCACCC  975

Query 1096  ACCCCGGCCGAGCGCCGTGAGCCCCCGAGCCTCTTGGGCTACCTGAGCCTGCGAGCTGGCGAGGGCCGGCCCAA  1169
            .|.|||||.||||||||.||||||||.||||||||.|||||||||||..|.||||||||.||.|..||.|||||
Sbjct  976  GCTCCGGCTGAGCGCCGAGAGCCCCCAAGCCTCTTAGGCTACCTGAGTGTACGAGCTGGGGAAGTACGACCCAA  1049

Query 1170  CGGCGAGGGTGCTGAGCCC----GGTCCCGGCCGCAGCTTCGGAGGCTTCCGCCCGCTGTCCTCTGCTCTCCCG  1239
            .||.||||||||||| |||    |||   |||||.||||..|||||.||||||||.|||.|.||.|||||.||.
Sbjct 1050  TGGTGAGGGTGCTGA-CCCTGGAGGT---GGCCGAAGCTATGGAGGGTTCCGCCCACTGCCTTCAGCTCTTCCC  1119

Query 1240  GCCCGGGCTCGCCGGCACCGTGCGGAGGAGCCTGAGGAAGAAGAGGAGGTGGTGGAGGCCGAGGAGGAAACCTG  1313
            ..|||||||||.||.||||||.|.|||||.||.||.||.|||||.||.|||||||||||.||.|||||.|.|||
Sbjct 1120  AACCGGGCTCGGCGACACCGTACAGAGGAACCAGAAGAGGAAGAAGAAGTGGTGGAGGCTGAAGAGGAGAGCTG  1193

Query 1314  GGCCCGGGGCAGGTCGCTGGGCTCTCTGGCTTCCCTGCACCCGCGCCCGGGTGAGGGACCGGGGCACTCTGCCT  1387
            ||||||.|||||||||||||||||||||.|||||||||||||...|||.||||||||..|.||.||..||||..
Sbjct 1194  GGCCCGAGGCAGGTCGCTGGGCTCTCTGACTTCCCTGCACCCCAACCCAGGTGAGGGGTCAGGACAGCCTGCAC  1267

Query 1388  CTGCTGCTGGGGCCCAGGCAAGATCGACCGCCACGCAGGAAGAGAATGGGCTGTTGGTTGGAGGGACCCGGCCT  1461
            ||||.||.|||.|||||||.|||||.||.|||||.||.|||||.||.||||||.|||||||||||||.||..||
Sbjct 1268  CTGCCGCGGGGACCCAGGCGAGATCCACGGCCACCCAAGAAGAAAACGGGCTGCTGGTTGGAGGGACACGATCT  1341

Query 1462  GAAGGGGGCCGGGGCGCCACCGGCAAGGATTGTCCTTTCTGCGGAAAATCTTTCCGCTCAGCACATCACCTCAA  1535
            ||||.||||||.||.|||||.||||||||.||.||.|||||.|||||||||||||||||.||.||||||.|.||
Sbjct 1342  GAAGCGGGCCGTGGGGCCACTGGCAAGGACTGCCCCTTCTGTGGAAAATCTTTCCGCTCGGCGCATCACTTAAA  1415

Query 1536  AGTGCATCTGCGAGTGCACACAGGCGAGCGGCCCTACAAGTGTCCGCACTGCGACTACGCGGGCACCCAGTCCG  1609
            |||||||||.||.|||||||||||.|||||.||||||||||||||.|||||||||||.||.||.||||||||.|
Sbjct 1416  AGTGCATCTCCGTGTGCACACAGGTGAGCGTCCCTACAAGTGTCCACACTGCGACTATGCAGGTACCCAGTCGG  1489

Query 1610  GCTCGCTCAAGTATCACCTACAGCGCCACCACCGGGAGCAGAGGAGCGGGGCCGGCCCCGGGCCACCCCCGGAG  1683
            |||||||||||||||||||.|||||.||||||||.||||||||||||.|.||.||.||.|||||.|||||.||.
Sbjct 1490  GCTCGCTCAAGTATCACCTTCAGCGTCACCACCGAGAGCAGAGGAGCAGTGCGGGTCCTGGGCCTCCCCCAGAA  1563

Query 1684  CCACCGCCTCCTTCCCAGCGGGGTTC---GGCCCCGCAATCTGGAGCCAAGCCGTCTCCGCAGCCT--GCGACC  1752
            ||.|||||.||||||||||||||.||   |...|||||.||.|||||||||||..|||.|  ||||  ||.|||
Sbjct 1564  CCCCCGCCACCTTCCCAGCGGGGCTCACTGCAGCCGCAGTCAGGAGCCAAGCCAACTCAG--GCCTCAGCCACC  1635

Query 1753  TGGGTGGAGGGCGCCTCAAGTCCCCGGCCTCCTTCTAGCGGTGCTGGGCCGGGGTCCCGTCGGAAGCCCGCCAG  1826
            |||||.||||||.|..|||||.|||||||||||||.|||.|..|.||.||.|||||||||.|||||||.||.||
Sbjct 1636  TGGGTAGAGGGCACTGCAAGTACCCGGCCTCCTTCGAGCAGCACCGGACCAGGGTCCCGTAGGAAGCCTGCTAG  1709

Query 1827  CCCTGGGAGGACCCTGCGCAACGGGCGAGGCGGTGAGGCCGAACCCCTGGACCTGTCCTTGCGGGCAGGGCCGG  1900
            ||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||.|.|||||.||.||||
Sbjct 1710  CCCTGGGAGGACCCTGCGAAACGGGCGAGGTGGTGAAGCCGAACCCCTGGACCTGTCCCTACGGGCGGGCCCGG  1783

Query 1901  GAGGCGAGGCCGGGCCTGGGGGTGCCCTCCACCGCTGCCTCTTCTGCCCGTTCGCCACTGGAGCCCCAGAGCTC  1974
            ||||.|||||||||.|.|||||||||||.||||||||||||||||||||.||.|||||||||||.||.||||||
Sbjct 1784  GAGGTGAGGCCGGGGCAGGGGGTGCCCTTCACCGCTGCCTCTTCTGCCCCTTTGCCACTGGAGCTCCTGAGCTC  1857

Query 1975  ATGGCCTTGCACCTTCAAGTGCACCACAGCCGCCGGGCTAGGGGCCGCCGGCCACCCCAGGCTGACGCGTCCCC  2048
            |||||||||||.||.|||||.|||||.|||||.||.|||.||||||||||||..||||..||.|||.||||.||
Sbjct 1858  ATGGCCTTGCATCTGCAAGTACACCATAGCCGTCGTGCTCGGGGCCGCCGGCAGCCCCGAGCCGACACGTCTCC  1931

Query 2049  GCCCTATGCCCGAGTACCATCAGGAGAGACCCCTCCCAGTCCTTCGCAGGAAGGGGAGGAGGGCTCCGGGCTGT  2122
            ..||||||.|||.|.||||||||||||||||||||||||||||.|.|..||||.|||||...||.|.|||||||
Sbjct 1932  AACCTATGTCCGGGCACCATCAGGAGAGACCCCTCCCAGTCCTCCACTAGAAGAGGAGGGCAGCCCAGGGCTGT  2005

Query 2123  CCAGACCCGGAGAGGCAGGGCTGGGGGGGCAAGAACGG  2160
            |.|||.|||||||||||||.||.|||||||||||||||
Sbjct 2006  CTAGATCCGGAGAGGCAGGTCTTGGGGGGCAAGAACGG  2043