Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16008
- Subject:
- NM_134136.3
- Aligned Length:
- 3582
- Identities:
- 1164
- Gaps:
- 2304
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGACCACGAAAGAAAAGTGCTAAAGTGTGTGTGATGGACAGTGAGGTCGCTGAGGAAATGACAGCCGATGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGAAGGACTACATGAACCAGCTGTCACATGAAGTGCTCTGTCATATCTTCAGGTACCTGCCACTACAGGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCATGTGCATGGAATGCCTCTCTCGGAAGCTAAAGGAGGCAGTCACTCTGTATCTGAGAGTTGTCAGAGTGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATCTCTGTGCAGGGCGCTGGTGGGAATATATGCCAAGTGGCTTCACAGATTCCAGTTTCCTAACCCTTTTGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGATGCCAGATGTTGAACAGCTGTATGGCCTTCACCCTAGATACCTCGAGAGGCGAAGAGTGAGGGGCCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGCTTTCAGCATCCCAGGAGTCTTGGAAGCTTTGCAAGCGTGCCCAAACTTGGTGGGTGTAGAAACATCTCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTGGAGTTGGTAGAATCCATTTGGACATATATGCCGCATGTTCATATTTTGGGGAAATTTCGTAATCGTAACGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCATTTCCGATTCCTCCTGAAAATAAACTGAAAATCCCCATAGGAGCCAAAATCCAAACTTTGCATTTAGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGTCAATGTTCCTGAAATCCCTTGTATCCCTATGCTAAGGCACCTGTACATGAAGTGGGTGAGACTCACTAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCACAGCCGTTTAAAGATTTCCTTTGCATCAGCTTGCGAACTTTTGTCATGAGGAACTGTGCAGGACCAACAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCCTTGAAATACGTGCCCTTGGTAACAGGTCTGGCATCTGCCCGTAACCTGGAACACTTGGAAATGGTTCGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCTTTCCTGGGAGGTCTCATCCAACACGTGGTTGAAGACAGCTGGAGATCAGGTGGTTTTAGGAACTTGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTATTGTCTTAGGAGCTTGCAAGAATGCCCTGGAAGTAGACCTTGGCTACCTCATCATCACTGCTGCGCGAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTTACATGAAGTTCGCATCCAGCCTTCTTTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAATTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTTTCCCCAGTTTGAAACCCTTCATCTGGGATATGTAGATGAGTTCTTGCTACAGAGCAGAATGGCGAATGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATTTGGTGAAGTATGGCTTGGCTGATGTGGTAGAAAATCCTGGTATCATTACTGATATAGGGATGAAGGCAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAATGAAGTTTTTTCCTGTATCAAATATCTGGCAATTTATAACTGTCCTCATCTACACAACCCATACAATTGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTCAGACCACTCGAGGTGGATGCGACTGGTTGATATCAACCTCGTGCGGTGCCATGCTTTGAAGCTGGATTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTGGCCAGTTTGTTGAATTATTGCCCAGCCTGGAATTTATTTCTCTGGACCAGATGTTCCGTGAGCCACCCAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGCTGTGCTCGAGTTGGTCTGAGTGCAGGAACTGGAATTGGGGTTTCCTCAGCGCTTGTCAGCAACCAGAATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAACAATGACAATGACAATAATGCTCCAAATAACAACGCCAACCTCCATGATAACAATCACCATCACCCAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GATTCGGATGACGACAATGACTTTCGTCCAGACCTACAAGCAGGAGAGGCACAATTTGCAGCCGATGCGTTGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGATGGAAGACATGGTCCAGGAAGATGGAGAACTGGTAGCCGAGAGTGGAAATGGTATGCCAGCTCACAATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGAAGTTCTTCCTGTGGATGCTGATGAGGAACAAGCAGGACCTAGTGGTCTACAACGCGTGGTAAAACCTACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCAATTGCTGATCACGATTCAGAGAGCGATGATGAAGAAGATAGTTTAGAACTCCAAGAAGTCTGGGCTCCTAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAATGGCACCCGGCGTTACTCAGAGCGGGAAGAAAAGACTGGAGACTCAGGACAGTCCAGGGAAACGGCAGTAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGGAGGAGAGCAGCTGTGAGAAAGGCTGTCAGGTGACCAGTGAGCAGATCAAAGCCGATATGAAAGCAGCTAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGATGTTTCTGAAAAGAAAAAATCCAAGGATGTCTATCCCAGCTGCAGCAGCAGCAGCAGCAGCACAGCCGCCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGCAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGCTCTTCCGAGCCGAGCCCTCCAGAAGTAGATGTATCCAGGCAGTGTGTCTGCTCCCCTGGTGGGTCAGAGGA 2294
Query 1 ----------ATGGAGGAGGGAGATGCAGAGAGTTCTGTCTGCCCCAGATGCTGCTGTCACAGGCCCCAGGAAT 64
|||||||||||||||||||||||.|||||||||||||||||||||||||.||||||||||||.|
Sbjct 2295 CTCTGAGGCCATGGAGGAGGGAGATGCAGAGAGCTCTGTCTGCCCCAGATGCTGCTGTCTCAGGCCCCAGGAGT 2368
Query 65 CCCAAAGGAGAACTAGCAGGTGTTCTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCG 138
|.||||||||||||.|||||||||||||||||||.||||||||||||||||||||||||||||||||||||.||
Sbjct 2369 CTCAAAGGAGAACTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCGCG 2442
Query 139 GATGGTACGAGATCCGCCTTTTCCTTTAGGACTCTGCCACAAGGGGGGTCTTCAGGCCCAGCACATGATGAGAG 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GATGGTACGAGATCCGCCTTTTCCTTTAGGACTCTGCCACAAGGGGGGTCTTCAGGCCCAGCACATGATGAGAG 2516
Query 213 GACTAATGGGAGTGGCTCTGGGGCTACAGGTGAGGACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGACGTGC 286
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GACTAATGGGAGTGGCTGTGGGGCTACAGGTGAGGACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGACGTGC 2590
Query 287 AGTCTAATGAAGACTACCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATCT 360
||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||.|||||
Sbjct 2591 AGTCTAATGAAGACTATCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACCGCTGATATCT 2664
Query 361 GAGTCAGAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTAC 434
|||||||||||.|||||||||||||||.|.||.|||||||||||.|||||.||.||||||||.||.||.||.||
Sbjct 2665 GAGTCAGAAGTTGCCAAAACAAAGCCATGCCATGCCATGAAACGAAAGCGAACTGCAGATAAGTCTACCAGCAC 2738
Query 435 AAGTGATCCTGTGATCGAGGATGACCATGTGCAGGTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTA 508
.|||||.||||||||.||.||||||||.||.|||||||||||||||||||||||.|||||||||||||||||.|
Sbjct 2739 CAGTGACCCTGTGATTGAAGATGACCACGTACAGGTTCTTGTATTAAAATCCAAAAATCTTGTTGGAGTCACAA 2812
Query 509 TGACCAATTGTGGAATCACAGATCTAGTGCTAAAAGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGC 582
||||||||||||||||||||||||||||.||.||||||||.||.||||||||||||||||||||||||||||||
Sbjct 2813 TGACCAATTGTGGAATCACAGATCTAGTACTGAAAGACTGCCCCAAGATGATGTTCATCCATGCTACCAGGTGC 2886
Query 583 AGGGTACTAAAACATTTAAAGGTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACT 656
||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 AGGGTACTGAAGCATTTAAAGGTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACT 2960
Query 657 GAACATGGATCAGGTACTAGACCAGATACTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAA 730
.||.|||||.||||||||||||||.|||||.||.|||||.||.|||||.|||||.|||||.|||||.|||||||
Sbjct 2961 AAATATGGACCAGGTACTAGACCAAATACTGAGGATGCCTCCGGAGAGGAACCGGATCATCTACCTGCGCCCAA 3034
Query 731 TGCAGCAGGTGGACACTCTAACTTTGGAGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATC 804
||||||||||.|||||.||||||.|||||||||||||.||.||.||.||||||||||||||||||||.||.|||
Sbjct 3035 TGCAGCAGGTAGACACACTAACTCTGGAGCAGAAGCTCTTCAGCGGGCCCTACCCCTATCACATCTGCATCATC 3108
Query 805 CATGAATTCAGTAACCCTCCCAATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACAT 878
||.||.|||||.||.||||||||.||.|||||.|||||||||||.||||..|||||||||||.|||||.|||||
Sbjct 3109 CACGAGTTCAGCAATCCTCCCAACGTGCGGAACAAGGTGCGCATCCGCAATTGGATGGACACGATAGCCAACAT 3182
Query 879 CAATCAAGAGCTCATTAAATATGAATTCTTCCCTGAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCA 952
|||||||||||||||||||||.||||||||||..|||||||||||.|.||||||.||.||||||||.|||||.|
Sbjct 3183 CAATCAAGAGCTCATTAAATACGAATTCTTCCTGGAAGCCACTCGGACTGAAGAGGATTTAAAGAAGTACCCTA 3256
Query 953 AGTACCCCTGGGGGAGAGAAATCTATACTTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGAC 1026
||||.||||||||||||||||||||.||||||||.||||||||.||||||||.||.||||||||||||||.|||
Sbjct 3257 AGTATCCCTGGGGGAGAGAAATCTACACTTTAGAGGGTGTTGTAGATGGAGCGCCGTATTCCATGATTTCCGAC 3330
Query 1027 TTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGA 1100
||||||||||||||||||.|.||..|.|||||||||||||||||.||..||||.||.||||||||.||||||||
Sbjct 3331 TTCCCTTGGCTGAGGTCACTGCGGACCGCAGAGCCCAACAGCTTTGCCAGATATGATTTTGAAGATGATGAAGA 3404
Query 1101 AAGCACTATCTATGCTCCTAGAAGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAA 1174
.|||||.||||||||||||.||||.|||||.|||.|||||||||||||.||||||||.||||||||||||||.|
Sbjct 3405 GAGCACCATCTATGCTCCTCGAAGAAAAGGGCAGTTGTCTGCAGACATTTGTATGGAGACAATAGGAGAGGAGA 3478
Query 1175 TTTCAGAGATGCGTCAGATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTC 1248
|.|||||||||||.||||||||||.|||..||||||||||||||||.||.||||||||||||||.|||||||||
Sbjct 3479 TCTCAGAGATGCGCCAGATGAAGAGGGGCATATTTCAGCGAGTAGTAGCGATTTTTATCCACTACTGTGATGTC 3552
Query 1249 AATGGAGAGCCAGTTGAAGATGACTACATT 1278
||||||||||||||||||||.|||||||||
Sbjct 3553 AATGGAGAGCCAGTTGAAGACGACTACATT 3582
