Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15939
- Subject:
- NM_001127359.1
- Aligned Length:
- 1377
- Identities:
- 632
- Gaps:
- 735
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAATCTGTTGAACAGAGAGAAATCAAGTTTATTAAACTGGGGCTAAGGAATAAACCAAAGAAAACAGCACATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAACCAGACCTCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTTCTCTGACCAGAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCAAAGGTCATCTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCA 370
Query 1 -----------------------------------------------------ATGCTGCTCCTGGGAACTGTG 21
|||||||||||||||||||||
Sbjct 371 CTTCTAGCCCACACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTG 444
Query 22 CATTGCCAGATTGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAG 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATTGCCAGATTGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAG 518
Query 96 AAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAG 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAG 592
Query 170 TTCAGAACCACGGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTT 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCAGAACCACGGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTT 666
Query 244 TTATCAGGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGA 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTATCAGGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGA 740
Query 318 TGGGAAGAAGACTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAG 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGGAAGAAGACTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAG 814
Query 392 AAGAGACAGCCTGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTC 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGAGACAGCCTGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTC 888
Query 466 TCTGATGAAGTCTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCTGATGAAGTCTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGA 962
Query 540 AGGTGTTCTTCGGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGACGCCCCTAAATCGGGTA 613
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.| ||
Sbjct 963 AGGTGTTCTTCGGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGG-------TATA-----TA 1024
Query 614 CTAGTTGCAGCTCTCGCTGTTCAAGT---TCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAA 684
|| ||| |..|.|||| |.||.|| |.|||
Sbjct 1025 CT--TTG----------TCCTTAAGTGTATACATAC-----------------------GTATC---------- 1053
Query 685 GATGTGTTATGGGAAGACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAA 758
|.|.|||| .||||||
Sbjct 1054 --TATTTTAT--------ATGTTAC------------------------------------------------- 1068
Query 759 TCATCAGATTAATCCATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCC 832
Sbjct 1069 -------------------------------------------------------------------------- 1068
Query 833 ATAGTTCCCACCCAGGATTAGAAAAAATAAGTGCTATAGTATGGGAAGGTAATGATTGTAAGAAAGCAGACATG 906
Sbjct 1069 -------------------------------------------------------------------------- 1068
Query 907 TCTGTACTTGAAATCAGTGGAATGATAATGAACAGAGTGAGTTTT 951
Sbjct 1069 --------------------------------------------- 1068
