Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15952
- Subject:
- NM_001077702.3
- Aligned Length:
- 1350
- Identities:
- 468
- Gaps:
- 882
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTATGTTTAATTGGTTTACAGACTGTCTGTGGACTCTTTTCCTGTCAAATTACCAGCCATCTGTTGAATC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCAAGTCCAGGAGGTTCAGCAACATCAGATGACCATGAATTTGATCCATCAGCTGACATGCTGGTTCATGATT 148
Query 1 --------------------------------ATGATGGAAGGAGAAACAAACTTCAGCTCTGAAATAGAAGAT 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTGATGATGAACGAACATTAGAAGAGGAAGAAATGATGGAAGGAGAAACAAACTTCAGCTCTGAAATAGAAGAT 222
Query 43 CTTGCAAGGGAAGGCGACATGCCAATTCATGAACTTCTCAGCCTTTATGGTTATGGTAGTACTGTTCGACTACC 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTTGCAAGGGAAGGCGACATGCCAATTCATGAACTTCTCAGCCTTTATGGTTATGGTAGTACTGTTCGACTACC 296
Query 117 TGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAAGAAGGTGAAGATGATGAAGATGCTGATAATGATGACAACA 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAAGAAGGTGAAGATGATGAAGATGCTGATAATGATGACAACA 370
Query 191 GTGGCTGTAGTGGGGAAAATAAAGAGGAGAATATAAAGGATTCATCAGGTCAGGAGGATGAAACTCAGTCTTCC 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTGGCTGTAGTGGGGAAAATAAAGAGGAGAATATAAAGGATTCATCAGGTCAGGAGGATGAAACTCAGTCTTCC 444
Query 265 AATGATGATCCATCACAATCTGTTGCTTCTCAAGATGCCCAGGAAATAATCCGCCCACGTCGATGTAAATATTT 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AATGATGATCCATCACAATCTGTTGCTTCTCAAGATGCCCAGGAAATAATCCGCCCACGTCGATGTAAATATTT 518
Query 339 TGATACAAATAGTGAAGTAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCATCAGAAGACTGGAAAAAGG 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGATACAAATAGTGAAGTAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCATCAGAAGACTGGAAAAAGG 592
Query 413 AGATTATGGTGGGCTCCATGTTTCAAGCAGAAATTCCAGTTGGCATTTGTAGATAC------------------ 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGATTATGGTGGGCTCCATGTTTCAAGCAGAAATTCCAGTTGGCATTTGTAGATACAAAGAAAATGAAAAAGTA 666
Query 469 -------------------------------------------------------------------------- 468
Sbjct 667 TATGAAAATGATGATCAGCTCCTGTGGGACCCTGAGTACTTACCAGAAGATAAAGTGATTATATTTCTTAAAGA 740
Query 469 -------------------------------------------------------------------------- 468
Sbjct 741 TGCATCTAGAAGAACAGGTGATGAGAAGGGTGTAGAAGCAATTCCTGAAGGATCTCACATAAAAGACAATGAAC 814
Query 469 -------------------------------------------------------------------------- 468
Sbjct 815 AGGCTTTATATGAATTGGTTAAATGCAATTTTGATACAGAAGAAGCATTGAGAAGATTAAGATTTAATGTAAAA 888
Query 469 -------------------------------------------------------------------------- 468
Sbjct 889 GCAGCTAGAGAGGAATTATCTGTTTGGACAGAGGAAGAGTGTAGAAATTTTGAACAAGGGCTGAAGGCCTATGG 962
Query 469 -------------------------------------------------------------------------- 468
Sbjct 963 AAAGGATTTTCATTTGATTCAGGCTAATAAAGTCCGAACAAGGTCAGTTGGTGAATGTGTAGCATTCTATTACA 1036
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1037 TGTGGAAAAAATCTGAACGTTATGATTTCTTTGCTCAGCAAACACGATTTGGAAAGAAGAAATATAATCTTCAT 1110
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1111 CCTGGTGTAACGGATTACATGGATCGTCTTCTAGACGAAAGTGAAAGTGCTGCATCTAGTCGAGCACCATCCCC 1184
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1185 TCCCCCAACTGCATCAAACAGTAGTAACAGCCAGTCTGAGAAAGAAGATGGCACTGTAAGCACTGCTAATCAAA 1258
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1259 ATGGAGTGTCATCTAATGGACCAGGCATACTCCAAATGCTTCTTCCAGTTCATTTTTCAGCCATCAGTTCAAGA 1332
Query 469 ------------------ 468
Sbjct 1333 GCCAATGCCTTTTTAAAA 1350
