Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15997
Subject:
XM_017007236.2
Aligned Length:
2994
Identities:
388
Gaps:
2598

Alignment

Query    1  ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCAC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCAC  74

Query   75  CACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGTACAGGCAT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGTACAGGCAT  148

Query  149  TGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAGCACTTGATGCTG  222

Query  223  CATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGTTCAGGCAAGTTT  296

Query  297  GTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTGT-A  369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.| |
Sbjct  297  GTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCCAAACGTCTATCA  370

Query  370  AGTTC---------CCTAAATTTTTTTTTCCTG--GATTTAAAA----TTT-----------------------  405
            |..||         ||||.|         ||||  .|.||||.|    .||                       
Sbjct  371  ACCTCTCCACTTCTCCTACA---------CCTGCACAGTTAATAAGCCGTTCCCAGGCTTCCAGTTCTACCAGC  435

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  436  GGCAGTATTACCCAACAGACTATGTTACTAGGGAGTACTTCCCCTACCCTAACGGCAAGCCAAGCTCAAATGTA  509

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  510  TCTCCGAGCTCAAATGCTGATTTTCACACCCGCTACCACTGTGGCTGCTGTACAGTCTGACATTCCTGTTGTCT  583

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  584  CGTCGTCATCGTCATCTTCCTGTCAGTCTGCAGCTACTCAGGTTCAGAATTTAACATTACGCAGCCAGAAGTTG  657

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  658  GGTGTATTATCTAGCTCACAGAATGGTCCACCAAAAAGCACTAGTCAAACTCAGTCATTGACAATTTGTCATAA  731

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  732  CAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGATCCTTCTCCAGAAAGTAATAAGAAAGGAGAGAGCC  805

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  806  CAAGCCTGGAATCACGAAGCACAGCTGTCACCCGGACATCAAGTATTCACCAGTTAATAGCACCAGCTTCATAT  879

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  880  TCTCCAATTCAGCCTCATTCTCTAATAAAACATCAGCAGATTCCTCTTCATTCACCACCTTCCAAAGTTTCCCA  953

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  954  TCATCAGCTGATATTACAACAGCAGCAACAGCAAATTCAGCCAATCACACTTCAGAATTCAACTCAAGACCCAC  1027

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1028  CCCCATCCCAGCACTGTATACCACTCCAGAACCATGGCCTTCCTCCAGCTCCCAGTAATGCCCAGTCACAGCAT  1101

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1102  TGTTCACCGATTCAGAGTCATCCCTCTCCTTTAACAGTGTCTCCTAATCAGTCACAGTCAGCACAGCAGTCTGT  1175

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1176  AGTGGTGTCTCCTCCACCACCTCATTCACCAAGTCAGTCTCCTACTATAATTATTCATCCACAAGCACTTATTC  1249

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1250  AGCCACACCCTCTTGTGTCATCAGCTCTCCAGCCAGGGCCAAATTTGCAGCAGTCCACTGCTAATCAGGTGCAA  1323

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1324  GCTACAGCACAGTTGAATCTTCCATCCCATCTTCCACTTCCAGCTTCCCCTGTTGTACACATTGGCCCAGTTCA  1397

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1398  GCAGTCTGCCTTGGTATCCCCAGGCCAGCAGATTGTCTCTCCATCACACCAGCAATATTCATCCCTGCAGTCCT  1471

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1472  CTCCAATCCCAATTGCAAGTCCTCCACAGATGTCGACATCTCCTCCAGCTCAGATTCCACCACTGCCCTTGCAG  1545

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1546  TCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTGTCCCAGGGCCAGGTTTTGGTGCAGAATGCTTTGGTGTC  1619

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1620  AGAAGAGGAACTTCCAGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTCCACAGACTGTTG  1693

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1694  CGGTAAACCTACAAGTGCAACCACCAGCACCTGTTGATCCACCAGTGGGAATGCATTTGAACCAGTGTCATCTG  1767

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1768  CACAAAGTTTTTTCTCTTAAGGTTTATCAGGTAGAAGATGTGTGTGAAGAAGAAATGCCAGAAGAGTCAGATGA  1841

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1842  ATGTGTCCGGATGGATAGAACCCCACCACCACCCACTTTGTCTCCAGCAGCTATAACAGTGGGGAGAGGAGAAG  1915

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1916  ATTTGACTTCTGAACATCCTTTGTTAGAGCAAGTGGAATTACCTGCTGTGGCATCAGTCAGTGCTTCAGTAATT  1989

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1990  AAATCTCCATCAGATCCCTCACATGTTTCTGTTCCACCACCTCCATTGTTACTTCCAGCTGCCACCACAAGGAG  2063

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2064  TAACAGTACATCTATGCACAGTAGCATTCCCAGTATAGAGAACAAACCTCCACAGGCTATTGTTAAACCACAGA  2137

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2138  TCCTAACCCATGTTATTGAAGGCTTTGTGATTCAGGAGGGATTGGAGCCATTTCCTGTGAGTCGTTCCTCTTTG  2211

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2212  CTAATAGAACAGCCTGTGAAAAAACGGCCTCTTTTGGATAATCAGGTGATAAATTCAGTGTGTGTTCAGCCAGA  2285

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2286  GCTACAGAATAATACAAAACATGCGGATAATTCATCTGACACAGAGATGGAAGACATGATTGCTGAAGAGACAT  2359

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2360  TAGAAGAAATGGACAGTGAGTTGCTCAAGTGTGAATTCTGTGGGAAAATGGGATATGCTAATGAATTTTTGCGG  2433

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2434  TCAAAACGATTCTGCACTATGTCATGTGCCAAAAGGTACAATGTTAGCTGTTCTAAAAAATTTGCACTTAGTCG  2507

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2508  TTGGAATCGTAAGCCTGATAATCAAAGTCTTGGGCATCGTGGCCGTCGTCCAAGTGGCCCTGATGGGGCAGCGA  2581

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2582  GAGAACATATCCTTAGGCAGCTTCCAATTACTTATCCATCTGCAGAAGAAGACTTGGCTTCTCATGAAGATTCT  2655

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2656  GTGCCATCTGCTATGACAACTCGTCTGCGCAGGCAGAGCGAGCGGGAAAGAGAACGTGAGCTTCGGGATGTGAG  2729

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2730  AATTCGGAAAATGCCTGAGAACAGTGACTTGCTACCAGTTGCACAAACAGAGCCATCTATATGGACAGTTGATG  2803

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2804  ATGTCTGGGCCTTCATCCATTCTTTGCCTGGCTGCCAGGATATCGCAGATGAATTCAGAGCACAGGAGATTGAT  2877

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2878  GGACAGGCCCTTCTCTTGCTGAAAGAAGACCATCTCATGAGTGCAATGAATATCAAGCTAGGCCCAGCCCTGAA  2951

Query  406  ----------------------------------  405
                                              
Sbjct 2952  GATCTGTGCACGCATCAACTCTCTGAAGGAATCT  2985

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