Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15837
Subject:
NM_016625.3
Aligned Length:
1002
Identities:
828
Gaps:
174

Alignment

Query    1  ATGGGACGTCGGTCATCAGATACTGAAGAAGAAAGCAGAAGCAAGAGAAAAAAGAAACACCGTAGACGGTCCTC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGACGTCGGTCATCAGATACTGAAGAAGAAAGCAGAAGCAAGAGAAAAAAGAAACACCGTAGACGGTCCTC  74

Query   75  CTCGAGCAGTTCTTCAGATAGTAGAACATACAGCCGAAAGAAAGGAGGAAGGAAATCAAGATCAAAGTCAAGAT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTCGAGCAGTTCTTCAGATAGTAGAACATACAGCCGAAAGAAAGGAGGAAGGAAATCAAGATCAAAGTCAAGAT  148

Query  149  CTTGGTCCAGAGATCTTCAGCCTCGTTCACATTCTTATGATAGAAGACGCAGGCATCGATCAAGCAGTAGCTCT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTTGGTCCAGAGATCTTCAGCCTCGTTCACATTCTTATGATAGAAGACGCAGGCATCGATCAAGCAGTAGCTCT  222

Query  223  TCTTATGGCTCCAGAAGGAAACGAAGTCGAAGTCGTTCAAGGGGTCGAGGGAAATCCTATAGAGTTCAGAGGTC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCTTATGGCTCCAGAAGGAAACGAAGTCGAAGTCGTTCAAGGGGTCGAGGGAAATCCTATAGAGTTCAGAGGTC  296

Query  297  TAGGTCAAAAAGCAGAACAAGAA---------------------------------------------------  319
            |||||||||||||||||||||||                                                   
Sbjct  297  TAGGTCAAAAAGCAGAACAAGAAGGTCCAGGTCAAGACCTCGTCTCCGTTCTCATAGTCGTAGCAGTGAAAGGT  370

Query  320  --------------------------------------------------------------------------  319
                                                                                      
Sbjct  371  CCAGTCACAGAAGAACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAAAAGAGAA  444

Query  320  -------------------------------------------------GGGAATCTGGAAACATCAAAGCTGG  344
                                                             |||||||||||||||||||||||||
Sbjct  445  AAGGAGAAGGATAAAGGGAAGGACAAGGAATTACATAACATCAAACGTGGGGAATCTGGAAACATCAAAGCTGG  518

Query  345  ATTAGAACATCTGCCACCAGCTGAACAGGCCAAAGCCAGACTACAGCTGGTTCTTGAAGCTGCTGCAAAAGCTG  418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATTAGAACATCTGCCACCAGCTGAACAGGCCAAAGCCAGACTACAGCTGGTTCTTGAAGCTGCTGCAAAAGCTG  592

Query  419  ATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGACCAAGCCACCCTG  492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGACCAAGCCACCCTG  666

Query  493  GTAGAACAAGTAAAAAGAGTAAAAGAAATTGAAGCTATTGAAAGTGATTCTTTTGTTCAGCAGACATTCAGATC  566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GTAGAACAAGTAAAAAGAGTAAAAGAAATTGAAGCTATTGAAAGTGATTCTTTTGTTCAGCAGACATTCAGATC  740

Query  567  AAGTAAAGAAGTCAAAAAGTCAGTGGAACCTAGTGAAGTGAAACAAGCAACTTCAACATCAGGACCAGCATCAG  640
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAGTAAAGAAGTCAAAAAGTCAGTGGAACCTAGTGAAGTGAAACAAGCAACTTCAACATCAGGACCAGCATCAG  814

Query  641  CAGTTGCTGATCCACCCAGTACTGAAAAAGAAATAGATCCTACCAGCATCCCTACTGCTATCAAGTACCAAGAT  714
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAGTTGCTGATCCACCCAGTACTGAAAAAGAAATAGATCCTACCAGCATCCCTACTGCTATCAAGTACCAAGAT  888

Query  715  GACAATTCCCTGGCCCATCCAAATTTATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAAT  788
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GACAATTCCCTGGCCCATCCAAATTTATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAAT  962

Query  789  TGCTCTCCGACAAGAAAGACTAATGGGCAGTCCTGTGGCC  828
            ||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGCTCTCCGACAAGAAAGACTAATGGGCAGTCCTGTGGCC  1002