Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15952
- Subject:
- NM_001039081.2
- Aligned Length:
- 1536
- Identities:
- 429
- Gaps:
- 1071
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGCCATCTGTTGAGTCTTCAAGTCCAGGAGGCTCAGCAACATCAGAGGACCATGAGTTTGATCCATC 74
Query 1 -------------------------------------------------------ATGATGGAAGGAGAAACAA 19
||||||||||||||.||||
Sbjct 75 AGCTGACATGCTGGTTCATGATTTTGATGATGAGCGAACATTAGAAGAAGAAGAAATGATGGAAGGAGAGACAA 148
Query 20 ACTTCAGCTCTGAAATAGAAGATCTTGCAAGGGAAGGCGACATGCCAATTCATGAACTTCTCAGCCTTTATGGT 93
|||||||.|||||||||||.||||||||.||||||||||||||||||||.||.||.||.||||||||.||||||
Sbjct 149 ACTTCAGTTCTGAAATAGAGGATCTTGCGAGGGAAGGCGACATGCCAATCCACGAGCTGCTCAGCCTCTATGGT 222
Query 94 TATGGTAGTACTGTTCGACTACCTGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAAGAAGGTGAAGATGATGA 167
||||..||.||||||||..|||||||.||| |||||.||||||||.|||||.||.|||||||||||||||||
Sbjct 223 TATGACAGCACTGTTCGGTTACCTGAGGAA---GAGGAGGAGGAAGAGGAGGAGGAGGAAGGTGAAGATGATGA 293
Query 168 AGATGCTGATAATGATGACAACAGTGGCTGTAGTGGGGAAAATAAAGAGGAGAATATAAAGGATTCATCAGGTC 241
||||||||||||||||||.|||||||||||||||||.|||||||||||.||||||||||||||||||||.||||
Sbjct 294 AGATGCTGATAATGATGATAACAGTGGCTGTAGTGGAGAAAATAAAGAAGAGAATATAAAGGATTCATCGGGTC 367
Query 242 AGGAGGATGAAACTCAGTCTTCCAATGATGATCCATCACAATCTGTTGCTTCTCAAGATGCCCAGGAAATAATC 315
||||||||||||||||||||||||||||||||||.|||||.||||||.||||.||||||||.||||||||||||
Sbjct 368 AGGAGGATGAAACTCAGTCTTCCAATGATGATCCCTCACAGTCTGTTACTTCCCAAGATGCTCAGGAAATAATC 441
Query 316 CGCCCACGTCGATGTAAATATTTTGATACAAATAGTGAAGTAGAAGAAGAATCTGAAGAAGATGAAGATTATAT 389
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 442 CGCCCACGTCGATGTAAATATTTTGATACAAATAGTGAAATAGAAGAAGAATCTGAAGAAGATGAAGATTATAT 515
Query 390 TCCATCAGAAGACTGGAAAAAGGAGATTATGGTGGGCTCCATGTTTCAAGCAGAAATTCCAGTTGGCATTTGTA 463
|||.||||||||||||||||||||.||.|||||||||||||||||||||||.||.|||||||||||..||||||
Sbjct 516 TCCCTCAGAAGACTGGAAAAAGGAAATCATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTA 589
Query 464 GATAC--------------------------------------------------------------------- 468
|||||
Sbjct 590 GATACAAAGAAAATGAAAAAGTGTATGAAAATGATGATCAGCTTCTGTGGGATCCAGAGTGTTTACCAGAAGAG 663
Query 469 -------------------------------------------------------------------------- 468
Sbjct 664 AAAGTGGTTGTCTTTCTTAAGGATGCGTCTAGAAGGACAGGGGATGAGAAAGGTGTGGAAGCAATCCCTGAAGG 737
Query 469 -------------------------------------------------------------------------- 468
Sbjct 738 CTCGCATATCAAAGACAATGAGCAGGCTTTATATGAGTTGGTTAAATGCAGCTTTGATACGGAAGAAGCCTTGA 811
Query 469 -------------------------------------------------------------------------- 468
Sbjct 812 GAAGACTGAGATTTAATGTCAAAGCAGCTCGAGAGGAGTTATCTGTGTGGACAGAGGAAGAGTGTAGAAATTTT 885
Query 469 -------------------------------------------------------------------------- 468
Sbjct 886 GAGCAAGGGCTGAAGGCCTATGGAAAAGATTTTCATCTGATTCAGGCTAATAAAGTCCGAACAAGATCAGTTGG 959
Query 469 -------------------------------------------------------------------------- 468
Sbjct 960 TGAATGTGTAGCATTCTATTACATGTGGAAAAAGTCTGAGCGCTATGATTTCTTTGCTCAGCAAACAAGGTTTG 1033
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1034 GAAAAAAGAAATATAATCTTCATCCTGGTGTAACGGATTACATGGATCGTCTTTTGGATGAAAGTGAAAGTGCT 1107
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1108 GCTTCTAGCCGAGCACCATCCCCCCCTCCCACTGCCTCAAATAGCAGTAACAGCCAGTCCGAGAAAGAAGATGG 1181
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1182 CGCTGTCAGCAGTAGGAATCAGAACGGTGTCTCATCTAATGGACCAGGAGAAATACTAAACAAAGAAGAAGTAA 1255
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1256 AAGTTGAAGGGTTACATGTTAATGGACCAACAGGTGGAAATAAGAAACCACTTCTTACAGATATGGACACTAAT 1329
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1330 GGTTATGAAGCAAATAACCTGACCACTGACCCAAAACTTGCCCATATGACTGCAAGAAATGAAAATGATTTTGA 1403
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1404 TGAAAAAAATGAGAGACCTGCCAAAAGGCGGCGGATAAACAGCAGTGGGAAAGAAAGTCCGGGCTCATCTGAGT 1477
Query 469 -------------------------------------------------------- 468
Sbjct 1478 TTTTCCAGGAAGCAGTCTCACATGGGAAGTTTGAGGAACATGAAAACACGAATGAC 1533
