Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15957
Subject:
XR_002958800.1
Aligned Length:
2018
Identities:
179
Gaps:
1825

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAGAAATCTCCGGCCCGGCCCGCATCGCCAGCCCCCAGGCCCGGAGGAACGGCCCGAGCCCAGGAGAACCACA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCTTCGTCCCAGCCCCGGAGGCTCCTGTGGGCAAGATCGTGAGCCAACGGGTTCCTGAGGCCCCTCCTGGCCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAGGGTTTCCCCGCGCGTTTCCGAGGAGCCCTGCCTGGCCGGGCGGCTGGACAAACAGGTCGTAGCACCGATC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCGCCCGCCCCCAGCAGGGGTCCCGCACAGGCTTGCCCCTGACCCCCACCCAAACCTGTCCTTCCGCTTTGCCC  296

Query    1  ------------------------------------------------ATGAGGTTGGCAGGCCCTCTCCGCAT  26
                                                            ||||||||||||||||||||||||||
Sbjct  297  CCAAACAGTGCACTTGCCGGCGGTCCCAACCCAGCAGGAGAAGTGGACATGAGGTTGGCAGGCCCTCTCCGCAT  370

Query   27  TGTGGTCCTAGTCGTCAGTGTGGGTGTCACATGGATCGTGGTCAGCATCCTCCTGGGTGGGCCTGGCAGTGGCT  100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGTGGTCCTAGTCGTCAGTGTGGGTGTCACATGGATCGTGGTCAGCATCCTCCTGGGTGGGCCTGGCAGTGGCT  444

Query  101  TTCCTCGCATCCAGCAACTCTTCACCAGCTGGAGTGCAGTGGTGCAATCTCGGTTCACTGCAACCTCTAC-CTC  173
            ||||||||||||||||||||||||||      |||.|||.|     |.||||| |.||||| |.|.|.|| ..|
Sbjct  445  TTCCTCGCATCCAGCAACTCTTCACC------AGTCCAGAG-----AGCTCGG-TGACTGC-AGCGCCACGGGC  505

Query  174  CTGG--GTTCAAGCGATTCTAG--TGCCCCAGCC---TCCCGAG------------------------------  210
            |.||  ||.||||    |.|.|  ||||||||||   |||.|||                              
Sbjct  506  CAGGAAGTACAAG----TGTGGCCTGCCCCAGCCGTGTCCTGAGGAGCACCTGGCCTTCCGCGTGGTCAGCGGG  575

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct  576  GCCGCCAACGTCATTGGGCCCAAGATCTGCCTCGAGGACAAGATGCTGATGAGCAGCGTCAAGGACAACGTGGG  649

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct  650  CCGCGGGCTGAACATCGCCCTGGTGAACGGGGTCAGCGGCGAGCTCATCGAGGCCCGGGCCTTTGACATGTGGG  723

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct  724  CCGGAGGTGAGTTGCAGCGCAGCGTCTTGCATTTTGACTGCAGCAAAATGACCTGGGCAGCTTCCCCTGAGACA  797

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct  798  CTGCTCTCTCTGTCTGTACTTGGAGCTTCTCAGTCACCTCCGTGGGTTCAGAAAGGACAGGGGCATCGCCAGCT  871

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct  872  TGGTCTGGAGGCTGTGGGAGGTCACGGGGATGCCTCAGCTTCCTACACCAGCCTGTCCCTTGGCGGGGCATGTC  945

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct  946  CCAGGCCCAATCCCTACTTCTGTTTCCTTGTTTGGAGAACGGGCTTGTGGGAGGGTGCTCAGTGGTGCCTGATG  1019

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1020  ACCCCTGTTCCGTGGCACCTGCCCCCCCAGATGTCAACGACCTGTTGAAGTTTATTCGGCCACTGCACGAAGGC  1093

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1094  ACCCTGGTGTTCGTGGCATCCTACGACGACCCAGCCACCAAGATGAATGAAGAGACCAGAAAGCTCTTCAGTGA  1167

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1168  GCTGGGCAGCAGGAACGCCAAGGAGCTGGCCTTCCGGGACAGCTGGGTGTTTGTCGGGGCCAAGGGTGTGCAGA  1241

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1242  ACAAGAGCCCCTTTGAGCAGCACGTGAAGAACAGTAAGCACAGCAACAAGTACGAAGGCTGGCCCGAGGCGCTG  1315

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1316  GAGATGGAAGGCTGTATCCCGCGGAGAAGCACGGCCAGCTAGCACGGCCAGTGCCAGGACCGGGCCGAGGGAGG  1389

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1390  CCAGACCAAGGGAGGCACGCGCGCTGCCGGGCGGACAGAGGCTGAGGCTCACACCCCACACCCGGGCAGGAGCG  1463

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1464  CTCCCTGGCCCCAACACATCGGGGCTCCGAGGCAGTGACCAGAACGTGGTCTCAAGGTGGTGGGGGCTATGGGG  1537

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1538  GCTGCAGGGGGTAGCCCTGCCGCACTTTGTCACGGGAGCCCAGGGTACCCGCCTCCTTTTCGTAACACTGTTCC  1611

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1612  CCCCGGTCAGCCCATCTAGCCCTGTCCTCCATTCCTCACGCCATCTCCATCCCCATCTTGAGTCCTGGAACGGC  1685

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1686  CCTGGGTGCCTGCCCCTCACTGTGCATCTCTGGGAGCAGCCCGGCAGGTTGGGGCGTCTTCCAGAACCTCTCCC  1759

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1760  TTCTGGAGCCACTCTGCACTGCGGGCTAAACATGTTTCCAGTGTGATTCCTTCCAGTGAGCCAAACCCGGTGGC  1833

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1834  TGCTTCATGAGCCTGACTGCCTCTCGCCTGCTCTCAGCAGGAAGGGACCCCTGGAGCAGGCTGGCCCGGGGTGG  1907

Query  211  --------------------------------------------------------------------------  210
                                                                                      
Sbjct 1908  TGAAGTAGCTGGAGCCCGATCACAGTCCCGCGGTTTGTCAGGGGGCCCACCTTCTAGATGACCCCTTAATAAAG  1981

Query  211  --------------------  210
                                
Sbjct 1982  TGATGGCCCCACAGAAGAAA  2001

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