Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16008
- Subject:
- XM_006525498.1
- Aligned Length:
- 3585
- Identities:
- 1164
- Gaps:
- 2307
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGACCACGAAAGAAAAGTGCTAAAGTGTGTGTGATGGACAGTGAGGTCGCTGAGGAAATGACAGCCGATGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGAAGGACTACATGAACCAGCTGTCACATGAAGTGCTCTGTCATATCTTCAGGTACCTGCCACTACAGGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCATGTGCATGGAATGCCTCTCTCGGAAGCTAAAGGAGGCAGTCACTCTGTATCTGAGAGTTGTCAGAGTGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATCTCTGTGCAGGGCGCTGGTGGGAATATATGCCAAGTGGCTTCACAGATTCCAGTTTCCTAACCCTTTTGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGATGCCAGATGTTGAACAGCTGTATGGCCTTCACCCTAGATACCTCGAGAGGCGAAGAGTGAGGGGCCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGCTTTCAGCATCCCAGGAGTCTTGGAAGCTTTGCAAGCGTGCCCAAACTTGGTGGGTGTAGAAACATCTCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTGGAGTTGGTAGAATCCATTTGGACATATATGCCGCATGTTCATATTTTGGGGAAATTTCGTAATCGTAACGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCATTTCCGATTCCTCCTGAAAATAAACTGAAAATCCCCATAGGAGCCAAAATCCAAACTTTGCATTTAGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGTCAATGTTCCTGAAATCCCTTGTATCCCTATGCTAAGGCACCTGTACATGAAGTGGGTGAGACTCACTAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCACAGCCGTTTAAAGATTTCCTTTGCATCAGCTTGCGAACTTTTGTCATGAGGAACTGTGCAGGACCAACAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCCTTGAAATACGTGCCCTTGGTAACAGGTCTGGCATCTGCCCGTAACCTGGAACACTTGGAAATGGTTCGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCTTTCCTGGGAGGTCTCATCCAACACGTGGTTGAAGACAGCTGGAGATCAGGTGGTTTTAGGAACTTGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTATTGTCTTAGGAGCTTGCAAGAATGCCCTGGAAGTAGACCTTGGCTACCTCATCATCACTGCTGCGCGAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTTACATGAAGTTCGCATCCAGCCTTCTTTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAATTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTTTCCCCAGTTTGAAACCCTTCATCTGGGATATGTAGATGAGTTCTTGCTACAGAGCAGAATGGCGAATGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATTTGGTGAAGTATGGCTTGGCTGATGTGGTAGAAAATCCTGGTATCATTACTGATATAGGGATGAAGGCAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAATGAAGTTTTTTCCTGTATCAAATATCTGGCAATTTATAACTGTCCTCATCTACACAACCCATACAATTGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTCAGACCACTCGAGGTGGATGCGACTGGTTGATATCAACCTCGTGCGGTGCCATGCTTTGAAGCTGGATTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTGGCCAGTTTGTTGAATTATTGCCCAGCCTGGAATTTATTTCTCTGGACCAGATGTTCCGTGAGCCACCCAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGCTGTGCTCGAGTTGGTCTGAGTGCAGGAACTGGAATTGGGGTTTCCTCAGCGCTTGTCAGCAACCAGAATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAACAATGACAATGACAATAATGCTCCAAATAACAACGCCAACCTCCATGATAACAATCACCATCACCCAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GATTCGGATGACGACAATGACTTTCGTCCAGACCTACAAGCAGGAGAGGCACAATTTGCAGCCGATGCGTTGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGATGGAAGACATGGTCCAGGAAGATGGAGAACTGGTAGCCGAGAGTGGAAATGGTATGCCAGCTCACAATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGAAGTTCTTCCTGTGGATGCTGATGAGGAACAAGCAGGACCTAGTGGTCTACAACGCGTGGTAAAACCTACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCAATTGCTGATCACGATTCAGAGAGCGATGATGAAGAAGATAGTTTAGAACTCCAAGAAGTCTGGGCTCCTAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAATGGCACCCGGCGTTACTCAGAGCGGGAAGAAAAGACTGGAGACTCAGGACAGTCCAGGGAAACGGCAGCAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCCCTGGAGGAGAGCAGCTGTGAGAAAGGCTGTCAGGTGACCAGTGAGCAGATCAAAGCCGATATGAAAGCAGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGGGATGTTTCTGAAAAGAAAAAATCCAAGGATGTCTATCCCAGCTGCAGCAGCAGCAGCAGCAGCACAGCCG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCAGCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGCGGCTCTTCCGAGCCGAGCCCTCCAGAAGTAGATGTATCCAGGCAGTGTGTCTGCTCCCCTGGTGGGTCAGA 2294
Query 1 -------------ATGGAGGAGGGAGATGCAGAGAGTTCTGTCTGCCCCAGATGCTGCTGTCACAGGCCCCAGG 61
|||||||||||||||||||||||.|||||||||||||||||||||||||.|||||||||||
Sbjct 2295 GGACTCTGAGGCCATGGAGGAGGGAGATGCAGAGAGCTCTGTCTGCCCCAGATGCTGCTGTCTCAGGCCCCAGG 2368
Query 62 AATCCCAAAGGAGAACTAGCAGGTGTTCTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGC 135
|.||.||||||||||||.|||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 2369 AGTCTCAAAGGAGAACTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGC 2442
Query 136 CCGGATGGTACGAGATCCGCCTTTTCCTTTAGGACTCTGCCACAAGGGGGGTCTTCAGGCCCAGCACATGATGA 209
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GCGGATGGTACGAGATCCGCCTTTTCCTTTAGGACTCTGCCACAAGGGGGGTCTTCAGGCCCAGCACATGATGA 2516
Query 210 GAGGACTAATGGGAGTGGCTCTGGGGCTACAGGTGAGGACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGACG 283
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GAGGACTAATGGGAGTGGCTGTGGGGCTACAGGTGAGGACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGACG 2590
Query 284 TGCAGTCTAATGAAGACTACCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTA 357
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||.||
Sbjct 2591 TGCAGTCTAATGAAGACTATCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACCGCTGATA 2664
Query 358 TCTGAGTCAGAAGTAGCCAAAACAAAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAGATAAATCCACTAG 431
||||||||||||||.|||||||||||||||.|.||.|||||||||||.|||||.||.||||||||.||.||.||
Sbjct 2665 TCTGAGTCAGAAGTTGCCAAAACAAAGCCATGCCATGCCATGAAACGAAAGCGAACTGCAGATAAGTCTACCAG 2738
Query 432 TACAAGTGATCCTGTGATCGAGGATGACCATGTGCAGGTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCA 505
.||.|||||.||||||||.||.||||||||.||.|||||||||||||||||||||||.||||||||||||||||
Sbjct 2739 CACCAGTGACCCTGTGATTGAAGATGACCACGTACAGGTTCTTGTATTAAAATCCAAAAATCTTGTTGGAGTCA 2812
Query 506 CTATGACCAATTGTGGAATCACAGATCTAGTGCTAAAAGACTGTCCAAAGATGATGTTCATCCATGCTACCAGG 579
|.|||||||||||||||||||||||||||||.||.||||||||.||.|||||||||||||||||||||||||||
Sbjct 2813 CAATGACCAATTGTGGAATCACAGATCTAGTACTGAAAGACTGCCCCAAGATGATGTTCATCCATGCTACCAGG 2886
Query 580 TGCAGGGTACTAAAACATTTAAAGGTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAA 653
|||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 TGCAGGGTACTGAAGCATTTAAAGGTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAA 2960
Query 654 ACTGAACATGGATCAGGTACTAGACCAGATACTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACGCC 727
|||.||.|||||.||||||||||||||.|||||.||.|||||.||.|||||.|||||.|||||.|||||.||||
Sbjct 2961 ACTAAATATGGACCAGGTACTAGACCAAATACTGAGGATGCCTCCGGAGAGGAACCGGATCATCTACCTGCGCC 3034
Query 728 CAATGCAGCAGGTGGACACTCTAACTTTGGAGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTATT 801
|||||||||||||.|||||.||||||.|||||||||||||.||.||.||.||||||||||||||||||||.||.
Sbjct 3035 CAATGCAGCAGGTAGACACACTAACTCTGGAGCAGAAGCTCTTCAGCGGGCCCTACCCCTATCACATCTGCATC 3108
Query 802 ATCCATGAATTCAGTAACCCTCCCAATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAA 875
|||||.||.|||||.||.||||||||.||.|||||.|||||||||||.||||..|||||||||||.|||||.||
Sbjct 3109 ATCCACGAGTTCAGCAATCCTCCCAACGTGCGGAACAAGGTGCGCATCCGCAATTGGATGGACACGATAGCCAA 3182
Query 876 CATCAATCAAGAGCTCATTAAATATGAATTCTTCCCTGAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACC 949
||||||||||||||||||||||||.||||||||||..|||||||||||.|.||||||.||.||||||||.||||
Sbjct 3183 CATCAATCAAGAGCTCATTAAATACGAATTCTTCCTGGAAGCCACTCGGACTGAAGAGGATTTAAAGAAGTACC 3256
Query 950 CCAAGTACCCCTGGGGGAGAGAAATCTATACTTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCT 1023
|.|||||.||||||||||||||||||||.||||||||.||||||||.||||||||.||.||||||||||||||.
Sbjct 3257 CTAAGTATCCCTGGGGGAGAGAAATCTACACTTTAGAGGGTGTTGTAGATGGAGCGCCGTATTCCATGATTTCC 3330
Query 1024 GACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGA 1097
|||||||||||||||||||||.|.||..|.|||||||||||||||||.||..||||.||.||||||||.|||||
Sbjct 3331 GACTTCCCTTGGCTGAGGTCACTGCGGACCGCAGAGCCCAACAGCTTTGCCAGATATGATTTTGAAGATGATGA 3404
Query 1098 AGAAAGCACTATCTATGCTCCTAGAAGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGG 1171
|||.|||||.||||||||||||.||||.|||||.|||.|||||||||||||.||||||||.|||||||||||||
Sbjct 3405 AGAGAGCACCATCTATGCTCCTCGAAGAAAAGGGCAGTTGTCTGCAGACATTTGTATGGAGACAATAGGAGAGG 3478
Query 1172 AAATTTCAGAGATGCGTCAGATGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGAT 1245
|.||.|||||||||||.||||||||||.|||..||||||||||||||||.||.||||||||||||||.||||||
Sbjct 3479 AGATCTCAGAGATGCGCCAGATGAAGAGGGGCATATTTCAGCGAGTAGTAGCGATTTTTATCCACTACTGTGAT 3552
Query 1246 GTCAATGGAGAGCCAGTTGAAGATGACTACATT 1278
|||||||||||||||||||||||.|||||||||
Sbjct 3553 GTCAATGGAGAGCCAGTTGAAGACGACTACATT 3585
