Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15920
- Subject:
- NM_001031710.3
- Aligned Length:
- 1765
- Identities:
- 403
- Gaps:
- 1340
Alignment
Query 1 ATG-------CTGGGAGG--------------------GACTGATTGCAGAACCTTCTTG-------ACAAGCC 40
||| |||||..| |||.|| |.||||.|||..|| |.||||.
Sbjct 1 ATGGCAGCCTCTGGGGTGGAGAAGAGCAGCAAGAAGAAGACCGA--GAAGAAACTTGCTGCTCGGGAAGAAGCT 72
Query 41 A-------------------------CATAAATCTAA-----------AGAAAACGTTGTGTGACGTGATCCTC 78
| |||.|| ||| ||||||||||||||||||||||||||
Sbjct 73 AAATTGTTGGCGGGTTTCATGGGCGTCATGAA--TAACATGCGGAAACAGAAAACGTTGTGTGACGTGATCCTC 144
Query 79 ATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTGCAGCCAGTCATTTTTTTAACTTAATGTT 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 ATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTGCAGCCAGTCATTTTTTTAACTTAATGTT 218
Query 153 CACAACTAACATGCTTGAATCAAAGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGATATTATTGAACAAC 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 219 CACAACTAACATGCTTGAATCAAAGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGATATTATTGAACAAC 292
Query 227 TGGTGGAATTTGCTTATACTGCTAGAATTTCCGTGAATAGCAACAATGTTCAGTCTTTGTTGGATGCAGCAAAC 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 293 TGGTGGAATTTGCTTATACTGCTAGAATTTCCGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAAC 366
Query 301 CAATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTTTTGAAAGAACAAGTTGATGCTTCAAATTGTCT 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 CAATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTTTTGAAAGAACAAGTTGATGCTTCAAATTGTCT 440
Query 375 TGG-AGAAG--------------------------CAGAA---AAAG------------------TTGATCAGA 400
||| |.||| |.||| |||| ||.|||||.
Sbjct 441 TGGTATAAGTGTGCTAGCGGAGTGTCTAGATTGTCCTGAATTGAAAGCAACTGCAGATGACTTTATTCATCAGC 514
Query 401 GCCTTCCAG-AGT--------GTGGTATGCTTTTC----ACTGTG----------------------------- 432
.|.||.|.| ||| .|| |||..|||| ||| ||
Sbjct 515 ACTTTACTGAAGTTTACAAAACTG--ATGAATTTCTTCAACT-TGATGTCAAGCGAGTAACACATCTTCTCAAC 585
Query 433 -------------------------------------------------------------------------- 432
Sbjct 586 CAGGACACTCTGACTGTGAGAGCAGAGGATCAGGTTTATGATGCTGCAGTCAGGTGGTTGAAATACGATGAACC 659
Query 433 -------------------------------------------------------------------------- 432
Sbjct 660 TAATCGCCAGCCATTTATGGTTGATATCCTTGCTAAAGTCAGGTTTCCTCTTATATCAAAGAATTTCTTAAGTA 733
Query 433 -------------------------------------------------------------------------- 432
Sbjct 734 AAACGGTACAAGCTGAACCACTTATTCAAGACAATCCTGAATGCCTTAAGATGGTGATAAGTGGAATGAGGTAC 807
Query 433 -------------------------------------------------------------------------- 432
Sbjct 808 CATCTACTGTCTCCAGAGGACCGAGAAGAACTTGTAGATGGCACAAGACCTAGAAGAAAGAAACATGACTACCG 881
Query 433 -------------------------------------------------------------------------- 432
Sbjct 882 CATAGCCCTATTTGGAGGCTCTCAACCACAGTCTTGTAGATATTTTAACCCAAAGGATTATAGCTGGACAGACA 955
Query 433 -------------------------------------------------------------------------- 432
Sbjct 956 TCCGCTGCCCCTTTGAAAAACGAAGAGATGCAGCATGCGTGTTTTGGGACAATGTAGTATACATTTTGGGAGGC 1029
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1030 TCTCAGCTTTTCCCAATAAAGCGAATGGACTGCTATAATGTAGTGAAGGATAGCTGGTATTCGAAACTGGGTCC 1103
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1104 TCCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAGAAGGCAAAATTTATACATCTGGAGGTTCAGAAGTAG 1177
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1178 GAAACTCAGCTCTGTATTTATTTGAGTGCTATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTG 1251
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1252 ACCCAGCGCTGCAGCCATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAAACAA 1325
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1326 TGTTTCTGGGAGAGTGCTTAATTCCTGTGAAGTTTATGATCCTGCCACAGAAACATGGACTGAGCTGTGTCCAA 1399
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1400 TGATTGAAGCCAGGAAGAATCATGGGCTGGTATTTGTAAAAGACAAGATATTTGCTGTGGGTGGTCAGAATGGT 1473
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1474 TTAGGTGGTCTGGACAATGTGGAATATTACGATATTAAGTTGAACGAATGGAAGATGGTCTCACCAATGCCATG 1547
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1548 GAAGGGTGTAACAGTGAAATGTGCAGCAGTTGGCTCTATAGTTTATGTCTTGGCTGGTTTTCAGGGTGTTGGTC 1621
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1622 GATTAGGACACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCCA 1695
Query 433 --------------------------------------------------------------- 432
Sbjct 1696 GTCACAAGTTGTTTAATTTGTGTTGTCGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACA 1758