Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15879
- Subject:
- XR_381536.2
- Aligned Length:
- 2405
- Identities:
- 926
- Gaps:
- 1381
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGCGCGCACGCGCTAAATGCCCAAGCGAAGAAGTCACGCAGGCTTCTTCTGGCCTTTAGAAATCCGGCTTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGCTGCGACACCTCCCCAAGGCTTCCGCCCGTGCCCAAGATGGCGTCCAGGCGTCCTAATTAACTTCCACCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCTTGGCGAAGTCTGACGTCGCGGCTGGCAGTGGGTGGAGCTCTTAACAAACTGCAAATGTAGGGTCCTCTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGGGAGTCAACCATGGACTGGAAAGACGTGCTTCGCCGGCGGTTAGCGTCGCCCAACACGGATCCAAAGAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAAAAGCGAACAAGAATTAAAAGATGAAGAAATGGATTTATTTACCAAATACTACTCAGAGTGGAAAGGAGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGAAAAAACACAAACGAGTTCTATAAGACCATACCCCGGTTTTATTACAGGTTGCCAGCTGAAGATGAAGTCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTACAGAAATTACGAGAGGAATCTAGAGCTGTCTTTCTACAGAGGAAAAGCAGAGAACTCTTAGATAACGAAG 518
Query 1 -----------------------------------------------ATGATTGGAGAGGAAGCGATGATCAAT 27
|||||||||||||||||.|||||||||
Sbjct 519 AGTTGCAGAACTTATGGTTTTTGCTGGATAAACACCAGATACCACCTATGATTGGAGAGGAAGCAATGATCAAT 592
Query 28 TACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGC 101
||.|||||.|||||||||||||||||||||||||||.|||||||||||||||||||.||.||||||||||||||
Sbjct 593 TATGAAAATTTTTTGAAGGTTGGTGAAAAGGCTGGACCAAAGTGCAAGCAATTTTTTACTGCAAAAGTCTTTGC 666
Query 102 TAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGAAAAGTTT 175
.|||||||||||||||||||||||||||.|||||||||||||||||||||||||.||.||||||.|||||||||
Sbjct 667 CAAACTCCTTCATACAGATTCATATGGACGAATTTCCATCATGCAGTTCTTTAACTACGTCATGCGAAAAGTTT 740
Query 176 GGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTA 249
||||.|||||.|||||||||||||||||||||||||||||.|||||.||.||.||||||||||||||.||..|.
Sbjct 741 GGCTGCATCAGACAAGAATAGGACTCAGTTTATATGATGTTGCTGGCCAAGGATACCTTCGGGAATCAGACCTG 814
Query 250 GAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACTCCTTTTA 323
||.||||||||..||||.||.|||||.|||.|||||||..|.||.||.|||||.||.||.|||||||||||.||
Sbjct 815 GAGAACTACATCCTGGAGCTGATCCCGACGCTGCCACAGCTGGACGGGCTGGAGAAGTCCTTCTACTCCTTCTA 888
Query 324 TGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATTCAAGATA 397
|||.||.||.|||||.|||||||||||||||||.||.||.|||.||||||||||.|||||.|||||||||||||
Sbjct 889 TGTCTGCACTGCAGTCAGGAAGTTCTTCTTCTTCTTGGACCCTCTAAGAACAGGGAAGATCAAAATTCAAGATA 962
Query 398 TTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAACA 471
||||.||||||||.||.||||||||||||.||||||||||.|||||||||.|||||||.||.||||||||||||
Sbjct 963 TTTTGGCATGCAGTTTTCTAGATGATTTACTGGAGCTAAGAGATGAGGAATTGTCCAAAGAAAGTCAAGAAACA 1036
Query 472 AATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTTATGGCCAGTACTTGAATCTTGATAAAGATCACAATGGCAT 545
||||||||||||||||||||||||||.||.||.||| |||.||||||||||||||||||||.||||||||
Sbjct 1037 AATTGGTTTTCTGCTCCTTCTGCCCTGAGGGTCTAT-----GTATTTGAATCTTGATAAAGATCATAATGGCAT 1105
Query 546 GCTCAGTAAAGAAGAACTCTCACGCTATGGAACAGCTACCATGACCAATGTCTTCTTAGACCGTGTTTTCCAGG 619
|||.||||||||.||.|||||.||.||.||||||||.||||||||||||||||||||||||||.||||||||||
Sbjct 1106 GCTAAGTAAAGAGGAGCTCTCCCGTTACGGAACAGCAACCATGACCAATGTCTTCTTAGACCGAGTTTTCCAGG 1179
Query 620 AGTGTCTCACTTATGATGGAGAAATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAACAGAAAG 693
|||||||||||||.|||||||||||||||||||||||||||.||||||||||.|||||.|||||||||||||||
Sbjct 1180 AGTGTCTCACTTACGATGGAGAAATGGACTATAAGACCTACCTGGACTTTGTTCTTGCCTTAGAAAACAGAAAG 1253
Query 694 GAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCTTTTCACT 767
||.|||||||||||.||.||.||||||||||||||.||.|||||||||||.||||||||||||||||||||.||
Sbjct 1254 GAGCCTGCAGCTCTGCAGTACATTTTCAAACTGCTGGACATTGAGAACAAGGGATACCTGAATGTCTTTTCCCT 1327
Query 768 TAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAAGATGTCA 841
||||||||||||||||||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||||
Sbjct 1328 TAATTATTTCTTTAGGGCCATACAAGAACTAATGAAAATCCATGGACAGGATCCTGTGTCATTTCAAGATGTCA 1401
Query 842 AGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAACAGTAAT 915
||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1402 AGGATGAAATCTTTGACATGGTCAAACCAAAGGATCCTTTGAAAATCTCACTTCAGGATTTAATCAACAGTAAT 1475
Query 916 CAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGT 989
||||||||||||||.||.|||||||||||.|||.|.||||||||||||||.||||||||||||||.||.|||||
Sbjct 1476 CAAGGAGACACAGTCACTACCATTCTAATTGATCTCAATGGCTTCTGGACCTACGAGAACAGAGAAGCCCTTGT 1549
Query 990 TGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACA---------------------------------- 1029
|||||||||||..||.|||||||||||.||||||||.|||
Sbjct 1550 TGCAAATGACAACGAGAACTCTGCAGATCTTGATGACACATGATCTCTGCAAAATAGACTTCTTCATAAAGATG 1623
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1624 CTTGAATGCTGCATGCAACACTGTTGAAGCAGAATCCTTAGAAACGTTCTAAATAAAACTCATCACATGCCTGT 1697
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1698 ACAACACAGCAAATATCTTGCTTACTAGAGTGTTGGTTGCAGTCAGAACAATTTGAAAGTAATAGGACCAACTA 1771
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1772 TTGGTTTTTTATTAAGTGGTAAAGTAAGTCCTAGTTCTGTCTAACTCAGAAATGGAAAGTAAGATTTGCTGTAG 1845
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1846 TTAGCCGTGGAGTTTATTCATGTGGAATTACAATATTTGTTCTTCAAGAAGATTGGGGACAGGAGACTTCCCAT 1919
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1920 CAGAGTAGCACCATTGCATTTCTGATTCAAAGCTTTAGGTGTGGCTTTGGTTGTTTTGAGACATGGTCTCACTA 1993
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1994 TGTAGCCCTGACTGGCCTGGAACTTGCTATGTGGACCAAGTTGGCCTTTAACCTTGAACTCTTAAGAGAGACAC 2067
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2068 CTGCCTCTGCCTCCCAGGTGCTGAGGTTAAAGGTGAGTGCCTCTGTGCCTATCGTTTTTGGGGTTTTTGTTGTT 2141
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2142 GTTTTTGTATTTCTTGTGTGTGCACACCAGAGCACACATGGAGGTCAGTAGACATTGTTGTGATTCTTGCCTTT 2215
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2216 CCCCACGTGGGTTCTGGAGATCAGATTCAGGTTCTCGGCTTCCCAGCAAGCGCTTGTACCCAGCATCCTCTTGC 2289
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2290 CTTCCCAAGATTTTTTTGTTTTGTTTTTTTTGTTTTTTTAAATATAGTGTTTTCAAAGAAAGTATTCAAACAAA 2363
Query 1030 ------------------------------------- 1029
Sbjct 2364 CTATTTTGTTTTATTAAACTCATCAGATTGAATGAGA 2400
