Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15997
- Subject:
- NM_001308116.2
- Aligned Length:
- 2958
- Identities:
- 388
- Gaps:
- 2562
Alignment
Query 1 ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCAC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCAC 74
Query 75 CACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGT-------- 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGTACAGGTAA 148
Query 141 ----ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAG 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTCAACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAG 222
Query 211 CACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGT 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGT 296
Query 285 TCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCC 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCC 370
Query 359 AAACGTCTGT-AAGTTC---------CCTAAATTTTTTTTTCCTG--GATTTAAAA----TTT----------- 405
||||||||.| ||..|| ||||.| |||| .|.||||.| .||
Sbjct 371 AAACGTCTATCAACCTCTCCACTTCTCCTACA---------CCTGCACAGTTAATAAGCCGTTCCCAGGCTTCC 435
Query 406 -------------------------------------------------------------------------- 405
Sbjct 436 AGTTCTACCAGCGGCAGTATTACCCAACAGACTATGTTACTAGGGAGTACTTCCCCTACCCTAACGGCAAGCCA 509
Query 406 -------------------------------------------------------------------------- 405
Sbjct 510 AGCTCAAATGTATCTCCGAGCTCAAATGCTGATTTTCACACCCGCTACCACTGTGGCTGCTGTACAGTCTGACA 583
Query 406 -------------------------------------------------------------------------- 405
Sbjct 584 TTCCTGTTGTCTCGTCGTCATCGTCATCTTCCTGTCAGTCTGCAGCTACTCAGGTTCAGAATTTAACATTACGC 657
Query 406 -------------------------------------------------------------------------- 405
Sbjct 658 AGCCAGAAGTTGGGTGTATTATCTAGCTCACAGAATGGTCCACCAAAAAGCACTAGTCAAACTCAGTCATTGAC 731
Query 406 -------------------------------------------------------------------------- 405
Sbjct 732 AATTTGTCATAACAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGATCCTTCTCCAGAAAGTAATAAGA 805
Query 406 -------------------------------------------------------------------------- 405
Sbjct 806 AAGGAGAGAGCCCAAGCCTGGAATCACGAAGCACAGCTGTCACCCGGACATCAAGTATTCACCAGTTAATAGCA 879
Query 406 -------------------------------------------------------------------------- 405
Sbjct 880 CCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAATAAAACATCAGCAGATTCCTCTTCATTCACCACCTTC 953
Query 406 -------------------------------------------------------------------------- 405
Sbjct 954 CAAAGTTTCCCATCATCAGCTGATATTACAACAGCAGCAACAGCAAATTCAGCCAATCACACTTCAGAATTCAA 1027
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1028 CTCAAGACCCACCCCCATCCCAGCACTGTATACCACTCCAGAACCATGGCCTTCCTCCAGCTCCCAGTAATGCC 1101
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1102 CAGTCACAGCATTGTTCACCGATTCAGAGTCATCCCTCTCCTTTAACAGTGTCTCCTAATCAGTCACAGTCAGC 1175
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1176 ACAGCAGTCTGTAGTGGTGTCTCCTCCACCACCTCATTCACCAAGTCAGTCTCCTACTATAATTATTCATCCAC 1249
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1250 AAGCACTTATTCAGCCACACCCTCTTGTGTCATCAGCTCTCCAGCCAGGGCCAAATTTGCAGCAGTCCACTGCT 1323
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1324 AATCAGGTGCAAGCTACAGCACAGTTGAATCTTCCATCCCATCTTCCACTTCCAGCTTCCCCTGTTGTACACAT 1397
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1398 TGGCCCAGTTCAGCAGTCTGCCTTGGTATCCCCAGGCCAGCAGATTGTCTCTCCATCACACCAGCAATATTCAT 1471
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1472 CCCTGCAGTCCTCTCCAATCCCAATTGCAAGTCCTCCACAGATGTCGACATCTCCTCCAGCTCAGATTCCACCA 1545
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1546 CTGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTGTCCCAGGGCCAGGTTTTGGTGCAGAA 1619
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1620 TGCTTTGGTGTCAGAAGAGGAACTTCCAGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTC 1693
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1694 CACAGACTGTTGCGGTAAACCTACAAGTGCAACCACCAGCACCTGTTGATCCACCAGTGGTTTATCAGGTAGAA 1767
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1768 GATGTGTGTGAAGAAGAAATGCCAGAAGAGTCAGATGAATGTGTCCGGATGGATAGAACCCCACCACCACCCAC 1841
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1842 TTTGTCTCCAGCAGCTATAACAGTGGGGAGAGGAGAAGATTTGACTTCTGAACATCCTTTGTTAGAGCAAGTGG 1915
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1916 AATTACCTGCTGTGGCATCAGTCAGTGCTTCAGTAATTAAATCTCCATCAGATCCCTCACATGTTTCTGTTCCA 1989
Query 406 -------------------------------------------------------------------------- 405
Sbjct 1990 CCACCTCCATTGTTACTTCCAGCTGCCACCACAAGGAGTAACAGTACATCTATGCACAGTAGCATTCCCAGTAT 2063
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2064 AGAGAACAAACCTCCACAGGCTATTGTTAAACCACAGATCCTAACCCATGTTATTGAAGGCTTTGTGATTCAGG 2137
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2138 AGGGATTGGAGCCATTTCCTGTGAGTCGTTCCTCTTTGCTAATAGAACAGCCTGTGAAAAAACGGCCTCTTTTG 2211
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2212 GATAATCAGGTGATAAATTCAGTGTGTGTTCAGCCAGAGCTACAGAATAATACAAAACATGCGGATAATTCATC 2285
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2286 TGACACAGAGATGGAAGACATGATTGCTGAAGAGACATTAGAAGAAATGGACAGTGAGTTGCTCAAGTGTGAAT 2359
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2360 TCTGTGGGAAAATGGGATATGCTAATGAATTTTTGCGGTCAAAACGATTCTGCACTATGTCATGTGCCAAAAGG 2433
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2434 TACAATGTTAGCTGTTCTAAAAAATTTGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAAAGTCTTGGGCA 2507
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2508 TCGTGGCCGTCGTCCAAGTGGCCCTGATGGGGCAGCGAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATC 2581
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2582 CATCTGCAGAAGAAGACTTGGCTTCTCATGAAGATTCTGTGCCATCTGCTATGACAACTCGTCTGCGCAGGCAG 2655
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2656 AGCGAGCGGGAAAGAGAACGTGAGCTTCGGGATGTGAGAATTCGGAAAATGCCTGAGAACAGTGACTTGCTACC 2729
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2730 AGTTGCACAAACAGAGCCATCTATATGGACAGTTGATGATGTCTGGGCCTTCATCCATTCTTTGCCTGGCTGCC 2803
Query 406 -------------------------------------------------------------------------- 405
Sbjct 2804 AGGATATCGCAGATGAATTCAGAGCACAGGAGATTGATGGACAGGCCCTTCTCTTGCTGAAAGAAGACCATCTC 2877
Query 406 ------------------------------------------------------------------------ 405
Sbjct 2878 ATGAGTGCAATGAATATCAAGCTAGGCCCAGCCCTGAAGATCTGTGCACGCATCAACTCTCTGAAGGAATCT 2949
