Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15997
Subject:
XM_006713756.3
Aligned Length:
2775
Identities:
394
Gaps:
2370

Alignment

Query    1  ------------------------------------ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC  38
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGGAAGCGGAATTTAAGGACCATAGTACAGCTATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTC  74

Query   39  AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG  112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AACAACAACCAGCAGTACCACCACCACCACCATCACCACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTG  148

Query  113  TCTACAGTGGTTCAGACCGACATGCTGT------------ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT  174
            ||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||
Sbjct  149  TCTACAGTGGTTCAGACCGACATGCTGTACAGGTAATTCAACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCT  222

Query  175  CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCA  296

Query  249  TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC  322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTC  370

Query  323  CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGT----AAGTT------------CCCTAAA  380
            ||||||||||||||||||||||||||||||||||||||||||||||    ||.||            ||..||.
Sbjct  371  CCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGTTCAGAATTTAACATTACGCAGCCAGAAG  444

Query  381  TT---TTTTTTTCCTGG------------------------------------------ATTTAAAATTT----  405
            ||   |.|.||..||.|                                          |||.|.|||||    
Sbjct  445  TTGGGTGTATTATCTAGCTCACAGAATGGTCCACCAAAAAGCACTAGTCAAACTCAGTCATTGACAATTTGTCA  518

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  519  TAACAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGATCCTTCTCCAGAAAGTAATAAGAAAGGAGAGA  592

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  593  GCCCAAGCCTGGAATCACGAAGCACAGCTGTCACCCGGACATCAAGTATTCACCAGTTAATAGCACCAGCTTCA  666

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  667  TATTCTCCAATTCAGCCTCATTCTCTAATAAAACATCAGCAGATTCCTCTTCATTCACCACCTTCCAAAGTTTC  740

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  741  CCATCATCAGCTGATATTACAACAGCAGCAACAGCAAATTCAGCCAATCACACTTCAGAATTCAACTCAAGACC  814

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  815  CACCCCCATCCCAGCACTGTATACCACTCCAGAACCATGGCCTTCCTCCAGCTCCCAGTAATGCCCAGTCACAG  888

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  889  CATTGTTCACCGATTCAGAGTCATCCCTCTCCTTTAACAGTGTCTCCTAATCAGTCACAGTCAGCACAGCAGTC  962

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  963  TGTAGTGGTGTCTCCTCCACCACCTCATTCACCAAGTCAGTCTCCTACTATAATTATTCATCCACAAGCACTTA  1036

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1037  TTCAGCCACACCCTCTTGTGTCATCAGCTCTCCAGCCAGGGCCAAATTTGCAGCAGTCCACTGCTAATCAGGTG  1110

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1111  CAAGCTACAGCACAGTTGAATCTTCCATCCCATCTTCCACTTCCAGCTTCCCCTGTTGTACACATTGGCCCAGT  1184

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1185  TCAGCAGTCTGCCTTGGTATCCCCAGGCCAGCAGATTGTCTCTCCATCACACCAGCAATATTCATCCCTGCAGT  1258

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1259  CCTCTCCAATCCCAATTGCAAGTCCTCCACAGATGTCGACATCTCCTCCAGCTCAGATTCCACCACTGCCCTTG  1332

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1333  CAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTGTCCCAGGGCCAGGTTTTGGTGCAGAATGCTTTGGT  1406

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1407  GTCAGAAGAGGAACTTCCAGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTCCACAGACTG  1480

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1481  TTGCGGTAAACCTACAAGTGCAACCACCAGCACCTGTTGATCCACCAGTGGGAATGCATTTGAACCAGTGTCAT  1554

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1555  CTGCACAAAGTTTTTTCTCTTAAGGTTTATCAGGTAGAAGATGTGTGTGAAGAAGAAATGCCAGAAGAGTCAGA  1628

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1629  TGAATGTGTCCGGATGGATAGAACCCCACCACCACCCACTTTGTCTCCAGCAGCTATAACAGTGGGGAGAGGAG  1702

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1703  AAGATTTGACTTCTGAACATCCTTTGTTAGAGCAAGTGGAATTACCTGCTGTGGCATCAGTCAGTGCTTCAGTA  1776

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1777  ATTAAATCTCCATCAGATCCCTCACATGTTTCTGTTCCACCACCTCCATTGTTACTTCCAGCTGCCACCACAAG  1850

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1851  GAGTAACAGTACATCTATGCACAGTAGCATTCCCAGTATAGAGAACAAACCTCCACAGGCTATTGTTAAACCAC  1924

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1925  AGATCCTAACCCATGTTATTGAAGGCTTTGTGATTCAGGAGGGATTGGAGCCATTTCCTGTGAGTCGTTCCTCT  1998

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1999  TTGCTAATAGAACAGCCTGTGAAAAAACGGCCTCTTTTGGATAATCAGGTGATAAATTCAGTGTGTGTTCAGCC  2072

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2073  AGAGCTACAGAATAATACAAAACATGCGGATAATTCATCTGACACAGAGATGGAAGACATGATTGCTGAAGAGA  2146

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2147  CATTAGAAGAAATGGACAGTGAGTTGCTCAAGTGTGAATTCTGTGGGAAAATGGGATATGCTAATGAATTTTTG  2220

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2221  CGGTCAAAACGATTCTGCACTATGTCATGTGCCAAAAGGTACAATGTTAGCTGTTCTAAAAAATTTGCACTTAG  2294

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2295  TCGTTGGAATCGTAAGCCTGATAATCAAAGTCTTGGGCATCGTGGCCGTCGTCCAAGTGGCCCTGATGGGGCAG  2368

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2369  CGAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATCCATCTGCAGAAGAAGACTTGGCTTCTCATGAAGAT  2442

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2443  TCTGTGCCATCTGCTATGACAACTCGTCTGCGCAGGCAGAGCGAGCGGGAAAGAGAACGTGAGCTTCGGGATGT  2516

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2517  GAGAATTCGGAAAATGCCTGAGAACAGTGACTTGCTACCAGTTGCACAAACAGAGCCATCTATATGGACAGTTG  2590

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2591  ATGATGTCTGGGCCTTCATCCATTCTTTGCCTGGCTGCCAGGATATCGCAGATGAATTCAGAGCACAGGAGATT  2664

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2665  GATGGACAGGCCCTTCTCTTGCTGAAAGAAGACCATCTCATGAGTGCAATGAATATCAAGCTAGGCCCAGCCCT  2738

Query  406  -------------------------------------  405
                                                 
Sbjct 2739  GAAGATCTGTGCACGCATCAACTCTCTGAAGGAATCT  2775

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