Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15939
- Subject:
- XM_006716063.4
- Aligned Length:
- 2144
- Identities:
- 900
- Gaps:
- 1213
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAATCTGTTGAACAGAGAGAAATCAAGTTTATTAAACTGGGGCTAAGGAATAAACCAAAGAAAACAGCACATG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAACCAGACCTCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTTCTCTGACCAGAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCAAAGGTCATCTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCA 370
Query 1 -----------------------------------------------------ATGCTGCTCCTGGGAACTGTG 21
|||||||||||||||||||||
Sbjct 371 CTTCTAGCCCACACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTG 444
Query 22 CATTGCCAGATTGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAG 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATTGCCAGATTGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAG 518
Query 96 AAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAG 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAG 592
Query 170 TTCAGAACCACGGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTT 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCAGAACCACGGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTT 666
Query 244 TTATCAGGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGA 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTATCAGGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGA 740
Query 318 TGGGAAGAAGACTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAG 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGGAAGAAGACTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAG 814
Query 392 AAGAGACAGCCTGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTC 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGAGACAGCCTGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTC 888
Query 466 TCTGATGAAGTCTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCTGATGAAGTCTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGA 962
Query 540 AGGTGTTCTTCGGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGACGCCCCTAAATCGGGTA 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGGTGTTCTTCGGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGACGCCCCTAAATCGGGTA 1036
Query 614 CTAGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAAGAT 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTAGTTGCAGCTCTCGCTGTTCAAGTTCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAAGAT 1110
Query 688 GTGTTATGGGAAGACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAATCA 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTGTTATGGGAAGACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAATCA 1184
Query 762 TCAGATTAATCCATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAG------AGTCATTTGCC----- 824
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||.|||.|.||
Sbjct 1185 TCAGATTAATCCATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAGGTGAACAGCCATATACCAGGAA 1258
Query 825 --------------------------------------CTGG------CTCCAT---AGTTCCCAC-------- 843
|||| |||||| ..||||.||
Sbjct 1259 TAGGATACCAGATTTTTGGAAATGCAGTCTCTCTCATACTGGGTTTAACTCCATTTGTTTTCCGACTTTCTCAA 1332
Query 844 ---CCAGGATTAGAAAAAATAA---------GTGCTATAG-----TATGGGAAGGTA-ATGATTGTAAGAAAGC 899
.|||..||.|||.||.|.| .||||..|| ||||.||..|.| .||.||.|||..|||
Sbjct 1333 GCTACAGACTTGGAACAACTCACAGCACATTCTGCTTCAGAACTTTATGTGATTGCATTTGGTTCTAATGAAG- 1405
Query 900 AGACATGTC--TGTACTTGAAATCAGTGGAATGATAATGAACAGAGTGAGTTTT-------------------- 951
||||| .||.||| ||..||| |.|||| |.||||||
Sbjct 1406 ----ATGTCATAGTTCTT----TCTATGG--TTATAA---------TAAGTTTTGTGGTTCGCGTGTCTCTTGT 1460
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1461 GTGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAGAACTTATAAACAGCGATTACTTTTTGCAAAACTCTTTG 1534
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1535 GACATTTAACATCTGCAAGGAGGGCTCGAAAATCTGAGGTTCCTCATTTCCGGTTGAAGAAAGTACAGAATATA 1608
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1609 AAAATGTGGCTATCTCTCCGTTCCTATCTTAAGCGTCGAGGTCCTCAGCGATCAGTTGATGTAATAGTTTCATC 1682
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1683 TGCTTTCTTATTGACTATCTCAGTTGTATTTATCTGTTGTGCCCAGCTACTTCATGTACACGAGATCTTCCTTG 1756
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1757 ATTGTCACTACAATTGGGAATTGGTAATCTGGTGCATCTCGTTAACACTTTTTCTCCTAAGATTTGTTACCCTT 1830
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1831 GGATCAGAAACAAGTAAAAAATATAGTAATACCTCAATATTACTTACTGAACAGATAAACCTCTACTTGAAAAT 1904
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1905 GGAGAAAAAACCTAACAAAAAGGAGGAACTGACACTAGTGAATAATGTTTTAAAACTGGCTACTAAACTGCTAA 1978
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1979 AGGAGTTGGACAGTCCTTTTAGATTATATGGGCTTACAATGAATCCGCTGCTTTATAACATCACCCAGGTTGTT 2052
Query 952 ------------------------------------------------------------------------ 951
Sbjct 2053 ATCCTGTCAGCTGTTTCTGGTGTTATCAGTGACTTGCTTGGATTTAATTTAAAGCTATGGAAGATTAAGTCA 2124
