Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15888
- Subject:
- XM_006519407.3
- Aligned Length:
- 5181
- Identities:
- 854
- Gaps:
- 4263
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGAAGAAGTTGGATTCCATGGGTTCCAAGAGAAGAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAGGCCCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTATAACACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAGAAATCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGGAAGAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAGCCAGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCAGAAAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTTCTCCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGGCTCATC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACCTATAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATATAGATC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATTAAAAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGGACTGCATC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAATTTGGCTGCAGCCAGGCTGACAGGTCCTTCGCACAATAAAAGCAGCCTTGGTGAAGAAAGAAACCCCACTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAAGTATTACCGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCAGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCCATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGCAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCCTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGGCTATCCAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAAATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGGAATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAAATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAATAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AATTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTAATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CGGACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GAACAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAATGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CGGTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AAACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GAACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGA 4070
Query 1 -------------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCC 61
|||||||||||.||||||||.|||||||||.||||.|||||||||||.||.|||||.||||
Sbjct 4071 TGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCC 4144
Query 62 TGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCC 120
||||||.||||.||||||||||||||||.|||||||| ||||||||||||||||||||||
Sbjct 4145 TGGCCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCC 4218
Query 121 AAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGAT 194
|||||||||||||||||||||.|.||.|||||.|||||||||||||||||||||||..|||||||||||||.||
Sbjct 4219 AAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAAT 4292
Query 195 GAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGA 268
|||.|||||||||||.|||||.|||||||||||||||||.||||||||||||.|.|||||||||||||||||||
Sbjct 4293 GAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGA 4366
Query 269 GAAATCTTGAGACAGCCAAGAAAGCAGAATATGA---------------------------------------- 302
||||.|||||.|||||||||||||||||||||||
Sbjct 4367 GAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAG 4440
Query 303 -------------------------------------------------------------------------- 302
Sbjct 4441 CGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGT 4514
Query 303 ---------------------------------------------------AGGCATGATGGGTGGCTATCCGC 325
|||||||||||||||||||||||
Sbjct 4515 GCCACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGC 4588
Query 326 CAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGG 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 CAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGG 4662
Query 400 GGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCA 473
|||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||
Sbjct 4663 GGGCCTCCACCTCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCA 4736
Query 474 AGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGC 547
||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|
Sbjct 4737 AGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGAC 4810
Query 548 CTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACA 621
|||||||||||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||
Sbjct 4811 CTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACA 4884
Query 622 ACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGA 695
||.|||||||||||.||||||||||||||||||||..|||||||.|||||||||||||||||||||||||||||
Sbjct 4885 ACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGA 4958
Query 696 AGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATT 769
||||||||||||.||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.|||||||
Sbjct 4959 AGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATT 5032
Query 770 TGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGAT 843
||||.|||||||||||||||||||||||.|||||||||||.|||||.||||||||.||||||||||||||||||
Sbjct 5033 TGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGAT 5106
Query 844 GCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGT 917
||||||||||||||.||.|||||.|||||.||.|||||.||||||||.||.||.||||||||||||||||||||
Sbjct 5107 GCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGT 5180
Query 918 T 918
|
Sbjct 5181 T 5181
